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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101247g1.2176.mrna |
| Orig protein id | gnl|cribi|Naga_101247g1.2176 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:829810..832580 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6576 ID=rna6576|Name=rna6576|organism=Nannochloropsis gaditana|type=mRNA|length=711bp
ATGAAAAAAAAGAATGGACAGGAAATAGGACGAAAAGGAGGCATGGAAGC
ACGTGAAACACTGGATTTTCTTTCGGGTGCCATGCGGTCCTTCTTCTACC
TCCTATACCTATGCATCTTCTTCGTCGTTGCTTCCATCAATGCCTTTGTA
CCCTCCACTCCTGCTCCTGTACCTTTTCCTTCTACTTCCTCTTTGACACG
TAACGCTCAAATGCTGGGACGTCGCCATGGGCGTGTCCTCACACAGGCCA
AGAAACGCGGTGGAGCAGCCTCGGGCCCGCAGAGCGTGACAGGGGAGTCT
TTGAGAGGGTTCACAAAGGTTTTAGACGTGGGAAGCGAGCTGGCCGATGC
TGAAGGGAGTCAGAAAGCCGTCGGCCCTCTGAAGGACGACAAATTTCTTC
TCCTTATCAGACGGAAGGAAGGGCGAGTCAGTGCAATCGACGCCAATTGT
GGCCGGTGCAAGTTCCCGCTCTTAAAGGGCAAAGTCTCGGAAGACCCCAG
TGTGGAGGATGACGAGGACAAGGGAATCATCACCTGTCCATTGTGCGCCG
TGCGTTTCTCCCTGGCCAGTGGTCTCGTCACGGGTGCTCAAGCCGACAAC
GTACTCCAGCGTGTCTCCGCCTCCTTTTTCAGCAAGCAGATCGCATCGGG
CCTCAAAACCTACGCCGCCGCAGCCGGCACGGACGGGAGTGTGTATGCGA
AGCTCCGGTAG back to topprotein sequence of rna6576 >rna6576-protein ID=rna6576-protein|Name=rna6576|organism=Nannochloropsis gaditana|type=polypeptide|length=345bp
MPSFSPSLPPSLPFPLLLPDTLFLQPFFIPYTRSLSYDCCSLIKALRHLE
VPSLSQSLILSPSLPPTLPPALPPSLPPSLPHAPSSVSIFDFLVGIFAGS
LKPYFLDAYLGVWGKDLLSVNEAGGEGGGGVDIAQTVILSGTFFLLVLVG
ALAGQIAGRAFDEAKQEALMTVPLKEGETEAQWDWWTMMGVERPKGNVWT
EEWGRLETAVEDEWKKLMEDLAAQEEETGERQRDRISPHPASYTTRRGGK
EGKGREEQEIPGGKDEDILAVVPPNTPEGTVHRTSVASQLVGILLFPFVL
LGGATGRLSEALSSSPSRLSTLAASSAPSEEEGEEGVDIPPPSLQ back to topmRNA from alignment at CM002468.1:829810..832580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6576 ID=rna6576|Name=rna6576|organism=Nannochloropsis gaditana|type=mRNA|length=2771bp|location=Sequence derived from alignment at CM002468.1:829810..832580- (Nannochloropsis gaditana)
CCTTTGAAATTTATACTCTCCATCCAACGCTCCCTGTTTCTCCCTCCCTC
TCCTTCCTTTCTCCCTTTCTCAGGTCCTTTCGCAGCTGAACAAGCGCCCC
CTCCTACGGGCCTTAGAGCGGGCAGTGGCAAAGGATGGCTTGAAAGCGGT
CTTCACCTTCCGCCTGTCCCCCCTGGTCCCCGCACTGCCCATTGGGGGCT
ACAACTACCTCTACGGCGTCTCCAGGTCGCTTGATCCCTCTTTTCCCGAA
GTCTTTTCTCTTTGTTCCCGCGGTCCCTCTTTTCCCGAGTCTGGGAGCAT
GGTGTGCTCTTTCTGGCGTGCCCTACATGCCCTCCTTTTCTCCCTCCCTC
CCTCCTTCCCTGCCTTTTCCCCTTCTTCTCCCCGATACTTTATTCCTGCA
GCCTTTCTTCATCCCCTACACAAGGTCCCTATCTTATGACTGTTGCTCCT
TAATCAAAGCTCTGCGTCACTTGGAAGTCCCTTCTTTGTCACAAAGCCTA
ATTTTATCTCCCTCCCTTCCTCCCACTCTCCCTCCCGCCCTTCCTCCTTC
CCTCCCTCCCTCCCTTCCTCACGCTCCTTCCAGCGTCTCAATCTTCGACT
TCCTCGTAGGAATATTTGCCGGGAGCCTAAAACCTTACTTTCTCGGTAGG
GGTCAAGGGAGCGGGGGGAAGGGAAAGAGGGGATCAAAGCACATGGCGTG
TCTGATTCACGCCCTGGTGACACCCATTCATGGGCAAGCGCCGACGCGTC
TCACCCTACCTCATTCACGCCATGGTGACACCCATTCATGGGCAAGCGCC
GACGCGTCTCACCTTACCTCTCTCCCACCTTCCACGCTTTCCCCCCCGCA
TCCCTTCCTAGACGCCTACTTGGGGGTGTGGGGCAAGGACTTGCTGAGTG
TGAACGAGGCGGGGGGGGAGGGCGGGGGAGGGGTCGATATAGCCCAGACC
GTCATCCTGTCCGGGACCTTCTTCCTCCTCGTGCTGGTGGGGGCCTTGGC
GGGGCAGGTAGGTGGAAGGAGAAGAATACAGGCCCGAGAAAGAGGAAGGA
GAACGGATGTGCAGCCTTGCGGATGGCTCCTTGCTCGGCGGGCTGACAGC
GCTCCCCCCCCCCCGAACGCACCCTTCCCTTTCTGTCCCCCTGCCTTCCT
TCCCTTTCTGCCTCTTCTCCCGGGTGCTAGATTGCAGGGCGTGCCTTTGA
CGAGGCGAAACAAGAAGCGCTCATGACCGTGCCGCTCAAAGAAGGGGAAA
CAGAGGTACGACGACCCCGCCCCTCCCCCCTCCCCCTGCGCCACCCTCCC
GTCGCTTCCCACCCATTTTCCCTGTCCATCCATGCCTGACGCATATTTTG
GTTTTTTGCGGGATGGTTTTGATCCCCCGTGTCATGCGGCGGCCTGAGCC
AGTCCCGACGTTGAAGGACCTTATCCATTTCCCTCATCGCTCCCCCTCTC
CCCCCCCCCCTTTCCCCCCCCCTCCTTGCCAGGCACAATGGGACTGGTGG
ACAATGATGGGCGTAGAGCGACCGAAAGGGAATGTCTGGACGGAGGAATG
GGGGAGGCTGGAGACCGCTGTGGAGGTATGACGGGGACGGAGAGGGACAG
GGGGAAAGAGGAAAGAAAAGTCGGAGGAGAAGAGAGAGAGGGCGGCGGGC
GACGGGGTGTTTGGCCAGGCTTTTTTGATATTTGTATGTTGTTTTGTGAC
AGGACGAATGGAAGAAGTTGATGGAGGACTTAGCCGCGCAGGAGGAGGAA
ACAGGGGAGAGGCAAAGAGACCGCATCTCCCCCCACCCTGCCTCCTATAC
TACGAGAAGAGGAGGAAAGGAAGGGAAGGGACGGGAGGAGCAAGAGATCC
CGGGAGGGAAAGACGAGGACATCCTGGCAGTGGTCCCCCCCAACACGCCA
GAGGGCACTGTGCATCGGACAAGCGTAGCCTCCCAGGTAAGAGGAGGGAG
