EWM24092.1, cds6581 (CDS) Nannochloropsis gaditana

Overview
NameEWM24092.1
Unique Namecds6581
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:34977..35016 -
Alignment locationCM002469.1:34504..34744 -
Alignment locationCM002469.1:34239..34329 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24092.1
Productserine threonine protein kinase
Orig transcript idgnl|cribi|Naga_102359g1.7605.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:34977..35016 -
CM002469.1supercontigCM002469.1:34504..34744 -
CM002469.1supercontigCM002469.1:34239..34329 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
Homology
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|585105408|gb|EWM24092.1| (serine threonine protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 237.269 bits (604), Expect = 5.048e-79
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR 123
            MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR
Sbjct:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR 123          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|635372021|emb|CCI39983.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 80.8777 bits (198), Expect = 2.318e-15
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVR 56
            MTPIQAAFAVARQ  RP LP  TP +LA+ ++ CWH DP RRPTFS ++  +  ++
Sbjct:  452 MTPIQAAFAVARQRARPALPKHTPAKLAEFVEYCWHQDPQRRPTFSDILEAIPIIK 507          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|325180262|emb|CCA14665.1| (serine/threonine protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 79.337 bits (194), Expect = 6.034e-15
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVR 56
            MTPIQAAFAVARQ  RP LP  TP +LA+ ++ CWH DP RRP FS ++  +  ++
Sbjct:  346 MTPIQAAFAVARQHARPALPKHTPAKLAEFVEYCWHQDPQRRPAFSDIIEAIPLIK 401          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1173947888|gb|OQR96060.1| (serine/threonine protein kinase [Achlya hypogyna])

HSP 1 Score: 73.1738 bits (178), Expect = 1.930e-14
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            M+PIQAAF VARQ  RP  P  TP  L QL+++CWH DP  RPTF+Q +  L  VR +V
Sbjct:   23 MSPIQAAFTVARQQMRPAFPKDTPESLQQLVEMCWHQDPAHRPTFAQALDALPAVRTQV 81          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|669163356|ref|XP_008617240.1| (TKL protein kinase [Saprolegnia diclina VS20] >gi|530731024|gb|EQC29266.1| TKL protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 77.411 bits (189), Expect = 3.648e-14
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            M+PIQAAFAVARQ  RPP P  TP  L QL++ CWH DP +RPTF+Q++  L  VR ++
Sbjct:  627 MSPIQAAFAVARQQMRPPFPKDTPESLMQLVETCWHQDPAQRPTFAQILDVLPAVRAQL 685          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|813156620|ref|XP_012201659.1| (TKL protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641533551|gb|KDO27532.1| TKL protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 77.411 bits (189), Expect = 4.100e-14
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            M+PIQAAFAVARQ  RPP P  TP  L QL++ CWH DP +RPTF+Q++  L  VR ++
Sbjct:  629 MSPIQAAFAVARQQMRPPFPKDTPESLLQLVETCWHQDPAQRPTFAQILDVLPAVRAQL 687          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1026081484|ref|XP_016539997.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X2 [Capsicum annuum])

HSP 1 Score: 73.9442 bits (180), Expect = 6.099e-13
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            +TP+QAA  V ++G RP +P  TPP+LA+L+Q CW  DP  RP FS++V  L+++ +EV
Sbjct:  483 LTPLQAAIGVVQKGLRPTIPKHTPPKLAELLQTCWQQDPTSRPDFSEIVDILQQIAKEV 541          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1026081482|ref|XP_016539996.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X1 [Capsicum annuum])

HSP 1 Score: 73.9442 bits (180), Expect = 6.473e-13
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            +TP+QAA  V ++G RP +P  TPP+LA+L+Q CW  DP  RP FS++V  L+++ +EV
Sbjct:  488 LTPLQAAIGVVQKGLRPTIPKHTPPKLAELLQTCWQQDPTSRPDFSEIVDILQQIAKEV 546          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|697158691|ref|XP_009588109.1| (PREDICTED: serine/threonine-protein kinase STY46-like isoform X2 [Nicotiana tomentosiformis] >gi|1025266786|ref|XP_016492551.1| PREDICTED: serine/threonine-protein kinase STY46-like isoform X2 [Nicotiana tabacum])

HSP 1 Score: 73.9442 bits (180), Expect = 6.586e-13
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
            +TP+QAA  V ++G RP +P  TPPRLA+L++ CW  DP  RP FS++V  L+++ +EV
Sbjct:  423 LTPLQAAIGVVQKGLRPTIPKHTPPRLAELLETCWQQDPTSRPDFSEIVDILQQIAKEV 481          
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|763792406|gb|KJB59402.1| (hypothetical protein B456_009G253200 [Gossypium raimondii])

HSP 1 Score: 73.9442 bits (180), Expect = 6.703e-13
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSG 71
            MTP+QAA  V RQG RP LP    P+L  L+Q CW   P +RP+FS++ A L+ +  EV  GR+GG + SG
Sbjct:  486 MTPLQAALGV-RQGLRPDLPENAHPKLVDLMQRCWVATPDKRPSFSEITAQLETLFEEVKVGRRGGSSHSG 555          
The following BLAST results are available for this feature:
BLAST of EWM24092.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105408|gb|EWM24092.1|5.048e-79100.00serine threonine protein kinase [Nannochloropsis g... [more]
gi|635372021|emb|CCI39983.1|2.318e-1557.14unnamed protein product [Albugo candida][more]
gi|325180262|emb|CCA14665.1|6.034e-1555.36serine/threonine protein kinase putative [Albugo l... [more]
gi|1173947888|gb|OQR96060.1|1.930e-1455.93serine/threonine protein kinase [Achlya hypogyna][more]
gi|669163356|ref|XP_008617240.1|3.648e-1457.63TKL protein kinase [Saprolegnia diclina VS20] >gi|... [more]
gi|813156620|ref|XP_012201659.1|4.100e-1457.63TKL protein kinase [Saprolegnia parasitica CBS 223... [more]
gi|1026081484|ref|XP_016539997.1|6.099e-1349.15PREDICTED: serine/threonine-protein kinase STY46 i... [more]
gi|1026081482|ref|XP_016539996.1|6.473e-1349.15PREDICTED: serine/threonine-protein kinase STY46 i... [more]
gi|697158691|ref|XP_009588109.1|6.586e-1349.15PREDICTED: serine/threonine-protein kinase STY46-l... [more]
gi|763792406|gb|KJB59402.1|6.703e-1349.30hypothetical protein B456_009G253200 [Gossypium ra... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6597rna6597Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications