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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101954g1.819.mrna |
| Orig protein id | gnl|cribi|Naga_101954g1.819 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:39531..40640 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6599 ID=rna6599|Name=rna6599|organism=Nannochloropsis gaditana|type=mRNA|length=432bp
ATGTTGCCCGTCCAGGTAGTTGCGCGGTGCCTGTCGGTGTGGGTCATCCA
CTCGTGGGTGGAATGGGCCCGGTCCCGCCTACGCACCAAGACGCTGCCAG
CCGCGCAAAAGTCAAACAGTGAACCCTCGACCATCCGGTGCATAGCCACC
CTGAGAAGATCTAAAGTGTCGTGCCATTCAACCGAAGGGTCCGTGGCTCT
TTTCTCATTCGACCGTCACGTTGCCAAAGGGCTAGCCGGAAAACACTCCG
CTCTTGCCACATCATCATCCCGCACGAAAGAAAAACGGGCGCGAGGCATT
CAATACAGTTCTGAGACACGGCAAGTGGTAGGAGGCGACCTGGCCGAGGT
GAAAGGGGGGCGTAGTCACCAATCATACAACACCATCCTCCTGTACGACT
TAAGGACGGATGCCTACCTTGAACGAGGATAA back to topprotein sequence of rna6599 >rna6599-protein ID=rna6599-protein|Name=rna6599|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
PPSLPPSLPPAHLRQRRERHRLHPRARPPRAPPPSLPPRLPYPSSLPLPH
HPPFQRHVLLHLSGPPFLPPALRLRLPPALRLAPVRGPEQRVPPSAGAGG
GRACISYLWCVRSGTVRVSSYASHVEGSGASALPSPDPVVGECFLPFPLP
PALGPFLPPALLLGEVPPFDFSSCPLTVRGENRSLLHRIG back to topmRNA from alignment at CM002469.1:39531..40640+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6599 ID=rna6599|Name=rna6599|organism=Nannochloropsis gaditana|type=mRNA|length=1110bp|location=Sequence derived from alignment at CM002469.1:39531..40640+ (Nannochloropsis gaditana)
cctccctccctccctccttccctccccccagctCACCTTCGCCAACGCCG
GGAGCGACATCGTCTACACCcacgtgcccgccctcctcgagctcctcctc
cttccctccctccgagaCTCCCCTACCCAagctctctccccctcccacac
caCCCGCCTTTCCAACGACACGTACTCCTTCACCTATCtggtcctccctt
cctccctcccgccctccgcctccgcctccctcccgccctccgtctgGCTC
CGGTACGGGGGCCGGAACAACGTGTGCCCCCCTCGGcaggtgccggggga
ggaagggcgtgcaTCAGCTACCTGTGGTGTGTACGCTCTGGGACCGTCCG
GGTATCGTCCTATGCTTCCCACGTGGAAGGAAGTGGAGCTTCAGCCCTTC
CCAGCCCAGACCCCGTCGTAGGGGagtgcttccttcccttccctctcccc
cccgccctcggccccttcctccctcccgccctcctcctcggggagGTTCC
TCCCTTTGACTTCTCCTCGTGCCCTCTCAcggtgaggggggaaaacaGAT
CGCTCCTGCATCGTATAGGATAGGGATAGGAGGGTGTTTtgttgcccctc
cttcccttcctggctgcctccctccctccctccctccctcccttgttgGA
CAAAGCAGGGTAGATTTTGAGCCGAAGGTGTTGAAGGCCAttgaggagaa
aagggagggagggagggaaggagggagaacggcAAGAAgcgctcctccag
caccgaAAACGTATGCGTGCATGGAAAAGGCTGTTTGTGCGATGACGTGT
Gtgcagagagaggggagggaagcatgtggaaggggaggaagacgagggca
gTCCGAGAAAAGTTCACTGATGGATGtagatggacgaggaggatggggga
agagaaagctgGAGCGGGGTCGGGTCTGGAAGACGACAACGTGCGTGTAT
AAGGTGATGAGTGTGGAAGGGagtttcgcgccattttgggGTTCGGGCAG
AGGGCCTGCCAGCGTGGACGCGTGCCTCACACCGGCGTCGAAGGTAAcgc
gaaaggaggaaacccAGAAAACACCAGAGAAAGACGCAGCGACGATACTT
TACTTCAAGA back to topCoding sequence (CDS) from alignment at CM002469.1:39531..40640+ >rna6599 ID=rna6599|Name=rna6599|organism=Nannochloropsis gaditana|type=CDS|length=573bp|location=Sequence derived from alignment at CM002469.1:39531..40640+ (Nannochloropsis gaditana)
cctccctccctccctccttccctccccccagctCACCTTCGCCAACGCCG
GGAGCGACATCGTCTACACCcacgtgcccgccctcctcgagctcctcctc
cttccctccctccgagaCTCCCCTACCCAagctctctccccctcccacac
caCCCGCCTTTCCAACGACACGTACTCCTTCACCTATCtggtcctccctt
cctccctcccgccctccgcctccgcctccctcccgccctccgtctgGCTC
CGGTACGGGGGCCGGAACAACGTGTGCCCCCCTCGGcaggtgccggggga
ggaagggcgtgcaTCAGCTACCTGTGGTGTGTACGCTCTGGGACCGTCCG
GGTATCGTCCTATGCTTCCCACGTGGAAGGAAGTGGAGCTTCAGCCCTTC
CCAGCCCAGACCCCGTCGTAGGGGagtgcttccttcccttccctctcccc
cccgccctcggccccttcctccctcccgccctcctcctcggggagGTTCC
TCCCTTTGACTTCTCCTCGTGCCCTCTCAcggtgaggggggaaaacaGAT
CGCTCCTGCATCGTATAGGATAG back to top
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