EWM24079.1, cds6594 (CDS) Nannochloropsis gaditana

Overview
NameEWM24079.1
Unique Namecds6594
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:68501..69109 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24079.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100963g1.9834.mrna
GbkeyCDS
End range.
End range69109
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:68501..69109 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24079.1 vs. NCBI_GenBank
Match: gi|585105374|gb|EWM24079.1| (hypothetical protein Naga_100963g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 394.045 bits (1011), Expect = 1.737e-138
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 
Query:    1 LLLLLRFLRPPLSPARARRHQGQHRYGPVAFKHGDGRAELIPEVGRLAPPGPRLCAPWSPCPLLCSPPCHRPGGSGILPAGGRTDGSGRAGRCRGGQGGRRRSLSLPSSPAGGAGGPPSTAGISVQTTAFHPGTIAAAGGYARNIGMRRGWGKGEDEDVSAMGMEGRRPAPGAERTLCCRQKSRYKRGTETRMQVFVGEARF 202
            LLLLLRFLRPPLSPARARRHQGQHRYGPVAFKHGDGRAELIPEVGRLAPPGPRLCAPWSPCPLLCSPPCHRPGGSGILPAGGRTDGSGRAGRCRGGQGGRRRSLSLPSSPAGGAGGPPSTAGISVQTTAFHPGTIAAAGGYARNIGMRRGWGKGEDEDVSAMGMEGRRPAPGAERTLCCRQKSRYKRGTETRMQVFVGEARF
Sbjct:    1 LLLLLRFLRPPLSPARARRHQGQHRYGPVAFKHGDGRAELIPEVGRLAPPGPRLCAPWSPCPLLCSPPCHRPGGSGILPAGGRTDGSGRAGRCRGGQGGRRRSLSLPSSPAGGAGGPPSTAGISVQTTAFHPGTIAAAGGYARNIGMRRGWGKGEDEDVSAMGMEGRRPAPGAERTLCCRQKSRYKRGTETRMQVFVGEARF 202
The following BLAST results are available for this feature:
BLAST of EWM24079.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105374|gb|EWM24079.1|1.737e-138100.00hypothetical protein Naga_100963g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6610rna6610Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications