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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100660g1.6275.mrna |
| Orig protein id | gnl|cribi|Naga_100660g1.6275 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:832860..834202 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6577 ID=rna6577|Name=rna6577|organism=Nannochloropsis gaditana|type=mRNA|length=1866bp
CCTTTGAAATTTATACTCTCCATCCAACGCTCCCTGTTTCTCCCTCCCTC
TCCTTCCTTTCTCCCTTTCTCAGGTCCTTTCGCAGCTGAACAAGCGCCCC
CTCCTACGGGCCTTAGAGCGGGCAGTGGCAAAGGATGGCTTGAAAGCGGT
CTTCACCTTCCGCCTGTCCCCCCTGGTCCCCGCACTGCCCATTGGGGGCT
ACAACTACCTCTACGGCGTCTCCAGGTCGCTTGATCCCTCTTTTCCCGAA
GTCTTTTCTCTTTGTTCCCGCGGTCCCTCTTTTCCCGAGTCTGGGAGCAT
GGTGTGCTCTTTCTGGCGTGCCCTACATGCCCTCCTTTTCTCCCTCCCTC
CCTCCTTCCCTGCCTTTTCCCCTTCTTCTCCCCGATACTTTATTCCTGCA
GCCTTTCTTCATCCCCTACACAAGGTCCCTATCTTATGACTGTTGCTCCT
TAATCAAAGCTCTGCGTCACTTGGAAGTCCCTTCTTTGTCACAAAGCCTA
ATTTTATCTCCCTCCCTTCCTCCCACTCTCCCTCCCGCCCTTCCTCCTTC
CCTCCCTCCCTCCCTTCCTCACGCTCCTTCCAGCGTCTCAATCTTCGACT
TCCTCGTAGGAATATTTGCCGGGAGCCTAAAACCTTACTTTCTCGACGCC
TACTTGGGGGTGTGGGGCAAGGACTTGCTGAGTGTGAACGAGGCGGGGGG
GGAGGGCGGGGGAGGGGTCGATATAGCCCAGACCGTCATCCTGTCCGGGA
CCTTCTTCCTCCTCGTGCTGGTGGGGGCCTTGGCGGGGCAGATTGCAGGG
CGTGCCTTTGACGAGGCGAAACAAGAAGCGCTCATGACCGTGCCGCTCAA
AGAAGGGGAAACAGAGGCACAATGGGACTGGTGGACAATGATGGGCGTAG
AGCGACCGAAAGGGAATGTCTGGACGGAGGAATGGGGGAGGCTGGAGACC
GCTGTGGAGGACGAATGGAAGAAGTTGATGGAGGACTTAGCCGCGCAGGA
GGAGGAAACAGGGGAGAGGCAAAGAGACCGCATCTCCCCCCACCCTGCCT
CCTATACTACGAGAAGAGGAGGAAAGGAAGGGAAGGGACGGGAGGAGCAA
GAGATCCCGGGAGGGAAAGACGAGGACATCCTGGCAGTGGTCCCCCCCAA
CACGCCAGAGGGCACTGTGCATCGGACAAGCGTAGCCTCCCAGCTCGTGG
GTATTCTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACGGGGCGCTTG
AGTGAGGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCTCGCCGCTTC
CTCCGCTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACATTCCTCCCC
CCTCCCTTCAATGAGCGACTTGAAGGGGGAGAGACGCAGGAAGCATACCG
GGATGGAGGAGATGGGTATACATACTTATAAAACGGACTTACAGGGCTTG
