EWM24092.1, cds6581 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|585105408|gb|EWM24092.1| (serine threonine protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 237.269 bits (604), Expect = 5.048e-79 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR 123
MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR
Sbjct: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSGAGAGGGGGEKASLPPPRPAPVSRGRGEEGEGERQDAQRRRAAHTRQRGDPAR 123
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|635372021|emb|CCI39983.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 80.8777 bits (198), Expect = 2.318e-15 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVR 56
MTPIQAAFAVARQ RP LP TP +LA+ ++ CWH DP RRPTFS ++ + ++
Sbjct: 452 MTPIQAAFAVARQRARPALPKHTPAKLAEFVEYCWHQDPQRRPTFSDILEAIPIIK 507
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|325180262|emb|CCA14665.1| (serine/threonine protein kinase putative [Albugo laibachii Nc14]) HSP 1 Score: 79.337 bits (194), Expect = 6.034e-15 Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVR 56
MTPIQAAFAVARQ RP LP TP +LA+ ++ CWH DP RRP FS ++ + ++
Sbjct: 346 MTPIQAAFAVARQHARPALPKHTPAKLAEFVEYCWHQDPQRRPAFSDIIEAIPLIK 401
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1173947888|gb|OQR96060.1| (serine/threonine protein kinase [Achlya hypogyna]) HSP 1 Score: 73.1738 bits (178), Expect = 1.930e-14 Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
M+PIQAAF VARQ RP P TP L QL+++CWH DP RPTF+Q + L VR +V
Sbjct: 23 MSPIQAAFTVARQQMRPAFPKDTPESLQQLVEMCWHQDPAHRPTFAQALDALPAVRTQV 81
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|669163356|ref|XP_008617240.1| (TKL protein kinase [Saprolegnia diclina VS20] >gi|530731024|gb|EQC29266.1| TKL protein kinase [Saprolegnia diclina VS20]) HSP 1 Score: 77.411 bits (189), Expect = 3.648e-14 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
M+PIQAAFAVARQ RPP P TP L QL++ CWH DP +RPTF+Q++ L VR ++
Sbjct: 627 MSPIQAAFAVARQQMRPPFPKDTPESLMQLVETCWHQDPAQRPTFAQILDVLPAVRAQL 685
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|813156620|ref|XP_012201659.1| (TKL protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641533551|gb|KDO27532.1| TKL protein kinase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 77.411 bits (189), Expect = 4.100e-14 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
M+PIQAAFAVARQ RPP P TP L QL++ CWH DP +RPTF+Q++ L VR ++
Sbjct: 629 MSPIQAAFAVARQQMRPPFPKDTPESLLQLVETCWHQDPAQRPTFAQILDVLPAVRAQL 687
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1026081484|ref|XP_016539997.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X2 [Capsicum annuum]) HSP 1 Score: 73.9442 bits (180), Expect = 6.099e-13 Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
+TP+QAA V ++G RP +P TPP+LA+L+Q CW DP RP FS++V L+++ +EV
Sbjct: 483 LTPLQAAIGVVQKGLRPTIPKHTPPKLAELLQTCWQQDPTSRPDFSEIVDILQQIAKEV 541
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|1026081482|ref|XP_016539996.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X1 [Capsicum annuum]) HSP 1 Score: 73.9442 bits (180), Expect = 6.473e-13 Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
+TP+QAA V ++G RP +P TPP+LA+L+Q CW DP RP FS++V L+++ +EV
Sbjct: 488 LTPLQAAIGVVQKGLRPTIPKHTPPKLAELLQTCWQQDPTSRPDFSEIVDILQQIAKEV 546
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|697158691|ref|XP_009588109.1| (PREDICTED: serine/threonine-protein kinase STY46-like isoform X2 [Nicotiana tomentosiformis] >gi|1025266786|ref|XP_016492551.1| PREDICTED: serine/threonine-protein kinase STY46-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 73.9442 bits (180), Expect = 6.586e-13 Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREV 59
+TP+QAA V ++G RP +P TPPRLA+L++ CW DP RP FS++V L+++ +EV
Sbjct: 423 LTPLQAAIGVVQKGLRPTIPKHTPPRLAELLETCWQQDPTSRPDFSEIVDILQQIAKEV 481
BLAST of EWM24092.1 vs. NCBI_GenBank
Match: gi|763792406|gb|KJB59402.1| (hypothetical protein B456_009G253200 [Gossypium raimondii]) HSP 1 Score: 73.9442 bits (180), Expect = 6.703e-13 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 1 MTPIQAAFAVARQGHRPPLPPRTPPRLAQLIQLCWHDDPIRRPTFSQVVAGLKEVRREVYAGRQGGGAGSG 71
MTP+QAA V RQG RP LP P+L L+Q CW P +RP+FS++ A L+ + EV GR+GG + SG
Sbjct: 486 MTPLQAALGV-RQGLRPDLPENAHPKLVDLMQRCWVATPDKRPSFSEITAQLETLFEEVKVGRRGGSSHSG 555 The following BLAST results are available for this feature:
BLAST of EWM24092.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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