rna6610, rna6610 (mRNA) Nannochloropsis gaditana

Overview
Namerna6610
Unique Namerna6610
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length627
Alignment locationCM002469.1:68189..69109 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100963g1.9834.mrna
Orig protein idgnl|cribi|Naga_100963g1.9834
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:68189..69109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100963g1gene6390Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24079.1cds6594Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6610rna6610-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6610 ID=rna6610|Name=rna6610|organism=Nannochloropsis gaditana|type=mRNA|length=627bp
CTTTCGTCTGATTGCCCCGTCCAAGTCTTTCCCTCCCATGCCCACCCAAT
CCGCACGATTAAGACTCTTCCTGTCCGTATCCATTGACAGCAAGCATGCT
TTCTTCGGCTCGAGGTCGCGCACTGTCCTGTGCTTTCAACCGATCAGTGC
ACCGAAGTCGGAATCACAAGTCCCTTCTTGGCTCCTGCTCCTCCTTCACT
TTTCCTGTGGCGTGTGCACCGGTGCGAAATAGCAGCTGCAAAACCTTGGA
GAGCTTTGCCACCGTTGATCCGGAGACTTTGTCGGGCGAGAAGCCCTATC
AAGTGTACAATTTGGTCAAGGGTGGGTGGACGCTGCCCAAGTCCAGCGTC
ACGATTCCTGATCCCTTGAATGGCAAGCCTTTCCTCCAACTGCCCGACAC
TCAGGCGGACGAGATCGGTCCCTACGTGGAGGCGTTGAAGGCGGTGCCCA
AAAGTGGGCTGCACAACCCCTTTAAGGTATGTGCAAGAGAAGAAATTATC
CTTGGGTAGAGAGGAGGAAAGGGAAGAGATGGAGGGGACAGATCAGGGCG
GAGTCACGGGTGGCAACGTTTTGTAAAGGTGACTTCAAGAAAGTGTGGGA
CCGAGCGTGGAAGGCAACCACAACACG
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protein sequence of rna6610

>rna6610-protein ID=rna6610-protein|Name=rna6610|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
LLLLLRFLRPPLSPARARRHQGQHRYGPVAFKHGDGRAELIPEVGRLAPP
GPRLCAPWSPCPLLCSPPCHRPGGSGILPAGGRTDGSGRAGRCRGGQGGR
RRSLSLPSSPAGGAGGPPSTAGISVQTTAFHPGTIAAAGGYARNIGMRRG
WGKGEDEDVSAMGMEGRRPAPGAERTLCCRQKSRYKRGTETRMQVFVGEA
RF
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mRNA from alignment at CM002469.1:68189..69109-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6610 ID=rna6610|Name=rna6610|organism=Nannochloropsis gaditana|type=mRNA|length=921bp|location=Sequence derived from alignment at CM002469.1:68189..69109- (Nannochloropsis gaditana)
CTCCTCCTTCTCCTCCGCTTCCTCCGCCCTCCACTCAGCCCGGCGCGGGC
CCGGCGACACCAAGGCCAGCATCGGTATGGGCCGGTCGCCTTCAAGCACG
GTGATGGCCGTGCCGAGCTTATCCCCGAAGTTGGACGGCTTGCACCTCCA
GGACCCCGCCTGTGCGCCCCCTGGTCCCCCTGTCCTCTCCTCTGCTCCCC
CCCCTGCCACCGACCCGGAGGGAGCGGGATTCTTCCGGCAGGAGGCAGGA
CTGATGGATCTGGAAGGGCGGGGAGGTGCCGGGGGGGACAGGGAGGGAGA
AGACGGAGCCTCTCTCTCCCCTCAAGCCCTGCAGGGGGAGCCGGCGGCCC
ACCATCAACAGCAGGAATATCTGTACAAACAACAGCTTTCCACCCTGGCA
CAATTGCAGCAGCAGGAGGTTATGCACGCAACATTGGAATGAGGCGGGGG
TGGGGGAAGGGGGAGGACGAAGACGTATCAGCGATGGGAATGGAAGGAAG
GAGGCCGGCTCCGGGGGCGGAGCGTACCCTCTGTTGCCGTCAGAAGTCGA
GGTACAAACGAGGGACGGAGACACGGATGCAGGTCTTTGTGGGAGAGGCA
AGATTTTGAGCAGGGGAAAGGGGCTTCGTTTCTGGAAGGTGAAGATGGAG
CTGAGAGGATGAGGGCATGAGCCTCGAGCTTCCCGTCGATGGGAGAGTCA
GACCGTGCTTGAAGCAGCCAATTTTGTCATGTATCCTTTTTGGCAGGGAC
TAGTGTTTTCTAGCGCACGCATTCGCCGGGAGACTATTTTAATCTAAAAG
AAATTGTGGCAGTAGTTTAACTCAATGCGCCTCGAAGCGACGTTCACAGC
CTTGGTGGGAATACCTATTTTCTTCTTTAGAATGTCGTTAAATAAATATA
GAGTGCAGGGTCATTCAACCT
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Coding sequence (CDS) from alignment at CM002469.1:68189..69109-

>rna6610 ID=rna6610|Name=rna6610|organism=Nannochloropsis gaditana|type=CDS|length=609bp|location=Sequence derived from alignment at CM002469.1:68189..69109- (Nannochloropsis gaditana)
CTCCTCCTTCTCCTCCGCTTCCTCCGCCCTCCACTCAGCCCGGCGCGGGC
CCGGCGACACCAAGGCCAGCATCGGTATGGGCCGGTCGCCTTCAAGCACG
GTGATGGCCGTGCCGAGCTTATCCCCGAAGTTGGACGGCTTGCACCTCCA
GGACCCCGCCTGTGCGCCCCCTGGTCCCCCTGTCCTCTCCTCTGCTCCCC
CCCCTGCCACCGACCCGGAGGGAGCGGGATTCTTCCGGCAGGAGGCAGGA
CTGATGGATCTGGAAGGGCGGGGAGGTGCCGGGGGGGACAGGGAGGGAGA
AGACGGAGCCTCTCTCTCCCCTCAAGCCCTGCAGGGGGAGCCGGCGGCCC
ACCATCAACAGCAGGAATATCTGTACAAACAACAGCTTTCCACCCTGGCA
CAATTGCAGCAGCAGGAGGTTATGCACGCAACATTGGAATGAGGCGGGGG
TGGGGGAAGGGGGAGGACGAAGACGTATCAGCGATGGGAATGGAAGGAAG
GAGGCCGGCTCCGGGGGCGGAGCGTACCCTCTGTTGCCGTCAGAAGTCGA
GGTACAAACGAGGGACGGAGACACGGATGCAGGTCTTTGTGGGAGAGGCA
AGATTTTGA
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Synonyms
Publications