GGAACCCCTCAATTTTTCAAGCAGCCTGTGCGTGAGAGAATCGATCTACC
CAAAATGCAATAAGGGGAGGACGGTCTTGTCCCTGGCACCATTCAGGCCG
ACAGGAGCATAGGGTAACCTTTCGAGGTGTAAATAAAAACGACAGGATCA
GCAGTAACAGCACTATGCCACAACTCGCGAGAAGAACGTCGATCCAAGTC
TAAGAAAAGCACCTGCCACTCATGTAGATTACAAAATAAGGAGCGGAAAG
TTGGGGTCGAAGGGAGAGGAGCTTCCAGTAGAGGCAGTGATGTCCGCCAA
CAAGCATGAAAGGGTAAAAGATGAAAGCATAAATTTTTAGGAGACAGATC
TTAAAAACGCTTAGTTACCGGATTAAGTGTCCTGCATGCAAGCTACCGCT
GATGGCTTTGAGACCT back to topprotein sequence of rna6577 >rna6577-protein ID=rna6577-protein|Name=rna6577|organism=Nannochloropsis gaditana|type=polypeptide|length=239bp
MSLYCHAGQAPGPSSYCLPLPPPSLLFVPPPVMRTSVPSRFPRPLKMKMR
DSPRQKHAQWKEDEMELWKARRGISRSFLKPVGMLTRRRDRLTRARMAKG
LDPTGGKKEEVKNAVVATALLVAVVTAVARLGGRAAVMSMMGLDILADAG
VTGKLTSVLDMVEGMGKAERLLIFFSLWVVAKNLCLDGLALVLGLSSGIL
FGGVWEGALSSTVCATGASFIGFMLARTYLREQVRKREC back to topmRNA from alignment at CM002468.1:832860..834202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6577 ID=rna6577|Name=rna6577|organism=Nannochloropsis gaditana|type=mRNA|length=1343bp|location=Sequence derived from alignment at CM002468.1:832860..834202- (Nannochloropsis gaditana)
ATGAGCCTCTACTGCCACGCTGGCCAGGCACCTGGACCCTCCTCGTATTG
TCTTCCCCTCCCTCCACCCTCCCTCCTCTTCGTTCCACCTCCTGTCATGC
GGACCTCAGTTCCCTCCCGGTTCCCCCGACCTTTGAAGATGAAAATGCGC
GATTCCCCACGACAAAAGCACGCACAATGGAAAGAGGATGAAATGGAGTT
GTGGAAGGCCAGGAGAGGGATCAGTCGAAGCTTCTTAAAACCTGTGGGTA
TGCTCACGAGACGAAGAGACCGCCTCACACGTGCTCGAATGGGTAGGTAC
GAGGAAATGGCAATGGAACGCGAAAGAGAGGGCTATAGGAACAATAAAAT
GGAACAAAAATTCGCAGCAAGAATGTCTTCGCACCTTTTAGAACAAGGGT
GTCGAGCGAAGTGTACGCGCAGACATAGTAATGAGGGCGCTTTTGTGATT
TCCCGAAACTCACCTGCTTCACCTTGGCAATAAACACATCTCAGCAAAAG
GACTGGACCCGACCGGAGGTAAAAAAGAGGAGGTGAAGAATGCCGTGGTC
GCTACAGCCTTACTGGTAGCTGTCGTCACGGCTGTGGCACGGTGCGGAGG
GAGGGAAGGAGGGAGAGAGGGAGGGAGGGAGGGAGAGAGGGATTAAAGGA
GGGAGGAAGAAGTGAAGGAAGAACTGGACAAAGAGAATAGAATAAGGCGT
CATGTACTGTGTCATGGTTCGGTGCCTTCCTCCGATCGCCCACCTCTCTT
TTCCCCCTTGCTCTGGCCCTTGGTCCCCATCCTCTCATTAAGATCCACCA