GAACAGGGGTTTAGTTGAAAGAGGAGAGACGATATCTGTCGACGTCATCC
TCGTGCCACGGCATGGGTGGGCCTCTATCCTCCCTCTCTGCCATCTTTTT
GCTCCCGATCCAATGCATCCTCCCATCCTTTTTTCATCTTCGAACCAGCT
CGTGGGTATTCTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACGGGGC
GCTTGAGTGAGGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCTCGCC
GCTTCCTCCGCTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACATTCC
TCCCCCCTCCCTTCAATGAGCGACTTGAAGGGGGAGAGACGCAGGAAGCA
TACCGGGATGGAGGAGATGGGTATACATACTTATAAAACGGACTTACAGG
GCTTGGGAACCCCTCAATTTTTCAAGCAGCCTGTGCGTGAGAGAATCGAT
CTACCCAAAATGCAATAAGGGGAGGACGGTCTTGTCCCTGGCACCATTCA
GGCCGACAGGAGCATAGGGTAACCTTTCGAGGTGTAAATAAAAACGACAG
GATCAGCAGTAACAGCACTATGCCACAACTCGCGAGAAGAACGTCGATCC
AAGTCTAAGAAAAGCACCTGCCACTCATGTAGATTACAAAATAAGGAGCG
GAAAGTTGGGGTCGAAGGGAGAGGAGCTTCCAGTAGAGGCAGTGATGTCC
GCCAACAAGCATGAAAGGGTAAAAGATGAAAGCATAAATTTTTAGGAGAC
AGATCTTAAAAACGCTTAGTTACCGGATTAAGTGTCCTGCATGCAAGCTA
CCGCTGATGGCTTTGAGACCT back to topCoding sequence (CDS) from alignment at CM002468.1:829810..832580- >rna6576 ID=rna6576|Name=rna6576|organism=Nannochloropsis gaditana|type=CDS|length=6228bp|location=Sequence derived from alignment at CM002468.1:829810..832580- (Nannochloropsis gaditana)
CTCGTGGGTATTCTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACGGG
GCGCTTGAGTGAGGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCTCG
CCGCTTCCTCCGCTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACATT
CCTCCCCCCTCCCTTCAATGAGACGAATGGAAGAAGTTGATGGAGGACTT
AGCCGCGCAGGAGGAGGAAACAGGGGAGAGGCAAAGAGACCGCATCTCCC
CCCACCCTGCCTCCTATACTACGAGAAGAGGAGGAAAGGAAGGGAAGGGA
CGGGAGGAGCAAGAGATCCCGGGAGGGAAAGACGAGGACATCCTGGCAGT
GGTCCCCCCCAACACGCCAGAGGGCACTGTGCATCGGACAAGCGTAGCCT
CCCAGGCACAATGGGACTGGTGGACAATGATGGGCGTAGAGCGACCGAAA
GGGAATGTCTGGACGGAGGAATGGGGGAGGCTGGAGACCGCTGTGGAGAT
TGCAGGGCGTGCCTTTGACGAGGCGAAACAAGAAGCGCTCATGACCGTGC
CGCTCAAAGAAGGGGAAACAGAGACGCCTACTTGGGGGTGTGGGGCAAGG
ACTTGCTGAGTGTGAACGAGGCGGGGGGGGAGGGCGGGGGAGGGGTCGAT
ATAGCCCAGACCGTCATCCTGTCCGGGACCTTCTTCCTCCTCGTGCTGGT
