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Properties
| Property Name | Value |
|---|
| Product | zinc finger ccch domain-containing protein 63 |
| Orig transcript id | gnl|cribi|Naga_100391g4.3406.mrna |
| Orig protein id | gnl|cribi|Naga_100391g4.3406 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:91647..94019 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna655 ID=rna655|Name=rna655|organism=Nannochloropsis gaditana|type=mRNA|length=1748bp
AGCTCTCTGATATACTCTGTATCATTCGTCCCATCGAAATGCTTGCAGTA
TATTTTACTAAGGTTGCATGTTAAGTTACAGGCGAAGACTTGAAATAACC
TCCTGGTTCTGCTCATCCCAATCTACGTACAGACACACTAACACCACCCT
GTCATTTCCCCATATCGCAGCTCCCGAGATATGCCCGAACTACCCGAGGT
CGCTGCGTTAGCCTCAGCCATTAAAAAGGAGGTCATTGGTCGAAGGCTTG
TCCATGTGCTGACCAAGGAACAAGGTGGGGGGCCACGACACGGGTTGTAC
GATGACCTGGTTTTTGGAAAGGCCGACGAGCAGGAAGTACATCGTTCAAT
GGAAGGTCGGGTATTGACAGCTGTAGGACGTAGAGGCAAACATCTTTGGA
TGGAGCTCTGTGATTCCTTCCCTTCTTGCAGCCAAGGTAGAAATCACAGA
GGCAGCGCCATCCCATCAAAAGCCTCAAAGACAATGGATGACGACACACG
CTTTGTACTCTTTCACATGGGCATGACGGGTTCCTTGGTCTTTCAACACG
TGGCTATCCCTCAATACCGCTCGTTCGCCCTGGATGTCACCGAAGGTTGG
CCCCCGAAGCATTGTAAAGCCGAATTTGTATTTGAGGAGTCCCCAAAAGA
AGGCGACAGGAACAACGAGCTCCGCTTGGCCTTTTGCGACCAACGGCGAT
GGGGCCGTATACAAATCCTCCCTGCTGGTGTCGTGGATCCACGGACGGAA
TCACCACTGAAGGAGCTGGCGCCTGACGCATGGATGGAACGCCCTGACTT
GGCGGTCTTTGCGGAGAGACTGAAGGGGACCGACATACCGGTGAAAGCCG
CCCTGCTGGATCAACATCGCATCGTGTGTGGCGTGGGAAATTGGGTGGCA
GACGAGGTATTGTACCAGGCAGGCGCGGATCCCGCCAAAAAATGCAGCGT
TTTGAAAGAGGAGGAAGTCCGCCGGGTGTGGGAGATGTTGGCCCATGTGT
GTGGAACAGCCTGTGCTGTAAATGGTCGGAGCGAGGCCTTTCCGTCTGAT
TGGCTCTTTCACTTTCGATGGGCGAAATCCAAAAAAGACAAAGCCGGAGT
GCGGGGTCCAGATGGCCGCCGAGTAGTGTTTGAGACCGTGGGGGGTCGCA
CAACTGCGATAGTACCCTCGGTGCAGCGGATTAAGGGAGGGAGAATAAAG
GATAAAGTAGAAGGCGAGGTTGTGGAGGAACAAGAAAAAGTAGGTAAAGG
TAGCAGGGCGCAATCAGGATCGACAAGGGCGAAGAAGGTGATCAAGATTG
AGGGAGAAAATAATGACACCGAAACGAGCGAGAAGGAAAGAGGTAAAAGG
ACCAAACCAATAAATTACGGAGCTGCGGCTCGTAAAGAGACCAAGACACG
AAAAAAGATACCAGGGAGCTCACCATCGGGAGCCAAAGTTCGTCAAGGTA
CAAAACAGAGAAGCGCAGGAAAGGAAGCAGAAAATGCATCATGTACAGCT
CACGCTGAACCACGGAGGAGCCCCCGAGCTAGACCAGCTGGCAAGAAATA
GATGCAGCAAACAGGAGAAGAGCATTCTCAGAAGTGTTCAATAAATAGAA
TACAGGAATGTGGTGACATCCTGGACTGTTTTTCAGAGCAGAGTATCGAT
GAGTATTTCTTTCCCTCCCCTGGAAAGTATCCGTACGTGACTGAAGAAAT
CCTAGCTCAACTTCTCAAGCCAATTTCCTACTCAAATGTCTTACGAAA back to topprotein sequence of rna655 >rna655-protein ID=rna655-protein|Name=rna655|organism=Nannochloropsis gaditana|type=polypeptide|length=492bp
MSDEARANERCHHYISSSKVARRGEAAVHASSLLQQHKKKKPARHLLSWD
SPVLLTPSKGGVIGRGGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWG
PSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSW
TPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLV
GRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGED
GRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGT
IRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQS
FLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSD
PAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREG
GGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPAVGIGGGGA back to topmRNA from alignment at CM002456.1:91647..94019+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna655 ID=rna655|Name=rna655|organism=Nannochloropsis gaditana|type=mRNA|length=2373bp|location=Sequence derived from alignment at CM002456.1:91647..94019+ (Nannochloropsis gaditana)
ATGAGCGATGAAGCGAGGGCAAACGAGAGGTGCCGCCGGCTTTCCATAAA
CCACAAGTCATGTCACAAATGTCAGCAAGCCACCATTACGGCGCCTATTT
TTGTCGAATAAGCGTTGCCTGCAACCTTGCAAAATTCACGGACATTTCTT
TTCTGACAGGTGTCATCATTATATTTCTTCCAGCAAAGTTGCAAGAAGGG
GCGAGGCCGCGGTGCATGCAAGCTCTCTCCTACAGCAgcacaaaaagaag
aaacCGGCGAGGCATTTACTTTCCTGGGATAGTCCCGTGCTTTTAACACC
GAGTAAAGGAGGCGTAATAGGCCGTTCAAGGATCCCAAGCAGGACCGGAG
GACCCGGTGTAGCTTCTATAGAAGCAAAATGAACGGAGGGGGCCGCGgga
cgtggggaggaggtggaggtgggcaccaaggaggaggtggaggaagggga
ggaggaggacgcaccGGCGGGAGCGGCTATCGCTTTGGTCGCGGTGGACG
AAGGTGCGTAGGAAAGACCATGCAAGTGTTTTTGCCGGTGAGCCGTGACT
TGGGCCTGAATGCCTTCAGGCAAAATTCCGGGAGGCAGGACGCGGTCACG
GGATGTCCTATAAATGTGCCCTCCGACCCCGTAATTTCCACCTTCAGCTA
CTTCCGGACTGCAACATCGTTGTTCTGTGTCTTGTTGACTGTTGTCGCGA
CTCTTATAGATGCGTTTTCCGTCTTTCTGCCCCCTCACCTCCACATGCTC
CTGTTCGTTTCCTTACCTTTCGCCCCAATCCTAcagaggcggcggacgtg
gGCACTCGGGCCGAGGTGGACCAGGGGTGAACCAAGCAGGACAAGGCGCC
CCTTTTCAATGCAAGCATACCCTGGACGGGACTTGCTCGTGGGGCCCATC
CCGGTGTCGGTACGTGCATGGGGTCGATTTCCATGCCAACGGCGTGGATT
TGGAGGCGCACAAAGGCGCCATCCGAGGCTTGGCCAGCGATGCGAACTGC
TTGTACACgttcggggaggacggaatCATCAAGACATACAGCTGGACCCC
AGGTAGGGGggtagggcgggggggaaggggaaggccctCGAGTGACGTAG
CCCATGGCGCCCGGCGTTGGCATATTGACGCGGGCATGGTCGGCATGTTC
CCTTTATTTCCCACCCTTCGTCAGGCACGGGCATCACGGGTTGCAAGGAG
CAAAACGGTGGGGGTCCGGGGAGtttcttcaccacctccgACCCCACCCA
CGCCTTCTATTTCTACGGCTTTCGGCAGCCTTTGGTGCCAGGCCTGAGCT
CGGAGACCAGCTTGGTGGGCCGGGCGCAAATGTTTTTCAACAACGCCTCC
ACCGACTTGACCGTCTCGGACGACTGCCCCTACACCGACCCGCGTAAAGT
GCTGGCCTGTGTGGCGTGGGAGAtgcccgctccttccccccctcatATCT
TcacggcgggggaggacggacgcATCTATTCCTGGTCGTACAACGCCGAA
CAAGCCCGGTTTGTGGTGGGGGCGACGTACGTAGGGCACACGCGCCCGGT
GACGGCCCTGATCTTGGCAGCGACCGAAAACCCACCTTTGCTGTACTCGG
CGGGCTTAGACGGAACGATCCGGTGCTGGAACTGCGCCAGTCATGCCTTG
GAATGGACGAGCACGGCCGTCGGGGTTTTCCGCCGGCTGTCCGAGCCTCC
ACAGCCACACGAAGGGCATGTGGAAGGGATCACGGACATGTGCTCGCTGG
TCTGCGAAGGGCAGTCCTTCCTGGCCACCAGCAGCCAGGATGGGAGCGTG
CGGATTTGGAGCATCCAGGGGGGGAATCTGGGCGTGACCTTACCCCTGGA
TTTTCCCACGGGCGCAGCGGTAAAGCTGTGTCAAGTcgcggcaggagggg
agggggggggaagcgaccCGGCGGGCTTAGGCCCTCCGTCGTTTTTGGTG
GTCGCTTATGAAAGCGGGCACATGGTTTTCTGGACTTTACCCGGCTTGGA
AACCTACTTGGTGATCGATCCACCCTACGCGGGGAAACCGGGGggtaggg
cgggagggcgggaaggaggtggggcctATGTCACATCCTTGGTCACATTA
AATCCGGGTATCATAGCGACCGGGTCTTCAGACGGCGTATTGAAGGTATG
GTCGGTGCATCGCCCTGCAGTGGGAataggagggggaggggcgtaAGCCA
AAACCGCGGTAAGTTGAACCGGTAAGCTTGCTTCAGATCTCTAGGGGAGA
GGCTAATGAAAGCCCCGTGAGGCTTCAAAGAGTCAATGTCTCCAGCGGAG
TAGGTAAAGTCTTTCGGGCGGAACTTGCAGTGTCGCGAAGGTGAAAGAAA
CAAGTTCTCAACTGGGAGGAGTT back to topCoding sequence (CDS) from alignment at CM002456.1:91647..94019+ >rna655 ID=rna655|Name=rna655|organism=Nannochloropsis gaditana|type=CDS|length=5916bp|location=Sequence derived from alignment at CM002456.1:91647..94019+ (Nannochloropsis gaditana)
ATGAGCGATGAAGCGAGGGCAAACGAGAGGTGTCATCATTATATTTCTTC
CAGCAAAGTTGCAAGAAGGGGCGAGGCCGCGGTGCATGCAAGCTCTCTCC
TACAGCAgcacaaaaagaagaaacCGGCGAGGCATTTACTTTCCTGGGAT
AGTCCCGTGCTTTTAACACCGAGTAAAGGAGGCGTAATAGGCCgcggcgg
acgtggGCACTCGGGCCGAGGTGGACCAGGGGTGAACCAAGCAGGACAAG
GCGCCCCTTTTCAATGCAAGCATACCCTGGACGGGACTTGCTCGTGGGGC
CCATCCCGGTGTCGGTACGTGCATGGGGTCGATTTCCATGCCAACGGCGT
GGATTTGGAGGCGCACAAAGGCGCCATCCGAGGCTTGGCCAGCGATGCGA
ACTGCTTGTACACgttcggggaggacggaatCATCAAGACATACAGCTGG
ACCCCAGGCACGGGCATCACGGGTTGCAAGGAGCAAAACGGTGGGGGTCC
GGGGAGtttcttcaccacctccgACCCCACCCACGCCTTCTATTTCTACG
GCTTTCGGCAGCCTTTGGTGCCAGGCCTGAGCTCGGAGACCAGCTTGGTG
GGCCGGGCGCAAATGTTTTTCAACAACGCCTCCACCGACTTGACCGTCTC
GGACGACTGCCCCTACACCGACCCGCGTAAAGTGCTGGCCTGTGTGGCGT
GGGAGAtgcccgctccttccccccctcatATCTTcacggcgggggaggac
ggacgcATCTATTCCTGGTCGTACAACGCCGAACAAGCCCGGTTTGTGGT
GGGGGCGACGTACGTAGGGCACACGCGCCCGGTGACGGCCCTGATCTTGG
CAGCGACCGAAAACCCACCTTTGCTGTACTCGGCGGGCTTAGACGGAACG
ATCCGGTGCTGGAACTGCGCCAGTCATGCCTTGGAATGGACGAGCACGGC
CGTCGGGGTTTTCCGCCGGCTGTCCGAGCCTCCACAGCCACACGAAGGGC
ATGTGGAAGGGATCACGGACATGTGCTCGCTGGTCTGCGAAGGGCAGTCC
TTCCTGGCCACCAGCAGCCAGGATGGGAGCGTGCGGATTTGGAGCATCCA
GGGGGGGAATCTGGGCGTGACCTTACCCCTGGATTTTCCCACGGGCGCAG
CGGTAAAGCTGTGTCAAGTcgcggcaggaggggagggggggggaagcgac
cCGGCGGGCTTAGGCCCTCCGTCGTTTTTGGTGGTCGCTTATGAAAGCGG
GCACATGGTTTTCTGGACTTTACCCGGCTTGGAAACCTACTTGGTGATCG
ATCCACCCTACGCGGGGAAACCGGGGggtagggcgggagggcgggaagga
ggtggggcctATGTCACATCCTTGGTCACATTAAATCCGGGTATCATAGC
GACCGGGTCTTCAGACGGCGTATTGAAGGTATGGTCGGTGCATCGCCCTG
CAGTGGGAataggagggggaggggcgtaAATGAGCGATGAAGCGAGGGCA
AACGAGAGGTGTCATCATTATATTTCTTCCAGCAAAGTTGCAAGAAGGGG
CGAGGCCGCGGTGCATGCAAGCTCTCTCCTACAGCAgcacaaaaagaaga
aacCGGCGAGGCATTTACTTTCCTGGGATAGTCCCGTGCTTTTAACACCG
AGTAAAGGAGGCGTAATAGGCCgcggcggacgtggGCACTCGGGCCGAGG
TGGACCAGGGGTGAACCAAGCAGGACAAGGCGCCCCTTTTCAATGCAAGC
ATACCCTGGACGGGACTTGCTCGTGGGGCCCATCCCGGTGTCGGTACGTG
CATGGGGTCGATTTCCATGCCAACGGCGTGGATTTGGAGGCGCACAAAGG
CGCCATCCGAGGCTTGGCCAGCGATGCGAACTGCTTGTACACgttcgggg
aggacggaatCATCAAGACATACAGCTGGACCCCAGGCACGGGCATCACG
GGTTGCAAGGAGCAAAACGGTGGGGGTCCGGGGAGtttcttcaccacctc
cgACCCCACCCACGCCTTCTATTTCTACGGCTTTCGGCAGCCTTTGGTGC
CAGGCCTGAGCTCGGAGACCAGCTTGGTGGGCCGGGCGCAAATGTTTTTC
AACAACGCCTCCACCGACTTGACCGTCTCGGACGACTGCCCCTACACCGA
CCCGCGTAAAGTGCTGGCCTGTGTGGCGTGGGAGAtgcccgctccttccc
cccctcatATCTTcacggcgggggaggacggacgcATCTATTCCTGGTCG
TACAACGCCGAACAAGCCCGGTTTGTGGTGGGGGCGACGTACGTAGGGCA
CACGCGCCCGGTGACGGCCCTGATCTTGGCAGCGACCGAAAACCCACCTT
TGCTGTACTCGGCGGGCTTAGACGGAACGATCCGGTGCTGGAACTGCGCC
AGTCATGCCTTGGAATGGACGAGCACGGCCGTCGGGGTTTTCCGCCGGCT
GTCCGAGCCTCCACAGCCACACGAAGGGCATGTGGAAGGGATCACGGACA
TGTGCTCGCTGGTCTGCGAAGGGCAGTCCTTCCTGGCCACCAGCAGCCAG
GATGGGAGCGTGCGGATTTGGAGCATCCAGGGGGGGAATCTGGGCGTGAC
CTTACCCCTGGATTTTCCCACGGGCGCAGCGGTAAAGCTGTGTCAAGTcg
cggcaggaggggagggggggggaagcgaccCGGCGGGCTTAGGCCCTCCG
TCGTTTTTGGTGGTCGCTTATGAAAGCGGGCACATGGTTTTCTGGACTTT
ACCCGGCTTGGAAACCTACTTGGTGATCGATCCACCCTACGCGGGGAAAC
CGGGGggtagggcgggagggcgggaaggaggtggggcctATGTCACATCC
TTGGTCACATTAAATCCGGGTATCATAGCGACCGGGTCTTCAGACGGCGT
ATTGAAGGTATGGTCGGTGCATCGCCCTGCAGTGGGAataggagggggag
gggcgtaAATGAGCGATGAAGCGAGGGCAAACGAGAGGTGTCATCATTAT
ATTTCTTCCAGCAAAGTTGCAAGAAGGGGCGAGGCCGCGGTGCATGCAAG
CTCTCTCCTACAGCAgcacaaaaagaagaaacCGGCGAGGCATTTACTTT
CCTGGGATAGTCCCGTGCTTTTAACACCGAGTAAAGGAGGCGTAATAGGC
CgcggcggacgtggGCACTCGGGCCGAGGTGGACCAGGGGTGAACCAAGC
AGGACAAGGCGCCCCTTTTCAATGCAAGCATACCCTGGACGGGACTTGCT
CGTGGGGCCCATCCCGGTGTCGGTACGTGCATGGGGTCGATTTCCATGCC
AACGGCGTGGATTTGGAGGCGCACAAAGGCGCCATCCGAGGCTTGGCCAG
CGATGCGAACTGCTTGTACACgttcggggaggacggaatCATCAAGACAT
ACAGCTGGACCCCAGGCACGGGCATCACGGGTTGCAAGGAGCAAAACGGT
GGGGGTCCGGGGAGtttcttcaccacctccgACCCCACCCACGCCTTCTA
TTTCTACGGCTTTCGGCAGCCTTTGGTGCCAGGCCTGAGCTCGGAGACCA
GCTTGGTGGGCCGGGCGCAAATGTTTTTCAACAACGCCTCCACCGACTTG
ACCGTCTCGGACGACTGCCCCTACACCGACCCGCGTAAAGTGCTGGCCTG
TGTGGCGTGGGAGAtgcccgctccttccccccctcatATCTTcacggcgg
gggaggacggacgcATCTATTCCTGGTCGTACAACGCCGAACAAGCCCGG
TTTGTGGTGGGGGCGACGTACGTAGGGCACACGCGCCCGGTGACGGCCCT
GATCTTGGCAGCGACCGAAAACCCACCTTTGCTGTACTCGGCGGGCTTAG
ACGGAACGATCCGGTGCTGGAACTGCGCCAGTCATGCCTTGGAATGGACG
AGCACGGCCGTCGGGGTTTTCCGCCGGCTGTCCGAGCCTCCACAGCCACA
CGAAGGGCATGTGGAAGGGATCACGGACATGTGCTCGCTGGTCTGCGAAG
GGCAGTCCTTCCTGGCCACCAGCAGCCAGGATGGGAGCGTGCGGATTTGG
AGCATCCAGGGGGGGAATCTGGGCGTGACCTTACCCCTGGATTTTCCCAC
GGGCGCAGCGGTAAAGCTGTGTCAAGTcgcggcaggaggggagggggggg
gaagcgaccCGGCGGGCTTAGGCCCTCCGTCGTTTTTGGTGGTCGCTTAT
GAAAGCGGGCACATGGTTTTCTGGACTTTACCCGGCTTGGAAACCTACTT
GGTGATCGATCCACCCTACGCGGGGAAACCGGGGggtagggcgggagggc
gggaaggaggtggggcctATGTCACATCCTTGGTCACATTAAATCCGGGT
ATCATAGCGACCGGGTCTTCAGACGGCGTATTGAAGGTATGGTCGGTGCA
TCGCCCTGCAGTGGGAataggagggggaggggcgtaAATGAGCGATGAAG
CGAGGGCAAACGAGAGGTGTCATCATTATATTTCTTCCAGCAAAGTTGCA
AGAAGGGGCGAGGCCGCGGTGCATGCAAGCTCTCTCCTACAGCAgcacaa
aaagaagaaacCGGCGAGGCATTTACTTTCCTGGGATAGTCCCGTGCTTT
TAACACCGAGTAAAGGAGGCGTAATAGGCCgcggcggacgtggGCACTCG
GGCCGAGGTGGACCAGGGGTGAACCAAGCAGGACAAGGCGCCCCTTTTCA
ATGCAAGCATACCCTGGACGGGACTTGCTCGTGGGGCCCATCCCGGTGTC
GGTACGTGCATGGGGTCGATTTCCATGCCAACGGCGTGGATTTGGAGGCG
CACAAAGGCGCCATCCGAGGCTTGGCCAGCGATGCGAACTGCTTGTACAC
gttcggggaggacggaatCATCAAGACATACAGCTGGACCCCAGGCACGG
GCATCACGGGTTGCAAGGAGCAAAACGGTGGGGGTCCGGGGAGtttcttc
accacctccgACCCCACCCACGCCTTCTATTTCTACGGCTTTCGGCAGCC
TTTGGTGCCAGGCCTGAGCTCGGAGACCAGCTTGGTGGGCCGGGCGCAAA
TGTTTTTCAACAACGCCTCCACCGACTTGACCGTCTCGGACGACTGCCCC
TACACCGACCCGCGTAAAGTGCTGGCCTGTGTGGCGTGGGAGAtgcccgc
tccttccccccctcatATCTTcacggcgggggaggacggacgcATCTATT
CCTGGTCGTACAACGCCGAACAAGCCCGGTTTGTGGTGGGGGCGACGTAC
GTAGGGCACACGCGCCCGGTGACGGCCCTGATCTTGGCAGCGACCGAAAA
CCCACCTTTGCTGTACTCGGCGGGCTTAGACGGAACGATCCGGTGCTGGA
ACTGCGCCAGTCATGCCTTGGAATGGACGAGCACGGCCGTCGGGGTTTTC
CGCCGGCTGTCCGAGCCTCCACAGCCACACGAAGGGCATGTGGAAGGGAT
CACGGACATGTGCTCGCTGGTCTGCGAAGGGCAGTCCTTCCTGGCCACCA
GCAGCCAGGATGGGAGCGTGCGGATTTGGAGCATCCAGGGGGGGAATCTG
GGCGTGACCTTACCCCTGGATTTTCCCACGGGCGCAGCGGTAAAGCTGTG
TCAAGTcgcggcaggaggggagggggggggaagcgaccCGGCGGGCTTAG
GCCCTCCGTCGTTTTTGGTGGTCGCTTATGAAAGCGGGCACATGGTTTTC
TGGACTTTACCCGGCTTGGAAACCTACTTGGTGATCGATCCACCCTACGC
GGGGAAACCGGGGggtagggcgggagggcgggaaggaggtggggcctATG
TCACATCCTTGGTCACATTAAATCCGGGTATCATAGCGACCGGGTCTTCA
GACGGCGTATTGAAGGTATGGTCGGTGCATCGCCCTGCAGTGGGAatagg
agggggaggggcgtaA back to top
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