EWM24180.1, cds6493 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|585105561|gb|EWM24180.1| (dolichol kinase [Nannochloropsis gaditana]) HSP 1 Score: 1060.44 bits (2741), Expect = 0.000e+0 Identity = 554/554 (100.00%), Postives = 554/554 (100.00%), Query Frame = 0
Query: 1 MTLGLTGLPALLASCHLLLPLDPFLTALFQASLLCAFGLAVRHLCWPSSLPLLARPLLVLLPALLPAILPCPSPAFLTLVYVLHETLSAIIAPLPLVRASFTKGEAAILLQALALTYADILSLTLARAGTELFPYRVTDGSSGNGWLERVGVARLYASAEVEARQPVFLVVEAGLLTVVTAGAVVVPLFCPALLTPAGPGGGGSEDTTRMEKGGETAKDGKEGRAAGRKGSLKGLEGGGKPVAGTGTAPGSQGVAPVPALPPSLPPSLSTALPTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLGQEGGKERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVALFNVAWHVATGSRG 554
MTLGLTGLPALLASCHLLLPLDPFLTALFQASLLCAFGLAVRHLCWPSSLPLLARPLLVLLPALLPAILPCPSPAFLTLVYVLHETLSAIIAPLPLVRASFTKGEAAILLQALALTYADILSLTLARAGTELFPYRVTDGSSGNGWLERVGVARLYASAEVEARQPVFLVVEAGLLTVVTAGAVVVPLFCPALLTPAGPGGGGSEDTTRMEKGGETAKDGKEGRAAGRKGSLKGLEGGGKPVAGTGTAPGSQGVAPVPALPPSLPPSLSTALPTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLGQEGGKERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVALFNVAWHVATGSRG
Sbjct: 1 MTLGLTGLPALLASCHLLLPLDPFLTALFQASLLCAFGLAVRHLCWPSSLPLLARPLLVLLPALLPAILPCPSPAFLTLVYVLHETLSAIIAPLPLVRASFTKGEAAILLQALALTYADILSLTLARAGTELFPYRVTDGSSGNGWLERVGVARLYASAEVEARQPVFLVVEAGLLTVVTAGAVVVPLFCPALLTPAGPGGGGSEDTTRMEKGGETAKDGKEGRAAGRKGSLKGLEGGGKPVAGTGTAPGSQGVAPVPALPPSLPPSLSTALPTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLGQEGGKERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVALFNVAWHVATGSRG 554
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|511010795|gb|EPB92011.1| (hypothetical protein HMPREF1544_01074 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 152.525 bits (384), Expect = 6.413e-36 Identity = 114/301 (37.87%), Postives = 163/301 (54.15%), Query Frame = 0
Query: 272 LPTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLL------AFTSAIVPLSRAFSLP------RILT------RKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIA----TGLGVFTQ--LGQEGGKE------RGVWGWVGAVVLLT-LLEAFTAQIDNLVLPVYAVAL 541
L +AF L A I+L ++ P + + +P W L FL PS + L WSLT++ VP S+ L + LT RK FHALA +F L + FL LA +ALS + LEYLR A G+ +H + F+D+RD+GP++++H+YLLL CA P+WL N SL +G+L +G GDAAA+ VG G++RWP T++T+EG+AAF IA + L V++ +G +G RG W V+ LT LLEAF+ Q DN+++P+Y AL
Sbjct: 350 LVAIAFYILTATIVLFVIAPICKSV--TGENPFMWTLDFLYMSPSRMFLCLYWSLTVITTVVIWVLVLDFVPQSQNGDLYSSHVEGKALTSALNKKRKLFHALAVIMFVPGVLFEKSFLQLAFGVALSGFIYLEYLRYF-AVWPWGKSLHVFLTEFIDNRDLGPVILSHIYLLLGCASPVWLG---SANVLASL--SGVLSLGFGDAAASIVGKRFGRYRWPGTKKTVEGTAAFIIAVFFSSWLIVYSSALVGVDGASRYVASAGRGEWLNYSVVITLTALLEAFSTQNDNIIIPLYMYAL 642
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|703157764|ref|XP_010111811.1| (hypothetical protein L484_020600 [Morus notabilis] >gi|587945369|gb|EXC31776.1| hypothetical protein L484_020600 [Morus notabilis]) HSP 1 Score: 150.214 bits (378), Expect = 9.484e-36 Identity = 104/271 (38.38%), Postives = 152/271 (56.09%), Query Frame = 0
Query: 273 PTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKP-SYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPAL-HQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWT-RRTLEGSAA---FFIATGLGVFTQLGQEGGKERGVW-GWVGAVVLLTLLEAFTAQIDNLVLPV 536
+L F S +++L++ W+ F+L H HPL W +F+ S+P L L W + + A +S+ + RIL RK +H +A S+F LPAL QP FL LA AL + ++LE +R+ R LG+PVH++ F D RD L+V+H LLL CA P+W+S +RP + P AGIL +G+GD A+ VG G RW T ++T+EG+AA +AT + L G W V AV++ LLEA+T Q+DN +P+
Sbjct: 225 KSLIFFSSLGFVMILIIPSWMQFILDFHMHPLLWGFSFVFSEPLKRLSLCIYWVIVICASILKFYNISKNSKIERILLRKYYHLMAVSMF-LPALIFQPKFLDLAFGAALGVFMVLEIVRVWRI-WPLGQPVHQFMNAFTDHRDSDILIVSHFSLLLGCALPIWMSSGY-SDRPLA-PFAGILSLGIGDTMASMVGYKYGVLRWSKTGKKTIEGTAAGITSVLATCSVLLPVLASTGYIVTEHWSSLVVAVIVSGLLEAYTTQLDNAFIPL 491
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|758364124|emb|CEP13489.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 151.754 bits (382), Expect = 2.277e-35 Identity = 108/302 (35.76%), Postives = 161/302 (53.31%), Query Frame = 0
Query: 272 LPTLAFLSLFAAILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLA------FTSAIVPLS-------------RAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAF----FIATGLGVFTQ--LGQEGGKE------RGVWGWVGAVVLLT-LLEAFTAQIDNLVLPVYAVAL 541
L + F L I+L ++ P + + +P W L FL PS + L WSLT++ VP S +A + RK FHALA +F L + FL LA +ALS + LEYLR A G+ +H + F+D+RD+GP++++H+YLLL CA P+WL N SL +G+L +G GDAAA+ +G G++RWP T++T+EG+AAF F+++ + V++ +G +G RG W AV+ LT LLEAF+ Q DN+++P+Y AL
Sbjct: 418 LVAITFYVLTGVIVLFIIAPICQAI--TGENPFMWTLDFLYMSPSRMFLCLYWSLTVITTVVIWVLVLDFVPQSASSGELYSNNAEGKALTSALNKKRKLFHALAVIMFVPGVLFEKSFLQLAFGVALSGFIYLEYLRYF-AVWPWGKSLHVFLTEFIDNRDLGPVILSHIYLLLGCASPVWLG---SSNVLASL--SGVLSLGFGDAAASIIGKRFGRYRWPGTKKTVEGTAAFIVAVFVSSAVIVYSSALVGIDGAARYVASAGRGEWLNYSAVITLTALLEAFSTQNDNIIIPLYMYAL 711
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|1191053374|ref|XP_020904622.1| (dolichol kinase-like, partial [Exaiptasia pallida]) HSP 1 Score: 143.28 bits (360), Expect = 6.632e-35 Identity = 96/262 (36.64%), Postives = 146/262 (55.73%), Query Frame = 0
Query: 288 LLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPL-AGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLGQEGGKERGVWGWVG---AVVLLTLLEAFTAQIDNLVLPVYAVALFNVA 545
L PW T+L+ +PL WL+ F+ + L+ WS +L +V + + +TRK FH LA ++F + + LA ++AL+ + +EY+RLGR G +H Q FLD++D G +++TH+YLL CA P+WL + + P R +L + +G+L +G+GD A+ VG G++ WP + +TLEG+ A +A +F L G R V WV V +LLEA+T+QIDNLVLP + AL VA
Sbjct: 53 FLLPW-TYLMLGGVNPLSWLIHFITYTRTRYYLVGYWSCIVLLSIMIVVSKNWNNTQTTTVTRKYFHVLAIAVFLPGIMLESKLTHLAASVALAAFIFIEYVRLGRIEPF-GDLIHHSLQVFLDEKDSGNVILTHVYLLFGCAIPIWL-YPVYPERSSALAMYSGVLSLGVGDTLASLVGKKYGQNNWPGSNKTLEGTMAGLMAQ--FIFIGLLSRTGVVRVV-NWVATALCVAACSLLEAWTSQIDNLVLPPFLYALIVVA 308
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|999972734|gb|KXJ11908.1| (Dolichol kinase [Exaiptasia pallida]) HSP 1 Score: 142.895 bits (359), Expect = 7.944e-35 Identity = 96/262 (36.64%), Postives = 146/262 (55.73%), Query Frame = 0
Query: 288 LLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPL-AGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQLGQEGGKERGVWGWVG---AVVLLTLLEAFTAQIDNLVLPVYAVALFNVA 545
L PW T+L+ +PL WL+ F+ + L+ WS +L +V + + +TRK FH LA ++F + + LA ++AL+ + +EY+RLGR G +H Q FLD++D G +++TH+YLL CA P+WL + + P R +L + +G+L +G+GD A+ VG G++ WP + +TLEG+ A +A +F L G R V WV V +LLEA+T+QIDNLVLP + AL VA
Sbjct: 47 FLLPW-TYLMLGGVNPLSWLIHFITYTRTRYYLVGYWSCIVLLSIMIVVSKNWNNTQTTTVTRKYFHVLAIAVFLPGIMLESKLTHLAASVALAAFIFIEYVRLGRIEPF-GDLIHHSLQVFLDEKDSGNVILTHVYLLFGCAIPIWL-YPVYPERSSALAMYSGVLSLGVGDTLASLVGKKYGQNNWPGSNKTLEGTMAGLMAQ--FIFIGLLSRTGVVRVV-NWVATALCVAACSLLEAWTSQIDNLVLPPFLYALIVVA 302
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|1050355710|gb|OCT57934.1| (hypothetical protein XELAEV_18002805mg [Xenopus laevis]) HSP 1 Score: 142.124 bits (357), Expect = 9.555e-35 Identity = 99/279 (35.48%), Postives = 147/279 (52.69%), Query Frame = 0
Query: 284 ILLLLLFPWLTFLLPSHPHPLRWLLTFLLSKPSYLPLLALWSLTLLAFTSAIV---------PLSRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSL-------PLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIATGLGVFTQ--------LGQEGGKERGVWGWV-GAVVLLTLLEAFTAQIDNLVLPVY 537
I+L + PWL +L+ HPL WLL FL+ + L LLA W LLA + +V P S+ + + TRK FH LA + + ++ L +A + L++ +LLEY+R R G+ + FLD+RD GPL++TH+YLLL + P+WL P SL P AG+L VG+GD A+ G+ G+ RWP T++T EG T + +F Q + + W+ G++ L++LLEAFT QIDN++LP+Y
Sbjct: 16 IVLRVFVPWLQYLI--RRHPLLWLLEFLVQSHTRLCLLAFW--VLLALVACVVVLYQNSKRSPDSKKLQVSTV-TRKYFHFLAVATYIPGLIYDRQLLFVASVVCLAVFILLEYVRYFRIKPF-GQTLRNLLTLFLDERDSGPLILTHIYLLLGMSLPVWL---FPRVCSTSLTGSSTLLPYAGVLAVGVGDTIASVCGSAMGELRWPGTKKTFEG-------TMMSIFAQIIAAALILIFDSSVNLNSGYVWILGSITLVSLLEAFTTQIDNVILPLY 278
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|1079412526|ref|XP_009143958.2| (PREDICTED: dolichol kinase EVAN-like [Brassica rapa]) HSP 1 Score: 147.902 bits (372), Expect = 1.578e-34 Identity = 107/273 (39.19%), Postives = 147/273 (53.85%), Query Frame = 0
Query: 280 LFAAILLLLLF----PWLTFLLPSHPHPLRWLLTFLLSKP-SYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALH-QPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWT-RRTLEGSAA---FFIATGLGVFTQLGQEGGK-ERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVAL 541
LF A LLL +F W+ F+ H HP W+LTF+ S+P L L W L ++ S +SR + RIL RK +H +A +F LPAL QP FL LA AL++ + LE +R+ R LG P+H + F D RD L+V+H LLL CA P+W+S N P AGIL +G+GD A+ VG G RW T ++T+EG+AA +A + L G +G W + AV +LEA+TAQ+DN +P+ AL
Sbjct: 304 LFFASLLLFMFVAVPSWMQFVHDFHQHPFLWVLTFVFSEPLKRLSLCIYWVLLIVVSVSRFYNISRGSKVERILLRKYYHLMAVLMF-LPALVLQPKFLDLAFGAALAVFIALEIIRIWRIQ-PLGEPLHHFMNAFTDHRDSELLIVSHFSLLLGCALPIWMS--SGFNDRALSPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCYVLVPVLASMGYILSQGWWSLLVAVTATGMLEAYTAQLDNAFIPLVFYAL 572
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|923624828|ref|XP_013748675.1| (PREDICTED: dolichol kinase-like [Brassica napus] >gi|923624831|ref|XP_013748676.1| PREDICTED: dolichol kinase-like [Brassica napus]) HSP 1 Score: 147.517 bits (371), Expect = 2.022e-34 Identity = 107/273 (39.19%), Postives = 147/273 (53.85%), Query Frame = 0
Query: 280 LFAAILLLLLF----PWLTFLLPSHPHPLRWLLTFLLSKP-SYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALH-QPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWT-RRTLEGSAA---FFIATGLGVFTQLGQEGGK-ERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVAL 541
LF A LLL +F W+ F+ H HP W+LTF+ S+P L L W L ++ S +SR + RIL RK +H +A +F LPAL QP FL LA AL++ + LE +R+ R LG P+H + F D RD L+V+H LLL CA P+W+S N P AGIL +G+GD A+ VG G RW T ++T+EG+AA +A + L G +G W + AV +LEA+TAQ+DN +P+ AL
Sbjct: 317 LFFASLLLFMFVAVPSWMQFVHDFHQHPFLWVLTFVFSEPLKRLSLCIYWVLLIVVSVSRFYNISRGSKVERILLRKYYHLMAVLMF-LPALVLQPKFLDLAFGAALAVFIALEIIRIWRIQ-PLGEPLHHFMNAFTDHRDSELLIVSHFSLLLGCALPIWMS--SGFNDRALSPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCYVLVPVLASMGYILSQGWWSLLVAVTATGMLEAYTAQLDNAFIPLVFYAL 585
BLAST of EWM24180.1 vs. NCBI_GenBank
Match: gi|674884222|emb|CDY48280.1| (BnaA05g10740D [Brassica napus]) HSP 1 Score: 147.132 bits (370), Expect = 2.043e-34 Identity = 107/273 (39.19%), Postives = 147/273 (53.85%), Query Frame = 0
Query: 280 LFAAILLLLLF----PWLTFLLPSHPHPLRWLLTFLLSKP-SYLPLLALWSLTLLAFTSAIVPLSRAFSLPRILTRKAFHALATSLFALPALH-QPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWT-RRTLEGSAA---FFIATGLGVFTQLGQEGGK-ERGVWGWVGAVVLLTLLEAFTAQIDNLVLPVYAVAL 541
LF A LLL +F W+ F+ H HP W+LTF+ S+P L L W L ++ S +SR + RIL RK +H +A +F LPAL QP FL LA AL++ + LE +R+ R LG P+H + F D RD L+V+H LLL CA P+W+S N P AGIL +G+GD A+ VG G RW T ++T+EG+AA +A + L G +G W + AV +LEA+TAQ+DN +P+ AL
Sbjct: 293 LFFASLLLFMFVAVPSWMQFVHDFHQHPFLWVLTFVFSEPLKRLSLCIYWVLLIVVSVSRFYNISRGSKVERILLRKYYHLMAVLMF-LPALVLQPKFLDLAFGAALAVFIALEIIRIWRIQ-PLGEPLHHFMNAFTDHRDSELLIVSHFSLLLGCALPIWMS--SGFNDRALSPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCYVLVPVLASMGYILSQGWWSLLVAVTATGMLEAYTAQLDNAFIPLVFYAL 561 The following BLAST results are available for this feature:
BLAST of EWM24180.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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