rna662, rna662 (mRNA) Nannochloropsis gaditana

Overview
Namerna662
Unique Namerna662
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length908
Alignment locationCM002456.1:105133..105671 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102959g1.3164.mrna
Orig protein idgnl|cribi|Naga_102959g1.3164
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:105133..105671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102959g1gene635Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30011.1cds662Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna662rna662-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna662 ID=rna662|Name=rna662|organism=Nannochloropsis gaditana|type=mRNA|length=908bp
GCCGGTCATCATGAACCGATGATGAAAAAAGAACAGATTTCTCACCACTA
AACCCTTTGTTATGACACGCATCACAGGCTCACCGCATGCCTTACCCACG
CACGGCGACAAAATGCCTCCTGCCACGTGCTAGTGCAGCCGTGGGCATGT
ACGAAAAGGTCACTCGACGTAGTACATCGCAAGCGGCCATTGGAACTGCT
GCCTCCCCTCCCTCCACCCCAACATTTATAAAGAAAACAAGCCCAATTTT
GCCCTCCGTCACGTCACCTCCCTCAATTGAAGCTAGATACACGCGCAGCT
CTCCTCGTGGGACATCCACGGTTCATGGCAATCACACGACCGTGCTGGGG
CGGAGGCACGCCTCAGCCACTCGACTCGTCCCCGCTTGTCACCTTACCTC
GGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCC
CCGTCTGGGGCGGGCTAAGTCTGGGATTGGACCCAAAGCTGATGAATGAG
CCGTCCTCCCCTTCCTCCGTTCCCCTCCTCCCCCACCGTCAAGTACCCGA
CCACGCGCTGCGTATCACCACCGTGTCCTACATGGATTCTTCCACCTACA
TACCCTTTCCTCACAAGGACGGCATTGACGCCAGGGCCTTTCCCACCAAT
CCTGCGAATTTCAAGGTACGTGCGTCGGATATTTCCAAATACGGGGGAAC
GGGGGAAGGAAAGATGATGGGCGGTGCTCTCTCGGAAACGGCCGGCCTTC
TAGACCTTTAAATTCAAAATTTTGAGCACGAGATGGGTACTCGCGGCCTA
TTTTCGGGGCTTGCGAGACCTTGGGAGCTCTTGCGATGCCGAGAATCTTC
GACCAGGCTTTCTCCTCAATTAGCCTCCTCCCCGTCCCTCCCTCCCTCCC
TCCCTCCC
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protein sequence of rna662

>rna662-protein ID=rna662-protein|Name=rna662|organism=Nannochloropsis gaditana|type=polypeptide|length=112bp
TGVFFPFCPVYVTPASLPPSTPSSLPLFFPPSLSPPRPQSKYAAIEERIR
HRKANKGKVATKGREEGMEEVTEEGRQERGEEGREEEEEEIGRLRGRGCQ
DGVCLGMMVDED
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mRNA from alignment at CM002456.1:105133..105671-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna662 ID=rna662|Name=rna662|organism=Nannochloropsis gaditana|type=mRNA|length=539bp|location=Sequence derived from alignment at CM002456.1:105133..105671- (Nannochloropsis gaditana)
ACTGGTGTCTTTTTTCCTTTTTGTCCCGTGTACGTGACCCCTGCCTCCCT
CCCTCCCTCCACCCCTTCCTCCCTCCCTCTTTTCTTTCCTCCCTCCCTCT
CTCCCCCCCGCCCTCAGAGCAAGTACGCGGCGATCGAGGAACGGATCCGT
CATCGGAAAGCGAATAAAGGGAAAGTAGCGACGAAAGGGAGGGAGGAAGG
GATGGAGGAAGTGACGGAGGAAGGGCGACAGGAAAGGGGGGAGGAAGGGA
GGGAGGAGGAGGAGGAGGAGATCGGACGCTTGAGAGGAAGAGGGTGTCAG
GATGGGGTATGCTTAGGCATGATGGTAGACGAGGACTAGGATATGGGAGG
GAAGAAGGGGGGAGGGAGGGAGGGAGGGAGGGTGTGCATTGCGAAAGCAG
CCATCCCCCCCGCTGCATCCGAATGACAAGCAGAGAGGCTTGTGTTTCCC
CCACACATGAATGACGACATTGTAGAAATTGAAGGCCAAGAAACAACATT
ATGAGCCATACGCCGAGAAATTTGAAGGGCTCCTTCCAG
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Coding sequence (CDS) from alignment at CM002456.1:105133..105671-

>rna662 ID=rna662|Name=rna662|organism=Nannochloropsis gaditana|type=CDS|length=339bp|location=Sequence derived from alignment at CM002456.1:105133..105671- (Nannochloropsis gaditana)
ACTGGTGTCTTTTTTCCTTTTTGTCCCGTGTACGTGACCCCTGCCTCCCT
CCCTCCCTCCACCCCTTCCTCCCTCCCTCTTTTCTTTCCTCCCTCCCTCT
CTCCCCCCCGCCCTCAGAGCAAGTACGCGGCGATCGAGGAACGGATCCGT
CATCGGAAAGCGAATAAAGGGAAAGTAGCGACGAAAGGGAGGGAGGAAGG
GATGGAGGAAGTGACGGAGGAAGGGCGACAGGAAAGGGGGGAGGAAGGGA
GGGAGGAGGAGGAGGAGGAGATCGGACGCTTGAGAGGAAGAGGGTGTCAG
GATGGGGTATGCTTAGGCATGATGGTAGACGAGGACTAG
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Synonyms
Publications