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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101164g1.9045.mrna |
| Orig protein id | gnl|cribi|Naga_101164g1.9045 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:786015..787358 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6555 ID=rna6555|Name=rna6555|organism=Nannochloropsis gaditana|type=mRNA|length=910bp
AGGAGGAGGAGGAGGAAGGAGAAGAAAAACGCTCGACCTGCTTCTTTCCC
CGCCTTCACCTTCTCTTTCCCTACCTTCCTTCCCCTCCTCGGCCTCCCCA
TCCTTTGTTCCACAGCCATCAAGGCCTCGAACCCCTTCCCTTCCCATCAT
CTCTCTATTCCCGACTGGCGAACTCTCCTCATGAAAGCCCTCGCCCTCCC
TTCCTCCCCCCCGGCCTCTGCATCGGGCCAGGATCCTCCCTCCTGCCTGA
CTCCTCCCACCCGGTACTCGGCTTTCGAGAACATTCTTCTCCTTCTGTCC
CTGCAGGAGATGAAAGTCCTCTTCCCGGAGGTGGTGGGGCGGGAGGGCGG
GAAGGAGGTGTGGGTCCGGGAGCTGTTGCAGACACGACCCGTGGTGGTGG
AGGCTATGACGCGGACGTGGGAGGGAAAGGGAGGAAGAAGGAGGGCAAAT
GGAGGGGAGGAGGTAAAGCAGGAGGAGGGAGAAGGGCAAGGGATGATGGC
ATTTTTCGGATTGATTTTTCCGGAAGAGGCCACCGCGGATATCCAAAGGC
ATTTATTTGACGCGCAGGAATCGTTTGCGAAGGAGGCATGCAGGAATTTG
GTGGGGCTTTGAAGGAAGAGAAAGAAGATAAAAAATATGAGATAGAGAAA
AAGATCTAAAGGAATGTTGAGTGATGAAGGGGCATTCGACAGGGACGCAT
GCGCATAGGACGGGGAGAGCGGATGCATGCCAGTAGAAATGAAGGAGAAG
GGATCTCCTTGTGTACCATGGGTCTCAACATGTCAATAATTGATAAAGTA
AGCATGAAGTCAATGTTTATTGTTCATGGGCAGCTTTTTTGGACCCGATT
GGTTAAACTGGAAATAAAATACGTTCCCACACGAAGGGAAAGCTGGTCGA
AGGTCTCTGG back to topprotein sequence of rna6555 >rna6555-protein ID=rna6555-protein|Name=rna6555|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MGGRKKCLQKATHMHTDTRSNGSTQKHSSSLPPPPSIPVLSFPYPSRETF
QARYLEKYHPCLLRRAAQYYLPKTLALCGKGEGEPTGFVDFLRDSLPPST
VLELSCTPRGKPFSGAAAHAQTLPVPLSTFLLLFRHAHRPTAPSRGMARG
KK back to topmRNA from alignment at CM002468.1:786015..787358- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6555 ID=rna6555|Name=rna6555|organism=Nannochloropsis gaditana|type=mRNA|length=1344bp|location=Sequence derived from alignment at CM002468.1:786015..787358- (Nannochloropsis gaditana)
ATGGGAGGGAGGAAAAAATGCTTACAGAAGGTAAAGTCTTAGAAGAACCA
GTACCAATTTATGTAAAATTTGAAAGGTTTCCTCTTTAGACGCGTCTTTG
TAGGCGTGAATATCTGGAAAAGGTGTGATCTTGACGTTCTAAGGCGTATC
AAGGAGGAAACGGGGGGGTACGCCCGCCTCTCCCAGTCTATGTAAGAAGT
GCAACATTACCCATACCTTCAAGGAACATGCGAAAGGCCACTGTGCATTC
CCTCACACTCGAAACCATCCACATTTGACAGGCCACCCACATGCACACAG
ATACCAGGAGCAACGGCAGCACCCAAAAGCATTCTTCCTCCCTGCCGCCC
CCTCCCTCCATCCCTGTGCTTTCCTTTCCGTATCCTTCAAGGGAGACATT
TCAAGCCCGCTATTTGGAAAAATATCATCCTTGTCTTTTGAGACGAGCGG
CACAATACTACCTGCCCAAAACCTTGGCATTGTGCGGTAAAGGAGAAGGC
GAACCCACAGGATTTGTTGATTTTCTAAGGGACTCTCTGCCACCAAGCAC
AGGTGTGGTTTTCGGCCGTACCGACTGTATTACCTCCTCTTTTCTTTCTC
CTTCCTTAATCTTTTTGGGACTTTCTGTTTCAAGTATGGCAAAATCGATA
AGCGTACTTTCCCTGCGGCCATTTCCGTGCATTTATCTTTCTCCACTTCC
TTCTCCAATCTCGAACTGCTCCCTGCTAGGCTTTCCTTCTTCCCTCGCCT
TCTTTCCCTCTTCATCGACTTCTCCATTTCCTTCTCCCTTCCTTTTCAAT
TTGCACGACACTTTGTCTCACAAGCACGGTCCCCCGACCACTGTTTTGCA
TCCACGGCAACTTTTTCGGGTATGCACCAACCGACCTCCTCCAACCCCTC
CACTCCCTTCCCCTCCCCTTCCTGATCCATCACTTCAGTTCTAGAGCTGT
CGTGTACGCCGAGGGGGAAGCCGTTCTCGGGAGCTGCTGCCCACGCCCAG
ACTCTTCCTGTTCCCCTCTCTACCTTCCTCCTCCTCTTCCGGCACGCCCA
CCGGCCCACTGCACCGTCTCGTGGCATGGCGCGGGTGAGGGATGCGGAGG
GAAGGAGGGAGGATGAAGGCAAAGAGAAGGGGAGGGAAGGTGCTGCGGAT
AAGAGGGTGGTGGATCTGGAGGGAACAGGTAGGAAACGCGGTTGTGATGA
GCAAGGAGGGAGTGCGAACGGCTCTCACAAAAGGACAACGAAGGCAGATT
GCCAGAAGTGTGATGAGGAGGGAAGGGGAAGCATTGCCGGTACGAGGACA
CCACGGGAGAGAATTGATGGGAATGAACAAAGGGGAAAAAGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:786015..787358- >rna6555 ID=rna6555|Name=rna6555|organism=Nannochloropsis gaditana|type=CDS|length=1836bp|location=Sequence derived from alignment at CM002468.1:786015..787358- (Nannochloropsis gaditana)
GGGAAAAAGTGATTCTAGAGCTGTCGTGTACGCCGAGGGGGAAGCCGTTC
TCGGGAGCTGCTGCCCACGCCCAGACTCTTCCTGTTCCCCTCTCTACCTT
CCTCCTCCTCTTCCGGCACGCCCACCGGCCCACTGCACCGTCTCGTGGCA
TGGCGCGGGCCACCCACATGCACACAGATACCAGGAGCAACGGCAGCACC
CAAAAGCATTCTTCCTCCCTGCCGCCCCCTCCCTCCATCCCTGTGCTTTC
CTTTCCGTATCCTTCAAGGGAGACATTTCAAGCCCGCTATTTGGAAAAAT
ATCATCCTTGTCTTTTGAGACGAGCGGCACAATACTACCTGCCCAAAACC
TTGGCATTGTGCGGTAAAGGAGAAGGCGAACCCACAGGATTTGTTGATTT
TCTAAGGGACTCTCTGCCACCAAGCACAGATGGGAGGGAGGAAAAAATGC
TTACAGAAGGGGAAAAAGTGATTCTAGAGCTGTCGTGTACGCCGAGGGGG
AAGCCGTTCTCGGGAGCTGCTGCCCACGCCCAGACTCTTCCTGTTCCCCT
CTCTACCTTCCTCCTCCTCTTCCGGCACGCCCACCGGCCCACTGCACCGT
CTCGTGGCATGGCGCGGGCCACCCACATGCACACAGATACCAGGAGCAAC
GGCAGCACCCAAAAGCATTCTTCCTCCCTGCCGCCCCCTCCCTCCATCCC
TGTGCTTTCCTTTCCGTATCCTTCAAGGGAGACATTTCAAGCCCGCTATT
TGGAAAAATATCATCCTTGTCTTTTGAGACGAGCGGCACAATACTACCTG
CCCAAAACCTTGGCATTGTGCGGTAAAGGAGAAGGCGAACCCACAGGATT
TGTTGATTTTCTAAGGGACTCTCTGCCACCAAGCACAGATGGGAGGGAGG
AAAAAATGCTTACAGAAGGGGAAAAAGTGATTCTAGAGCTGTCGTGTACG
CCGAGGGGGAAGCCGTTCTCGGGAGCTGCTGCCCACGCCCAGACTCTTCC
TGTTCCCCTCTCTACCTTCCTCCTCCTCTTCCGGCACGCCCACCGGCCCA
CTGCACCGTCTCGTGGCATGGCGCGGGCCACCCACATGCACACAGATACC
AGGAGCAACGGCAGCACCCAAAAGCATTCTTCCTCCCTGCCGCCCCCTCC
CTCCATCCCTGTGCTTTCCTTTCCGTATCCTTCAAGGGAGACATTTCAAG
CCCGCTATTTGGAAAAATATCATCCTTGTCTTTTGAGACGAGCGGCACAA
TACTACCTGCCCAAAACCTTGGCATTGTGCGGTAAAGGAGAAGGCGAACC
CACAGGATTTGTTGATTTTCTAAGGGACTCTCTGCCACCAAGCACAGATG
GGAGGGAGGAAAAAATGCTTACAGAAGGGGAAAAAGTGATTCTAGAGCTG
TCGTGTACGCCGAGGGGGAAGCCGTTCTCGGGAGCTGCTGCCCACGCCCA
GACTCTTCCTGTTCCCCTCTCTACCTTCCTCCTCCTCTTCCGGCACGCCC
ACCGGCCCACTGCACCGTCTCGTGGCATGGCGCGGGCCACCCACATGCAC
ACAGATACCAGGAGCAACGGCAGCACCCAAAAGCATTCTTCCTCCCTGCC
GCCCCCTCCCTCCATCCCTGTGCTTTCCTTTCCGTATCCTTCAAGGGAGA
CATTTCAAGCCCGCTATTTGGAAAAATATCATCCTTGTCTTTTGAGACGA
GCGGCACAATACTACCTGCCCAAAACCTTGGCATTGTGCGGTAAAGGAGA
AGGCGAACCCACAGGATTTGTTGATTTTCTAAGGGACTCTCTGCCACCAA
GCACAGATGGGAGGGAGGAAAAAATGCTTACAGAAG back to top
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