GGGGGCCTTGGCGGGGCAGATGCCCTCCTTTTCTCCCTCCCTCCCTCCTT
CCCTGCCTTTTCCCCTTCTTCTCCCCGATACTTTATTCCTGCAGCCTTTC
TTCATCCCCTACACAAGGTCCCTATCTTATGACTGTTGCTCCTTAATCAA
AGCTCTGCGTCACTTGGAAGTCCCTTCTTTGTCACAAAGCCTAATTTTAT
CTCCCTCCCTTCCTCCCACTCTCCCTCCCGCCCTTCCTCCTTCCCTCCCT
CCCTCCCTTCCTCACGCTCCTTCCAGCGTCTCAATCTTCGACTTCCTCGT
AGGAATATTTGCCGGGAGCCTAAAACCTTACTTTCTCGCTCGTGGGTATT
CTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACGGGGCGCTTGAGTGA
GGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCTCGCCGCTTCCTCCG
CTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACATTCCTCCCCCCTCC
CTTCAATGAGACGAATGGAAGAAGTTGATGGAGGACTTAGCCGCGCAGGA
GGAGGAAACAGGGGAGAGGCAAAGAGACCGCATCTCCCCCCACCCTGCCT
CCTATACTACGAGAAGAGGAGGAAAGGAAGGGAAGGGACGGGAGGAGCAA
GAGATCCCGGGAGGGAAAGACGAGGACATCCTGGCAGTGGTCCCCCCCAA
CACGCCAGAGGGCACTGTGCATCGGACAAGCGTAGCCTCCCAGGCACAAT
GGGACTGGTGGACAATGATGGGCGTAGAGCGACCGAAAGGGAATGTCTGG
ACGGAGGAATGGGGGAGGCTGGAGACCGCTGTGGAGATTGCAGGGCGTGC
CTTTGACGAGGCGAAACAAGAAGCGCTCATGACCGTGCCGCTCAAAGAAG
GGGAAACAGAGACGCCTACTTGGGGGTGTGGGGCAAGGACTTGCTGAGTG
TGAACGAGGCGGGGGGGGAGGGCGGGGGAGGGGTCGATATAGCCCAGACC
GTCATCCTGTCCGGGACCTTCTTCCTCCTCGTGCTGGTGGGGGCCTTGGC
GGGGCAGATGCCCTCCTTTTCTCCCTCCCTCCCTCCTTCCCTGCCTTTTC
CCCTTCTTCTCCCCGATACTTTATTCCTGCAGCCTTTCTTCATCCCCTAC
ACAAGGTCCCTATCTTATGACTGTTGCTCCTTAATCAAAGCTCTGCGTCA
CTTGGAAGTCCCTTCTTTGTCACAAAGCCTAATTTTATCTCCCTCCCTTC
CTCCCACTCTCCCTCCCGCCCTTCCTCCTTCCCTCCCTCCCTCCCTTCCT
CACGCTCCTTCCAGCGTCTCAATCTTCGACTTCCTCGTAGGAATATTTGC
CGGGAGCCTAAAACCTTACTTTCTCGCTCGTGGGTATTCTCCTTTTCCCC
TTCGTGCTCCTTGGGGGCGCAACGGGGCGCTTGAGTGAGGCCCTCTCCTC
GTCACCCTCACGCCTCAGCACTCTCGCCGCTTCCTCCGCTCCATCTGAAG
AGGAGGGAGAGGAGGGGGTTGACATTCCTCCCCCCTCCCTTCAATGAGAC
GAATGGAAGAAGTTGATGGAGGACTTAGCCGCGCAGGAGGAGGAAACAGG
GGAGAGGCAAAGAGACCGCATCTCCCCCCACCCTGCCTCCTATACTACGA
GAAGAGGAGGAAAGGAAGGGAAGGGACGGGAGGAGCAAGAGATCCCGGGA
GGGAAAGACGAGGACATCCTGGCAGTGGTCCCCCCCAACACGCCAGAGGG
CACTGTGCATCGGACAAGCGTAGCCTCCCAGGCACAATGGGACTGGTGGA
CAATGATGGGCGTAGAGCGACCGAAAGGGAATGTCTGGACGGAGGAATGG
GGGAGGCTGGAGACCGCTGTGGAGATTGCAGGGCGTGCCTTTGACGAGGC
GAAACAAGAAGCGCTCATGACCGTGCCGCTCAAAGAAGGGGAAACAGAGA
CGCCTACTTGGGGGTGTGGGGCAAGGACTTGCTGAGTGTGAACGAGGCGG
GGGGGGAGGGCGGGGGAGGGGTCGATATAGCCCAGACCGTCATCCTGTCC
GGGACCTTCTTCCTCCTCGTGCTGGTGGGGGCCTTGGCGGGGCAGATGCC
CTCCTTTTCTCCCTCCCTCCCTCCTTCCCTGCCTTTTCCCCTTCTTCTCC
CCGATACTTTATTCCTGCAGCCTTTCTTCATCCCCTACACAAGGTCCCTA
TCTTATGACTGTTGCTCCTTAATCAAAGCTCTGCGTCACTTGGAAGTCCC
TTCTTTGTCACAAAGCCTAATTTTATCTCCCTCCCTTCCTCCCACTCTCC
CTCCCGCCCTTCCTCCTTCCCTCCCTCCCTCCCTTCCTCACGCTCCTTCC
AGCGTCTCAATCTTCGACTTCCTCGTAGGAATATTTGCCGGGAGCCTAAA
ACCTTACTTTCTCGCTCGTGGGTATTCTCCTTTTCCCCTTCGTGCTCCTT
GGGGGCGCAACGGGGCGCTTGAGTGAGGCCCTCTCCTCGTCACCCTCACG
CCTCAGCACTCTCGCCGCTTCCTCCGCTCCATCTGAAGAGGAGGGAGAGG
AGGGGGTTGACATTCCTCCCCCCTCCCTTCAATGAGACGAATGGAAGAAG
TTGATGGAGGACTTAGCCGCGCAGGAGGAGGAAACAGGGGAGAGGCAAAG
AGACCGCATCTCCCCCCACCCTGCCTCCTATACTACGAGAAGAGGAGGAA
AGGAAGGGAAGGGACGGGAGGAGCAAGAGATCCCGGGAGGGAAAGACGAG
GACATCCTGGCAGTGGTCCCCCCCAACACGCCAGAGGGCACTGTGCATCG
GACAAGCGTAGCCTCCCAGGCACAATGGGACTGGTGGACAATGATGGGCG
TAGAGCGACCGAAAGGGAATGTCTGGACGGAGGAATGGGGGAGGCTGGAG
ACCGCTGTGGAGATTGCAGGGCGTGCCTTTGACGAGGCGAAACAAGAAGC
GCTCATGACCGTGCCGCTCAAAGAAGGGGAAACAGAGACGCCTACTTGGG
GGTGTGGGGCAAGGACTTGCTGAGTGTGAACGAGGCGGGGGGGGAGGGCG
GGGGAGGGGTCGATATAGCCCAGACCGTCATCCTGTCCGGGACCTTCTTC
CTCCTCGTGCTGGTGGGGGCCTTGGCGGGGCAGATGCCCTCCTTTTCTCC
CTCCCTCCCTCCTTCCCTGCCTTTTCCCCTTCTTCTCCCCGATACTTTAT
TCCTGCAGCCTTTCTTCATCCCCTACACAAGGTCCCTATCTTATGACTGT
TGCTCCTTAATCAAAGCTCTGCGTCACTTGGAAGTCCCTTCTTTGTCACA
AAGCCTAATTTTATCTCCCTCCCTTCCTCCCACTCTCCCTCCCGCCCTTC
CTCCTTCCCTCCCTCCCTCCCTTCCTCACGCTCCTTCCAGCGTCTCAATC
TTCGACTTCCTCGTAGGAATATTTGCCGGGAGCCTAAAACCTTACTTTCT
CGCTCGTGGGTATTCTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACG
GGGCGCTTGAGTGAGGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCT
CGCCGCTTCCTCCGCTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACA
TTCCTCCCCCCTCCCTTCAATGAGACGAATGGAAGAAGTTGATGGAGGAC
TTAGCCGCGCAGGAGGAGGAAACAGGGGAGAGGCAAAGAGACCGCATCTC
