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Properties
| Property Name | Value |
|---|
| Product | dolichol kinase |
| Orig transcript id | gnl|cribi|Naga_100552g4.9951.mrna |
| Orig protein id | gnl|cribi|Naga_100552g4.9951 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:678594..681229 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6509 ID=rna6509|Name=rna6509|organism=Nannochloropsis gaditana|type=mRNA|length=1864bp
GCGTTTTCGTGAGAATGAGGGTGTGGTGGCGGTTTAATGGACATGCCTGC
GTTTCCGGAATGGGTCTAGGGCGGACATGGGCATGACGCCATCATGCTTC
TGCGGACCCGCCGCACTCGACGTGCCCTATTTGTCCCCCTTAATTGACGC
AATCTGTGGAAGAGTTGCGATGCGCGCCTACGTCTCGTTGTTGAAAAATA
TTTCGACGGTTATGAATATCTAAAGGAAGGTCGACGGTGTTTGGAAGAGG
TGGTCTGGAGACTCGAGACGCCAAAAGCGACACACGGAGAGCTCGTTTTT
ACACAGTGAAGAGAAACTCCATGAAAACGAACTGGGAAACTGCGCTGATA
ACAGAACACCTGGTACTGGTCCCGTACCGAAGGAAGTACGTGCATCGGTA
TCACGAATGGATGAAAGACCCGTTTTTGCAGGAATCCACGGCCTCGGAGC
CTTTGACGCTGGAGGAGGAATACGCGATGCAAGCGTCCTGGAGGGACGAT
GAGAAAAAGTGTACCTTCATCCTCCTTGACAAGACCCATCCTGCCGCCTC
ACCTCCTCTCTTCGCTCCTTGCACCATGGTCGGCGACGTGAACCTCTTTT
TCAATGATCCAGATGGTGATATGGGCGTGGCGGAAATCGAAATTATGATT
GCTGAGCCCACAAGGAGAGGGAGGGGGCTTGGGATGGAGGGGGTGGAAGC
GATGATGCAGTACGCCATAGAGGCACTGGGGGTCCGGCGCTTTTATTGCA
AAATCTCCGACAGCAACGTGGCGAGCCTGCGCATGTTCGAAAGAATCGGG
TATGTGCGGGTGGCGTACGTAGCAGCTTTCAAGGAGGTGGAGCTCGAGTT
TCTGATCAGGGAGGACCAGGATTGGCAGCAGAAAATCTGCATTTTGCGGG
ACAATCTCGGCAAGGGCGGAGGAGTGTCCATGGTACCGTATCGTGATGAG
GAGGGAGGGAAGGAAGGTGACTAGAGAAGGCCGGCATGGAGGGTCGTGGA
GTTCACGCCATAATCCCATGTCATCGAACTGCTGCTGGGCCCAAGGTTCG
CGTTGATTCCCTACAGAGGCCTCCGCGTGACCTTCCTGCCTCGCAGCGCC
CGTGTCCGATCGTTCTGGGCCCTCGAAAGGCGCCCCTGGTCTGCTCGTGC
ACATACGGGGGGAAGGAGAAGATGCTTATCAGACAGAGAGCTCCATTAGC
GAGGATTTTGAGGATACAGAGATTCAGTCTACAAAACGGAACATCCCACC
TGGCTCCGTGGTATCTCTCGCACGAGGGAATATCGTCTCCAGCGGCATGC
TTGACACCACGGCCTAATCGTGCCTGGGAAGGAACGTGGTCATGCCAAGA
GCATGTTCGTGTGATACTGAATGTTTCGGAGTAGGAGCTTCTCAGCACGC
TGCATTGGAGGGATTTCTATGGCATTTGCCTGGCCCTTTTGTCTCCGAGG
TGCCAGGCGGCCTTCATGCACGGTAGACAGCTGGTTGTAGATTCCCTGGT
GTGTTCGCGATCTGGGAATGCAAGCTTGTTTTGAAACGTTGGCTCGATGA
ATAATTGATTTGCCCGAAGGAACGGCAAGGTCACTGCAGGACTGAATAAT
AATATCCCAGGACAGATGAAGAAAGAAATGTAAATCCCGATGGGTTGAGA
GACTGAGGGGGACAAACTGGCGCGGAATATATATGGAGGTAGGAAAATGT
ACAGGAGATGAGGAAATGAAGCGGCGCCACAGCAACAAGCACTTGAAAAG
AGTGGGTTCAGATAATAACACATTGTGGTTTTTTTTTCCCATGCTCCTTG
TTTTGCACAGCAGGAAGAGTGGTTCATAAGGAAGTACGCTCTCAGAGTGA
GCAAGCGCAATAAT back to topprotein sequence of rna6509 >rna6509-protein ID=rna6509-protein|Name=rna6509|organism=Nannochloropsis gaditana|type=polypeptide|length=554bp
MTLGLTGLPALLASCHLLLPLDPFLTALFQASLLCAFGLAVRHLCWPSSL
PLLARPLLVLLPALLPAILPCPSPAFLTLVYVLHETLSAIIAPLPLVRAS
FTKGEAAILLQALALTYADILSLTLARAGTELFPYRVTDGSSGNGWLERV
GVARLYASAEVEARQPVFLVVEAGLLTVVTAGAVVVPLFCPALLTPAGPG
GGGSEDTTRMEKGGETAKDGKEGRAAGRKGSLKGLEGGGKPVAGTGTAPG
SQGVAPVPALPPSLPPSLSTALPTLAFLSLFAAILLLLLFPWLTFLLPSH
PHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTR
KAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGR
PVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLA
GILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLG
QEGGKERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVALFNVAWHVAT
GSRG back to topmRNA from alignment at CM002468.1:678594..681229+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6509 ID=rna6509|Name=rna6509|organism=Nannochloropsis gaditana|type=mRNA|length=2636bp|location=Sequence derived from alignment at CM002468.1:678594..681229+ (Nannochloropsis gaditana)
ACGAGCCCTCTCTGTGTTCCGGTTCGTAAACCCTGCATGCTATTAGTTCT
TAACTCGTCCACGAacggcttttcctcctcgtacaATTTGTAAGACAGAA
CCTAAAGGTGCTTTACAGAGCGCCAACATACCCCCGGGCACCATACTTGC
ACATCGCGCATGCAAAGCATCTGCCCCCCagggccctccctcctcgttgc
TTCCACCTATCAAGGACCGTATTATCAGCACTGAAGAGCACAcgcaggag
gatgaggccATCCGCTCAGGGCCTCATGTTGAAGCAGTTGGGTCGGTAGC
TTTGCTATGTCCGGCAATCAATGTATTGGCGGCGAAAGAGGACGACAGCA
GTTACAGCAGTACCAGCACTTCGCATGAAAAGCATCAGGCTCCAGCACCG
ATCTTGCCCGCACCTCACCACCCCACCGACTCTCCAGCCGCAGCCTCGCC
ATCAAGTTCCCCCACCGCATCCCTCCACCtcaccgctccctcctttcctc
cctccgccctccacgtcccggccgcccccccgggcctGGCCGAGCTCCTC
GTCGTCTGTAGCATCCTCACCTggctcgctctcctcctctggcaAGAGTC
CACGGCATCGCATGGCCACGaagccttcgccctcctcctccttggcgcgT
GCACCTACCCGAGCCTGGGGCCTTCCCAtttccgccccgccctcgactCG
GGCATGACTCTGGGCCTCACCgggctccccgccctcctggccagctgcca
tctcctcctccccctcgaccccttcctcactGCCCTCTTCCAAGCCAGCC
TCCTTTGCGCCTTTGGCTTGGCGGTCCGGCACCTGTGttggccctcctct
ctccctctcctcgcccgccccctcctcgtcctcctgcccgccctccttcc
cgcaatccttccctgcccctcccccgctttcctcacGCTTGTCTACGTCC
TCCACGAGACCCTTTCGGCCATcattgctcccctccctctcgtcagGGCC
TCCTTTAccaagggggaggccgccatcctcctccaggcgtTGGCATTGAC
CTACGCAgacatcctctccctcactctCGCCCGAGCAGGGACGGAGCTAT
TCCCCTACCGTGTCACcgacggcagcagcggcaacgGATGgctggagagg
gtgggagtggcCAGACTCTACGCCAgcgccgaggtggaggctcGTCaacc
cgtcttcctcgtcgttgAGGCGGGCCTCTTAACGGTCGTAACGGCCGGCG
CCGTTGTCGTGCCGTTGTTTTGCCCCGCATTGCTGACGCCGGCGGGccca
gggggcgggggctcgGAGGACACGAccaggatggagaaggggggcgagac
ggcgaaggatgggaaggaggggagggccgcagggagaaagggctCGCtca
aggggttggagggcggtgggaagcCCGTCGCAGGCACGGGCACCGCTCCA
GGCAGTCAGGGCGTGGCCCCtgttcctgccctccctccctccctcccccc
ctccctctccaccgccctccccaccctcgccttcctctccctcttcgctg
ccatcctcctcctcctccttttcccctggctgactttcctcctcccctcc
cacccgcaccccctccgctggcttctcaccttcctcctctccaagccttc
ctacctccctctcctcgccctctggtCTCTtaccctcctcgccttcaccA
GCGCcatcgtccctctctcccgtgctttctccctcccccgaatCCTCACT
CGCAAGGCCTTCCATGCATtggccacctccctcttcgccctccccgccct
ccatcagcccctcttcctctccctcgcacacgccctcgccctttccctcc
tcctccttcttgaatACCTGCGCCTCGGTCgagcttccctcctcctcggc
cgtcCGGTCCACCGATACTACCAGCACTTCCTCGACGACCGCGATATGGG
CCCTTTGGTTGTCACCCACCTCTACCTTCTTCTCGCCTGCGCCTTTCCGC
TCTggctctcctttctccttcccccaaatcgcccgccctccctgcccttg
gCCGGTATCTtggtggtggggatgggcgatgccgccgctgccaccgtGGG
GACGCTGTGTGGCAAACACCGATGGCCTTGGACCCGCAGGACGCTGGAGG
GTTCGGCGGCCTTCTTTATCGCTACCGGCCTGGGTGTCTTCACTCAGctg
ggacaggaaggagggaaggagagaggggtgtggggatgggtgggggcggt
ggtgtTGCTGACACTCTTGGAGGCATTCACCGCCCAGATCGATAACTTGG
TCCTTCCTGTGTACGCAGTGGCTCTCTTCAATGTCGCCTGGCACGTCGCC
ACAGGATCAAGGGGGTAGGGTTAAAGTTAGAGGAATGGAGCGGGGGCAAC
ATAATGGTGGAGGTCAGCGGTacagaagagaggagaagagaaggttGATa
ctgaggggaggggcaaagggtGGTATCCGGTGCTGTACATGCCAAAGTAC
CCGTAGCTTGCCGTACAAGTGGCGCATCAGGACCCAAAAGTAACTAATGT
ACCTATGTCTTGAGAGTTGCTTGTAGCACTTAAGCCTTCTGCGCACATGA
TCTACTCTTCATGATAACAAGATACCATGGAGGACT back to topCoding sequence (CDS) from alignment at CM002468.1:678594..681229+ >rna6509 ID=rna6509|Name=rna6509|organism=Nannochloropsis gaditana|type=CDS|length=1665bp|location=Sequence derived from alignment at CM002468.1:678594..681229+ (Nannochloropsis gaditana)
ATGACTCTGGGCCTCACCgggctccccgccctcctggccagctgccatct
cctcctccccctcgaccccttcctcactGCCCTCTTCCAAGCCAGCCTCC
TTTGCGCCTTTGGCTTGGCGGTCCGGCACCTGTGttggccctcctctctc
cctctcctcgcccgccccctcctcgtcctcctgcccgccctccttcccgc
aatccttccctgcccctcccccgctttcctcacGCTTGTCTACGTCCTCC
ACGAGACCCTTTCGGCCATcattgctcccctccctctcgtcagGGCCTCC
TTTAccaagggggaggccgccatcctcctccaggcgtTGGCATTGACCTA
CGCAgacatcctctccctcactctCGCCCGAGCAGGGACGGAGCTATTCC
CCTACCGTGTCACcgacggcagcagcggcaacgGATGgctggagagggtg
ggagtggcCAGACTCTACGCCAgcgccgaggtggaggctcGTCaacccgt
cttcctcgtcgttgAGGCGGGCCTCTTAACGGTCGTAACGGCCGGCGCCG
TTGTCGTGCCGTTGTTTTGCCCCGCATTGCTGACGCCGGCGGGcccaggg
ggcgggggctcgGAGGACACGAccaggatggagaaggggggcgagacggc
gaaggatgggaaggaggggagggccgcagggagaaagggctCGCtcaagg
ggttggagggcggtgggaagcCCGTCGCAGGCACGGGCACCGCTCCAGGC
AGTCAGGGCGTGGCCCCtgttcctgccctccctccctccctccccccctc
cctctccaccgccctccccaccctcgccttcctctccctcttcgctgcca
tcctcctcctcctccttttcccctggctgactttcctcctcccctcccac
ccgcaccccctccgctggcttctcaccttcctcctctccaagccttccta
cctccctctcctcgccctctggtCTCTtaccctcctcgccttcaccAGCG
CcatcgtccctctctcccgtgctttctccctcccccgaatCCTCACTCGC
AAGGCCTTCCATGCATtggccacctccctcttcgccctccccgccctcca
tcagcccctcttcctctccctcgcacacgccctcgccctttccctcctcc
tccttcttgaatACCTGCGCCTCGGTCgagcttccctcctcctcggccgt
cCGGTCCACCGATACTACCAGCACTTCCTCGACGACCGCGATATGGGCCC
TTTGGTTGTCACCCACCTCTACCTTCTTCTCGCCTGCGCCTTTCCGCTCT
ggctctcctttctccttcccccaaatcgcccgccctccctgcccttggCC
GGTATCTtggtggtggggatgggcgatgccgccgctgccaccgtGGGGAC
GCTGTGTGGCAAACACCGATGGCCTTGGACCCGCAGGACGCTGGAGGGTT
CGGCGGCCTTCTTTATCGCTACCGGCCTGGGTGTCTTCACTCAGctggga
caggaaggagggaaggagagaggggtgtggggatgggtgggggcggtggt
gtTGCTGACACTCTTGGAGGCATTCACCGCCCAGATCGATAACTTGGTCC
TTCCTGTGTACGCAGTGGCTCTCTTCAATGTCGCCTGGCACGTCGCCACA
GGATCAAGGGGGTAG back to top
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