rna6597, rna6597 (mRNA) Nannochloropsis gaditana

Overview
Namerna6597
Unique Namerna6597
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length400
Alignment locationCM002469.1:34239..35016 -

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Properties
Property NameValue
Productserine threonine protein kinase
Orig transcript idgnl|cribi|Naga_102359g1.7605.mrna
Orig protein idgnl|cribi|Naga_102359g1.7605
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:34239..35016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102359g1gene6377Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6597rna6597-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24092.1cds6581Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6597 ID=rna6597|Name=rna6597|organism=Nannochloropsis gaditana|type=mRNA|length=400bp
TTCAAGCCTCACAGGGGCCATAATAAACTTTGCCTCATGTCTCATTAGTG
CTCTACTTCGCATTTCAATAACCTTTACGACCACACCAACCGGAAGTTGA
CGGCACGAAATTGAAAAGGAGCATTTGATTCCTGTTATCGTCATGTGCGA
TTCGACGACTGCCCCTTTACGAGACGAAATCGGTCTGCCATTCGCTCCGG
TGGAGAGAGCCATTGAGGCCGTGGCAGCTCAGCACAATTTTCGTGTCACA
AAACCCGCTGGAGATCTAATCAACGCCTTATTGAGCGAATTTATCCTGCA
GCTTTGCCACCAAGGGAGTGTCTCTGCGTCCAAAAAGCGTGTGGTAAACG
AAGTGCACGTGCGTACGGCCCTGGAGACTCTGTATGCAGCAAGGTTGTAG
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protein sequence of rna6597

>rna6597-protein ID=rna6597-protein|Name=rna6597|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVA
GLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEG
EGERQDAQRRRAAHTRQRGDPAR
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mRNA from alignment at CM002469.1:34239..35016-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6597 ID=rna6597|Name=rna6597|organism=Nannochloropsis gaditana|type=mRNA|length=778bp|location=Sequence derived from alignment at CM002469.1:34239..35016- (Nannochloropsis gaditana)
ATGACGCCTATCCAAGCAGCCTTTGCGGTGGCGCGACAAGGTAGGGCGGG GGGGAAGGAGGGAAGGAGGGAGGGAGGGCGTGGGGAAGGGCGGGGAAGGG GGTGACACAAGACAGCGGGTAAGTCTCGTGTCTCGCTTTCAGAGAGTCGA CTGCACCACGGGCAAGCCCTTCCCTTTCTTGCGCCTCACCACAGTCTTCC CTCCCCATCATCCTTCCTTCCCTCCCCATCATCCTTCCTTCCCTTCGCAT CATCCTTGGTTGCCCCCGGCAGGACACCGCCCTCCCCTCCCTCCCCGCAC CCCCCCCAGGCTAGCTCAATTGATTCAATTGTGTTGGCACGATGACCCTA TCCGCCGCCCAACGTTTAGTCAGGTGGTGGCGGGTTTGAAGGAGGTGCGG AGGGAAGTGTACGCCGGGAGGCAAGGAGGAGGGGCAGGATCTGGGGCAGG GGCCGGGGGAGGGGGAGGAGAGAAAGCATCCTTGCCCCCCCCTCGCCCGG CACCTGTCTCACGGTAGGCGAGGAAGGGAGGGGGAGGCTGGGGAGAGGGC AGTATGCAAGGGAGGGATGGTGAGGTGGAAGGAGATTGGAGGGGACTGCA GTTTCCTTAGGAGCGGCGGGGGATGGGAGGGCGATGGGGGGTAAGAGGGT GAGGGAGGGAGGGAGGTTGGGAGGGAGGGAGGGGCAGGGGGAGAGGGGAG GAGGGAGAAGGAGAGAGACAAGACGCACAACGGAGACGAGCAGCACACAC ACGCCAGAGGGGTGACCCAGCACGTTGA
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Coding sequence (CDS) from alignment at CM002469.1:34239..35016-

>rna6597 ID=rna6597|Name=rna6597|organism=Nannochloropsis gaditana|type=CDS|length=1116bp|location=Sequence derived from alignment at CM002469.1:34239..35016- (Nannochloropsis gaditana)
GGGGAGAGGGGAGGAGGGAGAAGGAGAGAGACAAGACGCACAACGGAGAC
GAGCAGCACACACACGCCAGAGGGGTGACCCAGCACGTTGAGACACCGCC
CTCCCCTCCCTCCCCGCACCCCCCCCAGGCTAGCTCAATTGATTCAATTG
TGTTGGCACGATGACCCTATCCGCCGCCCAACGTTTAGTCAGGTGGTGGC
GGGTTTGAAGGAGGTGCGGAGGGAAGTGTACGCCGGGAGGCAAGGAGGAG
GGGCAGGATCTGGGGCAGGGGCCGGGGGAGGGGGAGGAGAGAAAGCATCC
TTGCCCCCCCCTCGCCCGGCACCTGTCTCACGATGACGCCTATCCAAGCA
GCCTTTGCGGTGGCGCGACAAGGGGGAGAGGGGAGGAGGGAGAAGGAGAG
AGACAAGACGCACAACGGAGACGAGCAGCACACACACGCCAGAGGGGTGA
CCCAGCACGTTGAGACACCGCCCTCCCCTCCCTCCCCGCACCCCCCCCAG
GCTAGCTCAATTGATTCAATTGTGTTGGCACGATGACCCTATCCGCCGCC
CAACGTTTAGTCAGGTGGTGGCGGGTTTGAAGGAGGTGCGGAGGGAAGTG
TACGCCGGGAGGCAAGGAGGAGGGGCAGGATCTGGGGCAGGGGCCGGGGG
AGGGGGAGGAGAGAAAGCATCCTTGCCCCCCCCTCGCCCGGCACCTGTCT
CACGATGACGCCTATCCAAGCAGCCTTTGCGGTGGCGCGACAAGGGGGAG
AGGGGAGGAGGGAGAAGGAGAGAGACAAGACGCACAACGGAGACGAGCAG
CACACACACGCCAGAGGGGTGACCCAGCACGTTGAGACACCGCCCTCCCC
TCCCTCCCCGCACCCCCCCCAGGCTAGCTCAATTGATTCAATTGTGTTGG
CACGATGACCCTATCCGCCGCCCAACGTTTAGTCAGGTGGTGGCGGGTTT
GAAGGAGGTGCGGAGGGAAGTGTACGCCGGGAGGCAAGGAGGAGGGGCAG
GATCTGGGGCAGGGGCCGGGGGAGGGGGAGGAGAGAAAGCATCCTTGCCC
CCCCCTCGCCCGGCACCTGTCTCACGATGACGCCTATCCAAGCAGCCTTT
GCGGTGGCGCGACAAG
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Synonyms
Publications