CCCCCACCCTGCCTCCTATACTACGAGAAGAGGAGGAAAGGAAGGGAAGG
GACGGGAGGAGCAAGAGATCCCGGGAGGGAAAGACGAGGACATCCTGGCA
GTGGTCCCCCCCAACACGCCAGAGGGCACTGTGCATCGGACAAGCGTAGC
CTCCCAGGCACAATGGGACTGGTGGACAATGATGGGCGTAGAGCGACCGA
AAGGGAATGTCTGGACGGAGGAATGGGGGAGGCTGGAGACCGCTGTGGAG
ATTGCAGGGCGTGCCTTTGACGAGGCGAAACAAGAAGCGCTCATGACCGT
GCCGCTCAAAGAAGGGGAAACAGAGACGCCTACTTGGGGGTGTGGGGCAA
GGACTTGCTGAGTGTGAACGAGGCGGGGGGGGAGGGCGGGGGAGGGGTCG
ATATAGCCCAGACCGTCATCCTGTCCGGGACCTTCTTCCTCCTCGTGCTG
GTGGGGGCCTTGGCGGGGCAGATGCCCTCCTTTTCTCCCTCCCTCCCTCC
TTCCCTGCCTTTTCCCCTTCTTCTCCCCGATACTTTATTCCTGCAGCCTT
TCTTCATCCCCTACACAAGGTCCCTATCTTATGACTGTTGCTCCTTAATC
AAAGCTCTGCGTCACTTGGAAGTCCCTTCTTTGTCACAAAGCCTAATTTT
ATCTCCCTCCCTTCCTCCCACTCTCCCTCCCGCCCTTCCTCCTTCCCTCC
CTCCCTCCCTTCCTCACGCTCCTTCCAGCGTCTCAATCTTCGACTTCCTC
GTAGGAATATTTGCCGGGAGCCTAAAACCTTACTTTCTCGCTCGTGGGTA
TTCTCCTTTTCCCCTTCGTGCTCCTTGGGGGCGCAACGGGGCGCTTGAGT
GAGGCCCTCTCCTCGTCACCCTCACGCCTCAGCACTCTCGCCGCTTCCTC
CGCTCCATCTGAAGAGGAGGGAGAGGAGGGGGTTGACATTCCTCCCCCCT
CCCTTCAATGAGACGAATGGAAGAAGTTGATGGAGGACTTAGCCGCGCAG
GAGGAGGAAACAGGGGAGAGGCAAAGAGACCGCATCTCCCCCCACCCTGC
CTCCTATACTACGAGAAGAGGAGGAAAGGAAGGGAAGGGACGGGAGGAGC
AAGAGATCCCGGGAGGGAAAGACGAGGACATCCTGGCAGTGGTCCCCCCC
AACACGCCAGAGGGCACTGTGCATCGGACAAGCGTAGCCTCCCAGGCACA
ATGGGACTGGTGGACAATGATGGGCGTAGAGCGACCGAAAGGGAATGTCT
GGACGGAGGAATGGGGGAGGCTGGAGACCGCTGTGGAGATTGCAGGGCGT
GCCTTTGACGAGGCGAAACAAGAAGCGCTCATGACCGTGCCGCTCAAAGA
AGGGGAAACAGAGACGCCTACTTGGGGGTGTGGGGCAAGGACTTGCTGAG
TGTGAACGAGGCGGGGGGGGAGGGCGGGGGAGGGGTCGATATAGCCCAGA
CCGTCATCCTGTCCGGGACCTTCTTCCTCCTCGTGCTGGTGGGGGCCTTG
GCGGGGCAGATGCCCTCCTTTTCTCCCTCCCTCCCTCCTTCCCTGCCTTT
TCCCCTTCTTCTCCCCGATACTTTATTCCTGCAGCCTTTCTTCATCCCCT
ACACAAGGTCCCTATCTTATGACTGTTGCTCCTTAATCAAAGCTCTGCGT
CACTTGGAAGTCCCTTCTTTGTCACAAAGCCTAATTTTATCTCCCTCCCT
TCCTCCCACTCTCCCTCCCGCCCTTCCTCCTTCCCTCCCTCCCTCCCTTC
CTCACGCTCCTTCCAGCGTCTCAATCTTCGACTTCCTCGTAGGAATATTT
GCCGGGAGCCTAAAACCTTACTTTCTCG back to top
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