EWM30011.1, cds662 (CDS) Nannochloropsis gaditana

Overview
NameEWM30011.1
Unique Namecds662
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:105333..105671 -

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Properties
Property NameValue
Protein idEWM30011.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102959g1.3164.mrna
GbkeyCDS
End range.
End range105671
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:105333..105671 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30011.1 vs. NCBI_GenBank
Match: gi|585112631|gb|EWM30011.1| (hypothetical protein Naga_102959g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 223.787 bits (569), Expect = 4.725e-74
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 TGVFFPFCPVYVTPASLPPSTPSSLPLFFPPSLSPPRPQSKYAAIEERIRHRKANKGKVATKGREEGMEEVTEEGRQERGEEGREEEEEEIGRLRGRGCQDGVCLGMMVDED 112
            TGVFFPFCPVYVTPASLPPSTPSSLPLFFPPSLSPPRPQSKYAAIEERIRHRKANKGKVATKGREEGMEEVTEEGRQERGEEGREEEEEEIGRLRGRGCQDGVCLGMMVDED
Sbjct:    1 TGVFFPFCPVYVTPASLPPSTPSSLPLFFPPSLSPPRPQSKYAAIEERIRHRKANKGKVATKGREEGMEEVTEEGRQERGEEGREEEEEEIGRLRGRGCQDGVCLGMMVDED 112
The following BLAST results are available for this feature:
BLAST of EWM30011.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112631|gb|EWM30011.1|4.725e-74100.00hypothetical protein Naga_102959g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna662rna662Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications