EWM30017.1, cds655 (CDS) Nannochloropsis gaditana

Overview
NameEWM30017.1
Unique Namecds655
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:91647..91675 +
Alignment locationCM002456.1:91806..91969 +
Alignment locationCM002456.1:92435..92698 +
Alignment locationCM002456.1:92821..93842 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30017.1
Productzinc finger ccch domain-containing protein 63
Orig transcript idgnl|cribi|Naga_100391g4.3406.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:91647..91675 +
CM002456.1supercontigCM002456.1:91806..91969 +
CM002456.1supercontigCM002456.1:92435..92698 +
CM002456.1supercontigCM002456.1:92821..93842 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR000571Znf_CCCH
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|585112640|gb|EWM30017.1| (zinc finger ccch domain-containing protein 63 [Nannochloropsis gaditana])

HSP 1 Score: 1004.59 bits (2596), Expect = 0.000e+0
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query:    1 MSDEARANERCHHYISSSKVARRGEAAVHASSLLQQHKKKKPARHLLSWDSPVLLTPSKGGVIGRGGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREGGGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPAVGIGGGGA 492
            MSDEARANERCHHYISSSKVARRGEAAVHASSLLQQHKKKKPARHLLSWDSPVLLTPSKGGVIGRGGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREGGGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPAVGIGGGGA
Sbjct:    1 MSDEARANERCHHYISSSKVARRGEAAVHASSLLQQHKKKKPARHLLSWDSPVLLTPSKGGVIGRGGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREGGGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPAVGIGGGGA 492          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|553186653|ref|XP_005854461.1| (zinc finger ccch domain-containing protein 63, partial [Nannochloropsis gaditana CCMP526] >gi|422294594|gb|EKU21894.1| zinc finger ccch domain-containing protein 63, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query:   66 GGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGR 444
            GGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGR
Sbjct:   44 GGRGHSGRGGPGVNQAGQGAPFQCKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGR 422          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|971514184|dbj|GAQ84025.1| (WD40 repeat-containing protein [Klebsormidium nitens])

HSP 1 Score: 71.2478 bits (173), Expect = 1.578e-9
Identity = 107/417 (25.66%), Postives = 155/417 (37.17%), Query Frame = 0
Query:   89 CKHTLDGTCSWGPSRCRYVHGVDFHANGVD------LEAHKGAIRGLASDANC--LYTFGEDGIIKTYSWTPGTGITGCKEQNGGGPGSFFTTSDPTHAFYFYGF--------RQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNC-ASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQ-GGNLGVTLPLDFPTGAAVKLCQVAAGGE---GGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREGGGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPA 484
            C++ L G+C  G + C ++H    HA   D      L+ H+ A+R +A  A    LYT  +D  I+   W   TG        GG  G+  T +     F F G          Q   P   S    VG+           L V ++                        +F+  +DG I  W  N     F    T  GHT PV  L  AA +    LYS  +D +IR W+  A+ A   T TA             HE  V       SL+C  Q +L + S D ++R+W +   G L  T         AV+  Q    G     G  D AG      LV AY    +  + LP  +   ++   Y+ +              V +L+    G++ TG S G++KVW+  + A
Sbjct:  173 CRYWLGGSCRNG-ANCNFLH---VHATAPDVDLMTELKGHEKAVRAIALPAGSSELYTGSQDQSIRV--WDCETGQCKSVVPMGGDVGALLTEA----GFLFVGLPNEIKVWNMQSAPPAQHSLPGHVGQVH--------SLAVGNN-----------------------MLFSGAQDGTIRCWVLNTTSQNFEHVGTLSGHTAPVVTLQCAANK----LYSGSMDKSIRVWDLTANGACIQTLTA-------------HENVV------MSLLCWDQ-YLISCSLDNTIRVWGLNPAGQLENTYTYPEVEAGAVRAAQTPQDGALALCGSLDEAG---KPILVCAYNDNSVRLYDLPTFQERGIL---YSSRE-------------VRTLLAGPSGLLFTGDSAGLVKVWTWKKAA 505          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|813167532|ref|XP_012203862.1| (hypothetical protein SPRG_09378, partial [Saprolegnia parasitica CBS 223.65] >gi|641531360|gb|KDO25436.1| hypothetical protein SPRG_09378, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 70.8626 bits (172), Expect = 1.723e-9
Identity = 89/362 (24.59%), Postives = 132/362 (36.46%), Query Frame = 0
Query:   89 CKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTY---SWTPGTGITGCK-----------EQNGGGPGSFFTTSDPTHAFYFYGFRQ--PLVPGLSSETSLVGRAQMF-FNNAST---DLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHAL-EWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQ-GGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLE 428
            C   LD  C      CR  H   F         H G +R +A      +T   DG ++ +   S      I  CK           ++   G  S    S     F F G+ +  P +P +      VGR Q +   N S    +L  S + P+   R V +    + PA   P IF+ G DGRI  W ++A    F       GH   +T L +        L S+  D TIR W+ A++      S A G             GH   + D+   V  G+ FL +S  D  + +W +     +  T  LD P   A+ LC      +G             L++ ++ G +V   LP  +
Sbjct:   44 CTFHLDDRCQ--RDNCRAPH---FLKRLGMASGHNGTVRDVALWGQQAFTASSDGTLRLWALDSMKEAAVIPQCKIEIDTLPVEKSKKVTEGVSSLLLES----PFLFVGYEEQTPAIPDVP-----VGRIQCWNLENPSMPPMELAQSAEMPFAMYRNVTSLAMAKHPATGAPIIFSGGADGRIAYWMFDAATNAFTCAGVMEGHALAITRLKVVQLGATTALISSSRDHTIRIWDVATYKCGTVLSRATG-------------GHANIVLDIEIWVSNGEPFLISSGYDQQIIVWQLSPPFAVMYTETLDSP---ALALCTTTDAVDG-----------PLLLLGHDDGSIVIKELPSFK 364          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|299471884|emb|CBN77054.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 68.1662 bits (165), Expect = 1.067e-8
Identity = 97/414 (23.43%), Postives = 169/414 (40.82%), Query Frame = 0
Query:   89 CKHTLDGTCSWGPSRCRYVHGVDFHANGV---DLEAHKGAIRGLA---SDANCLYTFGEDGIIKTYSWTPG---TGITGCKEQNGGGPGSFFTTSDPTHAFYFYGFRQPLVPGLSSETSLVGRAQMFFNNASTDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQ--SFLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPP--YAG--KPGGRAGGREGGGAYVTSLV-----TLNPGIIATGSSDGVLKVWSVHR 482
            CK    G C    S CR+ H V   +  V   + +  +GA+R L       + +++  +DG +K +S T G   T +T  +       G             + G+  P      ++ ++     M   + ST   VS    +    ++   +  ++ A   P ++T  E+GRI +W+  +  A F   A   GH R +T+L+  A+    +L+S+  DGTIR WN  ++A   T         +++    HEG V  +  +     EG    ++ + S+DG++ ++  Q  + G+T      TG +     +AA       DP   G  + L+V YE G +     P       I P   Y G  KP             V +L+     +++ G   +   DG +  W+VH+
Sbjct:   69 CKFYAAGNCDRAAS-CRHRHAVQKVSEAVVSEESDGFRGAVRSLVQWKDKPDHVFSACDDGTVKMWSTTDGSTWTQVTSVQMTEWRHVGDL----QEVEGVLYVGYGTPY--AHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAKVGAE--PRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNG--MLWSSSEDGTIRIWNTGTNACVHT---------ITKDNGGHEGPVAALA-IGQSAAEGTLAEYVISGSKDGTMGVF--QAADGGLTYKHKCGTGVSA----IAA------FDPTP-GTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKP-------------VLALLPFNNPSIDDGYFLSAGEDGTMMCWNVHK 435          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|1101779694|gb|OIR58783.1| (U3 small nucleolar RNA-interacting protein 2, RRP9 [Amphiamblys sp. WSBS2006])

HSP 1 Score: 65.855 bits (159), Expect = 3.587e-8
Identity = 58/239 (24.27%), Postives = 90/239 (37.66%), Query Frame = 0
Query:  248 GEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQS-FLATSSQDGSVRIWSIQGGNLGVTLPLDFPTGAAVKLCQVAAGGEGGGSDPAGLGPPSFLVVAYESGHMVFWTLPGLETYLVIDPPYAGKPGGRAGGREGGGAYVTSLVTLNPGIIATGSSDGVLKVWSVHRPAV 485
            GE+G ++ WS    +    +  T   H  PVT L          LY+A LD  I  W   + A                  +   GH  GI  +C   CE ++  L+    D +VR+W +      V    + PTG A  +C + A     G+D               +G ++ W L              G+P        G  A +  LV ++  + A+GS+DGVLK+W   +  +
Sbjct:   97 GENGNVFFWSVETRK----IVRTIKAHNAPVTGLCFGREAKKGFLYAASLDRKITTWCTRTFA----------------AAETLYGHQAGIATLC---CEKENELLSAGLGDKTVRVWKLNEKKNLVFETKNEPTGFATAVCALDADRFVSGTD---------------TGSVLVWDLA------------HGEPVAHKHKAHGEKAPIEVLVRVDGSLFASGSTDGVLKIWRAGKDKI 285          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|669153390|ref|XP_008612257.1| (hypothetical protein SDRG_08165 [Saprolegnia diclina VS20] >gi|530736153|gb|EQC34395.1| hypothetical protein SDRG_08165 [Saprolegnia diclina VS20])

HSP 1 Score: 66.6254 bits (161), Expect = 3.850e-8
Identity = 75/299 (25.08%), Postives = 110/299 (36.79%), Query Frame = 0
Query:   89 CKHTLDGTCSWGPSRCRYVHGVDFHANGVDLEAHKGAIRGLASDANCLYTFGEDGIIKTY---SWTPGTGITGCK-----------EQNGGGPGSFFTTSDPTHAFYFYGFRQ--PLVPGLSSETSLVGRAQMF-FNNAST---DLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHAL-EWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSI 366
            C   LD  C      CR  H   F         H G +R +A      +T   DG ++ +   +      I  CK           ++   G  S    S     F F G+ +  P +P +      VGR Q +   N S    +L  S + P+   R V +    + PA   P IF+ G DGRI  W ++A    F       GH   +T L +        L S+  D TIR W+ A++      S A G             GH   + D+   V  G+ FL +S  D  + +W +
Sbjct:   43 CTFHLDDRCQ--RDNCRAPH---FLKRLGMASGHNGTVRDVALWGQQAFTASSDGTLRLWALDTMKEAAVIPQCKIEIDTLPVEKSKKVTEGVSSLLLES----PFLFVGYEEQTPAIPDVP-----VGRIQCWNLENPSMPPMELAQSVEMPFAMYRNVTSLAMAKHPATGAPIIFSGGADGRIAYWMFDAATNAFTCAGVMEGHALAITRLKVVQLGATTALISSSRDHTIRIWDVATYKCGTVLSRATG-------------GHANIVLDIEIWVSNGEPFLISSGYDQQIIVWQL 314          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|573931857|ref|XP_006651037.1| (PREDICTED: zinc finger CCCH domain-containing protein 48-like [Oryza brachyantha])

HSP 1 Score: 65.855 bits (159), Expect = 6.084e-8
Identity = 42/144 (29.17%), Postives = 65/144 (45.14%), Query Frame = 0
Query:  236 MPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQGGNLGVTLPLDF 379
            M A    H+F   EDG +Y W  N EQ  F   A   GH + V +L     +    LYS   DG+IR W+  +H   ++                  GH   +T   +L+C  + FL +SS DG+V++W  +  + G+ L + +
Sbjct:  218 MLAEDDMHLFAGAEDGAVYMWRMNQEQQSFDEVAALTGHDKAVVSL----AQGKGALYSGSADGSIRVWDLETHRCIYSFA----------------GHSSAVT---ALLC-WERFLLSSSDDGTVKVWQSRPDHDGLDLEVHY 337          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|1173953135|gb|OQS00699.1| (hypothetical protein THRCLA_05892 [Thraustotheca clavata])

HSP 1 Score: 65.855 bits (159), Expect = 6.288e-8
Identity = 52/192 (27.08%), Postives = 80/192 (41.67%), Query Frame = 0
Query:  182 FYGFRQPL--VPGLSSETSLVGRAQMF-FNNAS---TDLTVSDDCPYTDPRKVLACVAWEMPAPSPPHIFTAGEDGRIYSWSYNAEQARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNCASHALEWTSTAVGVFRRLSEPPQPHEGHVEGITDMCSLVCEGQSFLATSSQDGSVRIWSIQ 367
            F GF +P   +P +      VGR Q +   N +    +  VS + P+   R V A    + P      IF+   DGRI  W Y+A    F  G    GH+R +T L          L S+ +D TIR W+  +            F+  +   + ++GH   + D+   V  G+ FL +   D  V +W +Q
Sbjct:  132 FVGFEEPTAAIPDVP-----VGRIQCWNLENPAAPPMEFMVSPEMPFAHYRNVWALAVAKDPTTGAIIIFSGSGDGRIRYWMYDAATQAFKCGGVMEGHSRGITRLKTVQLGAAMALISSSMDHTIRIWDLTT------------FKCATVLSRANDGHANVVMDIEVWVNNGEQFLISGGLDQQVIVWRLQ 306          
BLAST of EWM30017.1 vs. NCBI_GenBank
Match: gi|397580738|gb|EJK51688.1| (hypothetical protein THAOC_29115, partial [Thalassiosira oceanica])

HSP 1 Score: 64.3142 bits (155), Expect = 1.876e-7
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0
Query:  244 IFTAGEDGRIYSWSYNAE----QARFVVGATYVGHTRPVTALILAATENPPLLYSAGLDGTIRCWNC----ASHALEWTSTAVGVFRRLS-EPPQPHEGHVEGITDMC--SLVCEGQSFLATSSQDGSVRIWSIQGGN 370
            +++ G DG I  W++N +    +  FV+  TY GH   VT + L        L+S+G+DGT+R WNC     +H +       G     +  P Q   GH   I ++    L  +G SF+ +SS DG+V++W+   G+
Sbjct:  223 VWSGGSDGIIRQWAFNPQGPDGKPGFVLTKTYYGHLGAVTGIALVKGN----LWSSGMDGTLRIWNCDKAEQAHLIPANKNDRGNQNNGNPTPAQKGPGHSGPINEIVPFELPNDGGSFIMSSSNDGTVKVWNATNGD 356          
The following BLAST results are available for this feature:
BLAST of EWM30017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112640|gb|EWM30017.1|0.000e+0100.00zinc finger ccch domain-containing protein 63 [Nan... [more]
gi|553186653|ref|XP_005854461.1|0.000e+0100.00zinc finger ccch domain-containing protein 63, par... [more]
gi|971514184|dbj|GAQ84025.1|1.578e-925.66WD40 repeat-containing protein [Klebsormidium nite... [more]
gi|813167532|ref|XP_012203862.1|1.723e-924.59hypothetical protein SPRG_09378, partial [Saproleg... [more]
gi|299471884|emb|CBN77054.1|1.067e-823.43conserved unknown protein [Ectocarpus siliculosus][more]
gi|1101779694|gb|OIR58783.1|3.587e-824.27U3 small nucleolar RNA-interacting protein 2, RRP9... [more]
gi|669153390|ref|XP_008612257.1|3.850e-825.08hypothetical protein SDRG_08165 [Saprolegnia dicli... [more]
gi|573931857|ref|XP_006651037.1|6.084e-829.17PREDICTED: zinc finger CCCH domain-containing prot... [more]
gi|1173953135|gb|OQS00699.1|6.288e-827.08hypothetical protein THRCLA_05892 [Thraustotheca c... [more]
gi|397580738|gb|EJK51688.1|1.876e-731.16hypothetical protein THAOC_29115, partial [Thalass... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna655rna655Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications