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Properties
Property Name | Value |
Product | actin binding protein |
Orig transcript id | gnl|cribi|Naga_100253g7.9428.mrna |
Orig protein id | gnl|cribi|Naga_100253g7.9428 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002468.1 | supercontig | CM002468.1:631977..634496 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6492 ID=rna6492|Name=rna6492|organism=Nannochloropsis gaditana|type=mRNA|length=1713bp CCCCTCTGAGACGCCATGGATCTTGATAAATGTCTCATTGTACCGTGTAG CATAAGATATTGCACCTATAGGCATCGCAATCTACCTGTCAAAGATACAT AGCCTTCAAATTGTCCGCTCATGAACTTAGTAACGCATTATCTGAAGACC TTCCCGCCGCACCGTCACCGCCACACAATTCGTTAGGATTCTATTGCGTG CACTGAACCCTGGCCCCTCCATTACGACGCCTGCAGCTTTTGACACGGCA TTTATCGTCCTTTCACGTGGAACCCTCTCGCATACCCTGCATTGCTCCTC ATATAATGTCCTCTTCGTTAATTGTCGGCCTGGTGGGCGGCGGGACTGTC GGCGGGGGGGTTTACGACATCGTCGAACATACGCACAAAGACTTCTTTCG TTCCCTGGGGGCGCACGTGCAAGTGAAACGAATCGCGGTTCGAAACCTGA CAAAGCAACGGGACTTCTCCGTGGCGGCTCACACCGAATTGGTTGGTGAC TGGCGGCTGGTGCTGGACGATCCCGAGATCAACACGGTGATCGAAGTCAT GGGCGGTATCACAGAAGCCAAAGAGGTGGTCTTTGGGGCGATTGCGAAAG GAAAGCATGTGATTACGGCGAACAAAGCACTCCTGGCTGCCTACCTTCCC GAGATTGTGGACCTTCTGAAAAAACATCCTCAGGTCAAATTAGGGTACGA AGCGGCTGTGTGTGGCGGCATCCCCATCATCCACACCCTGCAGAACGACT ATCTGGGGGATCAAGTCTCCCAGATCCTTGGGATTATGAACGGTACGACG AACTTCATGCTGACGAAGATGGAGAGTGGCGCGGATTACGGCCAGGTCCT TGCCGAGGCACAAGCATTGGGCTACGCCGAGGCCGACCCCACAGCCGACG TGGAAGGGCATGACGTGCAGGCTAAAATTGCCCTGCTTGCAAAGCTCGCT TTCGGAGTGCACGTTCCTTCGGACCAGATTCCCACAAAAGGAATTTCGTC TGTGGCCTCTGTGGATTTCGAGTACGCGCGCCTTTTGAACGCCACCATTA AATTGTTGGGGATGGCTCAACTTTCGCCGGACGGGAAAAAGCTTTCGGTG GCAGTCTCGCCTTTCATTGTTCCTCGAGAACATCCCATCGCTGGGACGAA CGGATCCACGAATATTGTCAACATTTCTTCGCGAAACTTGGTGTCTTCCT CTTACATCGGCCCCGGGGCAGGACGCTATCCCACGGCGAACAGTATCGTC AGTGACCTCGTGCGCCTTGCTCGTGGCTTGGTTGGCCCGCCCTTCCCCGT GGATCGCGCCATGCCCCTCGAACCGGACTACACATCACGCTTTTACATCC GACTTCGAATCAGGGATCAGCTGGGCGTGATTCGTGTGGTGGGCGAAATA GCAGAGAGGCATGGCGTCTCTATCTATGCCATCCTACAGAACCCCATCTC TGACCCGAACGACATTCATTTCGTCGTTACGACAGAGCCCGCTCGCCATT CGCAGGTACAGGCTTTTGCGGATGACATCGAAAAACAGGACTTCACCAAG GGCCCACCTCTCTTCTTCGCATTTTTGCTTTGAAGACTAAGTGCATGGGG ATGATGGGGCAAGAAGCTTGCGGAGTAACGAAAATGGAAAAACAATTTGA AGCTGAAATTATTGAACGCTGGAGATCAACTTGAAAGGAACTCAAGTGAA AATGGAGATCTTT back to topprotein sequence of rna6492 >rna6492-protein ID=rna6492-protein|Name=rna6492|organism=Nannochloropsis gaditana|type=polypeptide|length=461bp MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVAL SGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAE DTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSA DGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLD GRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLK NLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPF VFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVP RKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEG GKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLE SRLKAAGLECS back to topmRNA from alignment at CM002468.1:631977..634496+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6492 ID=rna6492|Name=rna6492|organism=Nannochloropsis gaditana|type=mRNA|length=2520bp|location=Sequence derived from alignment at CM002468.1:631977..634496+ (Nannochloropsis gaditana) GTCGcgagggacgaggacggtCGTAACGGCacccatcccctccgcccccg
agCCCACGCTCTCACTACTTACTCAGTGTcatcccgtccttctccccaca
GCGTGCACGGTTGCCCCTATCTCAGGCAACCTTAGCTGGCAAGGAAGACG
CGCCCGTCTTTGTTGTCGATACGtgcccccctcgctcctcgctTCCATCA
TCGTAGTCCTTCTcgatcctcctcgctcctccttctgggTTTCATTCCGC
AGTCTCGACATGTCTCATTTCGTCCGCGCATCCAAATATCGGCATGTATA
TGTTCAGCCCCCGAAAACCGGAGAGGCTTACTCGAACATCCGTCTATCGA
CCGCTGTGGGGGAGCAGAATTACATCAAAGCCAACCCAAAGTACTTTGCA
GTGGCCCTCTCGGTAAGTGCATTTTTTTCGTATAAGTGAACATTTATCAG
TCTTTTTAGTCGGACACTGTTTTCGATTCAAGGCCTAGAGAAGGCTCAAA
GAGATTGCTGAAAAGCTGGGCACTGTACTGCTCTTGATCCACAGCAAGTC
GTGCTTATTACCGTCCTCACGGGCTCATCCCCTGATCGCCCCCTCGATTC
GTAATTTTTTCCTaccagggcggtggaggaccaTTCACGTGCATCCCCTT
CGAAGCAATTGGTgctctccccgccgccccgccAGTTTTCAGCGGCCATA
CTTCGAATGTCCTCGACTTCgatttctctccctttcatgACCATCTGATC
GCATCAGGTGCTGAGGACACTACCGTGAAGGTCTGGGGCATACCTGAAGG
AGGGTTGAAAGAAAGTATCGCCGAGCCCTTGGTCGACTTGCGTGCCCACG
AAAGAAAGGTTACTTTGTTGCGCTTCCATCCCACCGCGGCCAACGTGCTG
GCCAGCGTCAGCGCGGACGGAATGATCAAGCTgtgggacgtggagggagg
gcaggagggagggcagtgcCATGTGCACCAGCAACTGGTCCAAGACGTTC
AGTGGGACTACCGGGGGAACACGTTTGCGACCACATGCAAGGACAAGGTC
CTGCGGGTCCTGGAtgggcggacggggcggtTGGGGttggagaggaagga
tgCACACGAAGGGTCTAAGAGCAGCAAGTGCGTCTTTCTCGGGGACCGAG
AGATGCTGCTAACAGTCGGCTTCACCAAACAAAGTCGCCGTCAGGTAAGG
GGTTTGAATGGGGGCTGGAATCATGAGCGGGCTCGTCCAGGGTTCTCAGT
TCCTTTTTCGGAAACGCGTTTTCTCGCTGATTTTTTTTActctcattttt
cctccttgtgtGCCAGCTCAAGATATGGGACCTAAAGAATCTGAAGCAGG
AGGTGAAGACCCTGGACATCGACcaggcggcgggcgccaTCATGCCTTTC
TTCGACTCCGACACCAacctcctctacctcgctGGCAAGGtgcgcttcct
ccgtccttccctcttttccccttctcaaTATTGTCGCATGCTATCGCGGC
TGTCCACAAAATGGCTTTATGCTAGACAGACCCCCCTTCACTCATATTTA
TTCTTCCCACGCATCAGGGCGACGGCAATATCCGCTACTACGAGATTGTC
TCGGAAGCCCCCTTTGTCTTTCCCATCTCCGAGTATCGCTCCACTACCCC
CTCCAAAGGCTGTTGCTTGGTGCCCAAGCGCGGGTTGAACGTGCTCCGCT
GCGAGACCGCTCGTGTCCTCAAGCTCACCACTAGCAGCGTGGaacccctc
tccttcatcgTCCCCCGCAAGGGCGGCTTTTTCCAGGACgaccttttccc
cccctcaaTGGCGGGCCTTCCCTCGCATTCGGCACCGGAATGGTGGGCAG
GCTCTGATAAGGCGCCCTTGCTCATGTCTTTGGACCCCGCggtcagggag
ggcgggaaggagggtgggaaggataTGGGGTGGAGAGGGGTAGGCTCGCC
GTTGGGGTCATCAGGAGGCAGCCTTGGGAACCGTCCGCcatcggggggag
ggaggaccacGGGACAGCTGCAAAAGGAGCTGGACGTGGCTTTGGCGAGG
ATCTCGTTGTTGGAAAGCCGACTGAAAGCTGCAGGACTGGAGTGTTCTTG
AGcgagggatgaaggggcgtggagggtgTGATATAGATAGGGCGTGCCAG
ACCACGCTTTGGCCGCGTGCGCGAAGAAAGGCCGGCaaaaaggaatggaa
aaTTGCATAAATGTAACGCGACAGGATTAAAAGACAGCAGTTAAAGTCGA
GCATCAAAgtgaagatgaggaaggagggaggaagtgcgaGGGTAAGAAGA
GTCTAGTCACTTTAGCCCAAGACACAGGGGATGACCGTTGTATCAATATA
ATTGGCATGCGTTGTTGCATCATACCACTCGAAAAGGTAAGCCgcagaaa
gaaaggcgggcGTCACAACGAATTATAGGCGAAAGCACAGGGTTTTGACG
ACGGAGAGTGAGAGATGTCCGAATGTGGAAGTTGATATATACATTAGCGC
CGCGCCATTGTGTCCGTCGT back to topCoding sequence (CDS) from alignment at CM002468.1:631977..634496+ >rna6492 ID=rna6492|Name=rna6492|organism=Nannochloropsis gaditana|type=CDS|length=5544bp|location=Sequence derived from alignment at CM002468.1:631977..634496+ (Nannochloropsis gaditana) ATGTCTCATTTCGTCCGCGCATCCAAATATCGGCATGTATATGTTCAGCC CCCGAAAACCGGAGAGGCTTACTCGAACATCCGTCTATCGACCGCTGTGG GGGAGCAGAATTACATCAAAGCCAACCCAAAGTACTTTGCAGTGGCCCTC TCGggcggtggaggaccaTTCACGTGCATCCCCTTCGAAGCAATTGGTgc tctccccgccgccccgccAGTTTTCAGCGGCCATACTTCGAATGTCCTCG ACTTCgatttctctccctttcatgACCATCTGATCGCATCAGGTGCTGAG GACACTACCGTGAAGGTCTGGGGCATACCTGAAGGAGGGTTGAAAGAAAG TATCGCCGAGCCCTTGGTCGACTTGCGTGCCCACGAAAGAAAGGTTACTT TGTTGCGCTTCCATCCCACCGCGGCCAACGTGCTGGCCAGCGTCAGCGCG GACGGAATGATCAAGCTgtgggacgtggagggagggcaggagggagggca gtgcCATGTGCACCAGCAACTGGTCCAAGACGTTCAGTGGGACTACCGGG GGAACACGTTTGCGACCACATGCAAGGACAAGGTCCTGCGGGTCCTGGAt gggcggacggggcggtTGGGGttggagaggaaggatgCACACGAAGGGTC TAAGAGCAGCAAGTGCGTCTTTCTCGGGGACCGAGAGATGCTGCTAACAG TCGGCTTCACCAAACAAAGTCGCCGTCAGCTCAAGATATGGGACCTAAAG AATCTGAAGCAGGAGGTGAAGACCCTGGACATCGACcaggcggcgggcgc caTCATGCCTTTCTTCGACTCCGACACCAacctcctctacctcgctGGCA AGGGCGACGGCAATATCCGCTACTACGAGATTGTCTCGGAAGCCCCCTTT GTCTTTCCCATCTCCGAGTATCGCTCCACTACCCCCTCCAAAGGCTGTTG CTTGGTGCCCAAGCGCGGGTTGAACGTGCTCCGCTGCGAGACCGCTCGTG TCCTCAAGCTCACCACTAGCAGCGTGGaacccctctccttcatcgTCCCC CGCAAGGGCGGCTTTTTCCAGGACgaccttttccccccctcaaTGGCGGG CCTTCCCTCGCATTCGGCACCGGAATGGTGGGCAGGCTCTGATAAGGCGC CCTTGCTCATGTCTTTGGACCCCGCggtcagggagggcgggaaggagggt gggaaggataTGGGGTGGAGAGGGGTAGGCTCGCCGTTGGGGTCATCAGG AGGCAGCCTTGGGAACCGTCCGCcatcggggggagggaggaccacGGGAC AGCTGCAAAAGGAGCTGGACGTGGCTTTGGCGAGGATCTCGTTGTTGGAA AGCCGACTGAAAGCTGCAGGACTGGAGTGTTCTTGAATGTCTCATTTCGT CCGCGCATCCAAATATCGGCATGTATATGTTCAGCCCCCGAAAACCGGAG AGGCTTACTCGAACATCCGTCTATCGACCGCTGTGGGGGAGCAGAATTAC ATCAAAGCCAACCCAAAGTACTTTGCAGTGGCCCTCTCGggcggtggagg accaTTCACGTGCATCCCCTTCGAAGCAATTGGTgctctccccgccgccc cgccAGTTTTCAGCGGCCATACTTCGAATGTCCTCGACTTCgatttctct ccctttcatgACCATCTGATCGCATCAGGTGCTGAGGACACTACCGTGAA GGTCTGGGGCATACCTGAAGGAGGGTTGAAAGAAAGTATCGCCGAGCCCT TGGTCGACTTGCGTGCCCACGAAAGAAAGGTTACTTTGTTGCGCTTCCAT CCCACCGCGGCCAACGTGCTGGCCAGCGTCAGCGCGGACGGAATGATCAA GCTgtgggacgtggagggagggcaggagggagggcagtgcCATGTGCACC AGCAACTGGTCCAAGACGTTCAGTGGGACTACCGGGGGAACACGTTTGCG ACCACATGCAAGGACAAGGTCCTGCGGGTCCTGGAtgggcggacggggcg gtTGGGGttggagaggaaggatgCACACGAAGGGTCTAAGAGCAGCAAGT GCGTCTTTCTCGGGGACCGAGAGATGCTGCTAACAGTCGGCTTCACCAAA CAAAGTCGCCGTCAGCTCAAGATATGGGACCTAAAGAATCTGAAGCAGGA GGTGAAGACCCTGGACATCGACcaggcggcgggcgccaTCATGCCTTTCT TCGACTCCGACACCAacctcctctacctcgctGGCAAGGGCGACGGCAAT ATCCGCTACTACGAGATTGTCTCGGAAGCCCCCTTTGTCTTTCCCATCTC CGAGTATCGCTCCACTACCCCCTCCAAAGGCTGTTGCTTGGTGCCCAAGC GCGGGTTGAACGTGCTCCGCTGCGAGACCGCTCGTGTCCTCAAGCTCACC ACTAGCAGCGTGGaacccctctccttcatcgTCCCCCGCAAGGGCGGCTT TTTCCAGGACgaccttttccccccctcaaTGGCGGGCCTTCCCTCGCATT CGGCACCGGAATGGTGGGCAGGCTCTGATAAGGCGCCCTTGCTCATGTCT TTGGACCCCGCggtcagggagggcgggaaggagggtgggaaggataTGGG GTGGAGAGGGGTAGGCTCGCCGTTGGGGTCATCAGGAGGCAGCCTTGGGA ACCGTCCGCcatcggggggagggaggaccacGGGACAGCTGCAAAAGGAG CTGGACGTGGCTTTGGCGAGGATCTCGTTGTTGGAAAGCCGACTGAAAGC TGCAGGACTGGAGTGTTCTTGAATGTCTCATTTCGTCCGCGCATCCAAAT ATCGGCATGTATATGTTCAGCCCCCGAAAACCGGAGAGGCTTACTCGAAC ATCCGTCTATCGACCGCTGTGGGGGAGCAGAATTACATCAAAGCCAACCC AAAGTACTTTGCAGTGGCCCTCTCGggcggtggaggaccaTTCACGTGCA TCCCCTTCGAAGCAATTGGTgctctccccgccgccccgccAGTTTTCAGC GGCCATACTTCGAATGTCCTCGACTTCgatttctctccctttcatgACCA TCTGATCGCATCAGGTGCTGAGGACACTACCGTGAAGGTCTGGGGCATAC CTGAAGGAGGGTTGAAAGAAAGTATCGCCGAGCCCTTGGTCGACTTGCGT GCCCACGAAAGAAAGGTTACTTTGTTGCGCTTCCATCCCACCGCGGCCAA CGTGCTGGCCAGCGTCAGCGCGGACGGAATGATCAAGCTgtgggacgtgg agggagggcaggagggagggcagtgcCATGTGCACCAGCAACTGGTCCAA GACGTTCAGTGGGACTACCGGGGGAACACGTTTGCGACCACATGCAAGGA CAAGGTCCTGCGGGTCCTGGAtgggcggacggggcggtTGGGGttggaga ggaaggatgCACACGAAGGGTCTAAGAGCAGCAAGTGCGTCTTTCTCGGG GACCGAGAGATGCTGCTAACAGTCGGCTTCACCAAACAAAGTCGCCGTCA GCTCAAGATATGGGACCTAAAGAATCTGAAGCAGGAGGTGAAGACCCTGG ACATCGACcaggcggcgggcgccaTCATGCCTTTCTTCGACTCCGACACC AacctcctctacctcgctGGCAAGGGCGACGGCAATATCCGCTACTACGA GATTGTCTCGGAAGCCCCCTTTGTCTTTCCCATCTCCGAGTATCGCTCCA CTACCCCCTCCAAAGGCTGTTGCTTGGTGCCCAAGCGCGGGTTGAACGTG CTCCGCTGCGAGACCGCTCGTGTCCTCAAGCTCACCACTAGCAGCGTGGa acccctctccttcatcgTCCCCCGCAAGGGCGGCTTTTTCCAGGACgacc ttttccccccctcaaTGGCGGGCCTTCCCTCGCATTCGGCACCGGAATGG TGGGCAGGCTCTGATAAGGCGCCCTTGCTCATGTCTTTGGACCCCGCggt cagggagggcgggaaggagggtgggaaggataTGGGGTGGAGAGGGGTAG GCTCGCCGTTGGGGTCATCAGGAGGCAGCCTTGGGAACCGTCCGCcatcg gggggagggaggaccacGGGACAGCTGCAAAAGGAGCTGGACGTGGCTTT GGCGAGGATCTCGTTGTTGGAAAGCCGACTGAAAGCTGCAGGACTGGAGT GTTCTTGAATGTCTCATTTCGTCCGCGCATCCAAATATCGGCATGTATAT GTTCAGCCCCCGAAAACCGGAGAGGCTTACTCGAACATCCGTCTATCGAC CGCTGTGGGGGAGCAGAATTACATCAAAGCCAACCCAAAGTACTTTGCAG TGGCCCTCTCGggcggtggaggaccaTTCACGTGCATCCCCTTCGAAGCA ATTGGTgctctccccgccgccccgccAGTTTTCAGCGGCCATACTTCGAA TGTCCTCGACTTCgatttctctccctttcatgACCATCTGATCGCATCAG GTGCTGAGGACACTACCGTGAAGGTCTGGGGCATACCTGAAGGAGGGTTG AAAGAAAGTATCGCCGAGCCCTTGGTCGACTTGCGTGCCCACGAAAGAAA GGTTACTTTGTTGCGCTTCCATCCCACCGCGGCCAACGTGCTGGCCAGCG TCAGCGCGGACGGAATGATCAAGCTgtgggacgtggagggagggcaggag ggagggcagtgcCATGTGCACCAGCAACTGGTCCAAGACGTTCAGTGGGA CTACCGGGGGAACACGTTTGCGACCACATGCAAGGACAAGGTCCTGCGGG TCCTGGAtgggcggacggggcggtTGGGGttggagaggaaggatgCACAC GAAGGGTCTAAGAGCAGCAAGTGCGTCTTTCTCGGGGACCGAGAGATGCT GCTAACAGTCGGCTTCACCAAACAAAGTCGCCGTCAGCTCAAGATATGGG ACCTAAAGAATCTGAAGCAGGAGGTGAAGACCCTGGACATCGACcaggcg gcgggcgccaTCATGCCTTTCTTCGACTCCGACACCAacctcctctacct cgctGGCAAGGGCGACGGCAATATCCGCTACTACGAGATTGTCTCGGAAG CCCCCTTTGTCTTTCCCATCTCCGAGTATCGCTCCACTACCCCCTCCAAA GGCTGTTGCTTGGTGCCCAAGCGCGGGTTGAACGTGCTCCGCTGCGAGAC CGCTCGTGTCCTCAAGCTCACCACTAGCAGCGTGGaacccctctccttca tcgTCCCCCGCAAGGGCGGCTTTTTCCAGGACgaccttttccccccctca aTGGCGGGCCTTCCCTCGCATTCGGCACCGGAATGGTGGGCAGGCTCTGA TAAGGCGCCCTTGCTCATGTCTTTGGACCCCGCggtcagggagggcggga aggagggtgggaaggataTGGGGTGGAGAGGGGTAGGCTCGCCGTTGGGG TCATCAGGAGGCAGCCTTGGGAACCGTCCGCcatcggggggagggaggac cacGGGACAGCTGCAAAAGGAGCTGGACGTGGCTTTGGCGAGGATCTCGT TGTTGGAAAGCCGACTGAAAGCTGCAGGACTGGAGTGTTCTTGA back to top
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