TCGTCTCAATCCGCCCGCCCGCCCTCCCTGACCTCCTCCCTCATAGGCTG
GGTGGACGCGCGGCCGTCATGTCGATGATGGGCCTGGACATACTCGCGGA
TGCGGGAGTGACGGGCAAATTGACGAGTGTCTTAGACATGGTAGAGGGGA
TGGGGAAGGCTGAGAGGCTTCTGATTTTTTTTTCTCTGTGGGTGGTGGCC
AAGAACCTCTGCCTGGACGGCTTGGCCCTGGTGAGGAAGGGAGGGATGGA
AGGAGGAAAAATTAGAAGCGGGCAGGGGAGTAGCTACAGGAGAGGGGAGG
GCGGAGGGCGGACCACTCTCTAACTTCCTTGCGGTCGAGGCGCTAGCCCC
GGGGCTCATGTGTTCTTTTCTAATTGCCTCCTCCCCGTACCTAAAGGTGC
TGGGGTTGTCGAGCGGCATTCTGTTTGGAGGGGTGTGGGAAGGGGCGCTC
TCTTCCACAGTCTGCGCCACTGGGGCTTCTTTCATTGGTTTCATGTTGGC
GCGGACCTATTTGCGGGAGCAGGTGAGAAAAAGAGAGTGTTAG back to topCoding sequence (CDS) from alignment at CM002468.1:832860..834202- >rna6577 ID=rna6577|Name=rna6577|organism=Nannochloropsis gaditana|type=CDS|length=2880bp|location=Sequence derived from alignment at CM002468.1:832860..834202- (Nannochloropsis gaditana)
GTGCTGGGGTTGTCGAGCGGCATTCTGTTTGGAGGGGTGTGGGAAGGGGC
GCTCTCTTCCACAGTCTGCGCCACTGGGGCTTCTTTCATTGGTTTCATGT
TGGCGCGGACCTATTTGCGGGAGCAGGTGAGAAAAAGAGAGTGTTAGGCT
GGGTGGACGCGCGGCCGTCATGTCGATGATGGGCCTGGACATACTCGCGG
ATGCGGGAGTGACGGGCAAATTGACGAGTGTCTTAGACATGGTAGAGGGG
ATGGGGAAGGCTGAGAGGCTTCTGATTTTTTTTTCTCTGTGGGTGGTGGC
CAAGAACCTCTGCCTGGACGGCTTGGCCCTGCAAAAGGACTGGACCCGAC
CGGAGGTAAAAAAGAGGAGGTGAAGAATGCCGTGGTCGCTACAGCCTTAC
TGGTAGCTGTCGTCACGGCTGTGGCACGATGAGCCTCTACTGCCACGCTG
GCCAGGCACCTGGACCCTCCTCGTATTGTCTTCCCCTCCCTCCACCCTCC
CTCCTCTTCGTTCCACCTCCTGTCATGCGGACCTCAGTTCCCTCCCGGTT
CCCCCGACCTTTGAAGATGAAAATGCGCGATTCCCCACGACAAAAGCACG
CACAATGGAAAGAGGATGAAATGGAGTTGTGGAAGGCCAGGAGAGGGATC
AGTCGAAGCTTCTTAAAACCTGTGGGTATGCTCACGAGACGAAGAGACCG
CCTCACACGTGCTCGAATGGGTGCTGGGGTTGTCGAGCGGCATTCTGTTT
GGAGGGGTGTGGGAAGGGGCGCTCTCTTCCACAGTCTGCGCCACTGGGGC
TTCTTTCATTGGTTTCATGTTGGCGCGGACCTATTTGCGGGAGCAGGTGA
GAAAAAGAGAGTGTTAGGCTGGGTGGACGCGCGGCCGTCATGTCGATGAT
GGGCCTGGACATACTCGCGGATGCGGGAGTGACGGGCAAATTGACGAGTG
TCTTAGACATGGTAGAGGGGATGGGGAAGGCTGAGAGGCTTCTGATTTTT
TTTTCTCTGTGGGTGGTGGCCAAGAACCTCTGCCTGGACGGCTTGGCCCT
GCAAAAGGACTGGACCCGACCGGAGGTAAAAAAGAGGAGGTGAAGAATGC
CGTGGTCGCTACAGCCTTACTGGTAGCTGTCGTCACGGCTGTGGCACGAT
GAGCCTCTACTGCCACGCTGGCCAGGCACCTGGACCCTCCTCGTATTGTC
TTCCCCTCCCTCCACCCTCCCTCCTCTTCGTTCCACCTCCTGTCATGCGG
ACCTCAGTTCCCTCCCGGTTCCCCCGACCTTTGAAGATGAAAATGCGCGA
TTCCCCACGACAAAAGCACGCACAATGGAAAGAGGATGAAATGGAGTTGT
GGAAGGCCAGGAGAGGGATCAGTCGAAGCTTCTTAAAACCTGTGGGTATG
CTCACGAGACGAAGAGACCGCCTCACACGTGCTCGAATGGGTGCTGGGGT
TGTCGAGCGGCATTCTGTTTGGAGGGGTGTGGGAAGGGGCGCTCTCTTCC
ACAGTCTGCGCCACTGGGGCTTCTTTCATTGGTTTCATGTTGGCGCGGAC
CTATTTGCGGGAGCAGGTGAGAAAAAGAGAGTGTTAGGCTGGGTGGACGC
GCGGCCGTCATGTCGATGATGGGCCTGGACATACTCGCGGATGCGGGAGT
GACGGGCAAATTGACGAGTGTCTTAGACATGGTAGAGGGGATGGGGAAGG
CTGAGAGGCTTCTGATTTTTTTTTCTCTGTGGGTGGTGGCCAAGAACCTC
TGCCTGGACGGCTTGGCCCTGCAAAAGGACTGGACCCGACCGGAGGTAAA
AAAGAGGAGGTGAAGAATGCCGTGGTCGCTACAGCCTTACTGGTAGCTGT
CGTCACGGCTGTGGCACGATGAGCCTCTACTGCCACGCTGGCCAGGCACC
TGGACCCTCCTCGTATTGTCTTCCCCTCCCTCCACCCTCCCTCCTCTTCG
TTCCACCTCCTGTCATGCGGACCTCAGTTCCCTCCCGGTTCCCCCGACCT
TTGAAGATGAAAATGCGCGATTCCCCACGACAAAAGCACGCACAATGGAA
AGAGGATGAAATGGAGTTGTGGAAGGCCAGGAGAGGGATCAGTCGAAGCT
TCTTAAAACCTGTGGGTATGCTCACGAGACGAAGAGACCGCCTCACACGT
GCTCGAATGGGTGCTGGGGTTGTCGAGCGGCATTCTGTTTGGAGGGGTGT
GGGAAGGGGCGCTCTCTTCCACAGTCTGCGCCACTGGGGCTTCTTTCATT
GGTTTCATGTTGGCGCGGACCTATTTGCGGGAGCAGGTGAGAAAAAGAGA
GTGTTAGGCTGGGTGGACGCGCGGCCGTCATGTCGATGATGGGCCTGGAC
ATACTCGCGGATGCGGGAGTGACGGGCAAATTGACGAGTGTCTTAGACAT
GGTAGAGGGGATGGGGAAGGCTGAGAGGCTTCTGATTTTTTTTTCTCTGT
GGGTGGTGGCCAAGAACCTCTGCCTGGACGGCTTGGCCCTGCAAAAGGAC
TGGACCCGACCGGAGGTAAAAAAGAGGAGGTGAAGAATGCCGTGGTCGCT
ACAGCCTTACTGGTAGCTGTCGTCACGGCTGTGGCACGATGAGCCTCTAC
TGCCACGCTGGCCAGGCACCTGGACCCTCCTCGTATTGTCTTCCCCTCCC
TCCACCCTCCCTCCTCTTCGTTCCACCTCCTGTCATGCGGACCTCAGTTC
CCTCCCGGTTCCCCCGACCTTTGAAGATGAAAATGCGCGATTCCCCACGA
CAAAAGCACGCACAATGGAAAGAGGATGAAATGGAGTTGTGGAAGGCCAG
GAGAGGGATCAGTCGAAGCTTCTTAAAACCTGTGGGTATGCTCACGAGAC
GAAGAGACCGCCTCACACGTGCTCGAATGG back to top
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