EWM24197.1, cds6476 (CDS) Nannochloropsis gaditana

Overview
NameEWM24197.1
Unique Namecds6476
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:632236..632388 +
Alignment locationCM002468.1:632595..633170 +
Alignment locationCM002468.1:633293..633415 +
Alignment locationCM002468.1:633544..634077 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24197.1
Productactin binding protein
Orig transcript idgnl|cribi|Naga_100253g7.9428.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:632236..632388 +
CM002468.1supercontigCM002468.1:632595..633170 +
CM002468.1supercontigCM002468.1:633293..633415 +
CM002468.1supercontigCM002468.1:633544..634077 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015505Coronin
IPR015049DUF1900
IPR015943WD40/YVTN_repeat-like_dom
IPR015048DUF1899
IPR001680WD40_repeat
Homology
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|585105585|gb|EWM24197.1| (actin binding protein [Nannochloropsis gaditana])

HSP 1 Score: 948.732 bits (2451), Expect = 0.000e+0
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLECS 461
            MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLECS
Sbjct:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLECS 461          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|1173948400|gb|OQR96530.1| (coronin-like protein [Achlya hypogyna])

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 252/464 (54.31%), Postives = 336/464 (72.41%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVE-GGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDP----AVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLE 459
            MS FVRASKYRHVY++P K  + Y+N+RL+TA GEQNYIK N K+FA+A+  GGG F  +P+E +G      P+  GH   ++DFDF+PFH+HLIAS ++DTT+KVWGIPEGGL E++ EPLVDL  H RKVTL  FHPTAANVLAS SAD  ++LWD+E G Q     H  + LVQD+ W++ G+T ATTCKDKV+R+ D R+G++  ++++AHEGSKS K  FLG++++  TVGF++QS+R+LK+WD + L +E+K +DIDQAAG IMPFFD+DTN+LYL GKGDGNIRYYE+    PF +P++EYRST  ++G  ++PKRG +++ CET R+LKLTT+SVEPL   VPRK   FQDD++P + AG+PSH+A EW AGS+K P+L SL+P     +   GKEG      R        S  +     PS  G++   LQ ELD A ARI+ LE++L AA ++
Sbjct:    1 MSQFVRASKYRHVYMEPAKVEKCYTNLRLATATGEQNYIKGNTKFFAIAIQAGGGAFAVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLTETMTEPLVDLTGHGRKVTLTYFHPTAANVLASTSADYTVRLWDIEKGAQIVNMEHNTENLVQDMAWNWTGSTLATTCKDKVVRLYDARSGQVSAQKENAHEGSKSVKMTFLGEKDLFATVGFSRQSQRRLKVWDPRKLDKELKKIDIDQAAGVIMPFFDADTNILYLCGKGDGNIRYYEMNDADPFAYPLNEYRSTVAARGMAMIPKRGCDIMSCETTRLLKLTTNSVEPLHVYVPRKSDAFQDDIYPDTYAGVPSHTADEWLAGSEKGPVLSSLNPRTFGEITSHGKEGT--AAARPTRVTRTPSETAKAPAAPSSTGKSAAALQAELDAANARIAELEAKLTAANID 462          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|813178604|ref|XP_012205771.1| (hypothetical protein SPRG_11375 [Saprolegnia parasitica CBS 223.65] >gi|641529267|gb|KDO23448.1| hypothetical protein SPRG_11375 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 251/464 (54.09%), Postives = 338/464 (72.84%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVE-GGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDP----AVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLE 459
            MS FVRASKYRHVY++P K  ++Y+N+RL+TA GEQNYIK N K+FAVA+  GGG F  +P+E +G      P+  GH   ++DFDF+PFH+HLIAS ++DTT+KVWGIPEGGL E++ EPLVDL  H RKVTL  FHPTA+NVLAS SAD  ++LWD+E G Q     H  + LVQD+ W++ G+T ATTCKDKV+R+ D R+G++  ++++AHEGSKS K  FLG++++  TVGF++QS+R+LK+WD + L +E+K +DIDQAAG IMPFFD+DTN+LYL GKGDGNIRYYE+    PF +P++EYRST  ++G  ++PKRG +++ CET R+LKLTT++VEPL   VPRK   FQDD++P + AG+PSH+A EW AGS+K P+L SL+P     +   GKEG      R        S G+     P+  G++   LQ ELD A ARI+ LE++L AA ++
Sbjct:    1 MSQFVRASKYRHVYMEPAKIEKSYTNLRLATATGEQNYIKGNTKFFAVAIQAGGGAFAVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLTETMTEPLVDLTGHGRKVTLTYFHPTASNVLASTSADYTVRLWDIEKGSQIVNMEHNTENLVQDMAWNWTGSTLATTCKDKVVRLYDARSGQVSAQKENAHEGSKSVKLTFLGEKDLFATVGFSRQSQRRLKVWDPRKLDKELKKIDIDQAAGVIMPFFDADTNILYLCGKGDGNIRYYEMNDADPFAYPLNEYRSTVAARGMAMIPKRGCDIMSCETTRLLKLTTNAVEPLHVYVPRKSDAFQDDIYPDTYAGVPSHTADEWLAGSEKGPVLSSLNPRTFGEITSHGKEG--TAAARPTRVTRTPSSGTSAPPAPAASGKSASALQAELDAANARIAELEAKLTAANID 462          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|669168971|ref|XP_008619834.1| (hypothetical protein SDRG_15440 [Saprolegnia diclina VS20] >gi|530728468|gb|EQC26710.1| hypothetical protein SDRG_15440 [Saprolegnia diclina VS20])

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 249/464 (53.66%), Postives = 336/464 (72.41%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVE-GGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDP----AVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGLE 459
            MS FVRASKYRHVY++P K  ++Y+N+RL+TA GEQNYIK N K+FAVA+  GGG F  +P+E +G      P+  GH   ++DFDF+PFH+HLIAS ++DTT+KVWGIPEGGL E++ EPLVDL  H RKVTL  FHPTA+NVLAS SAD  ++LWD+E G Q     H  + LVQD+ W++ G+T ATTCKDKV+R+ D R+G++  ++++AHEGSKS K  FLG++++  TVGF++QS+R+LK+WD + L +E+K +DIDQAAG IMPFFD+DTN+LYL GKGDGNIRYYE+    PF +P++EYRST  ++G  ++PKRG +++ CET R+LKLTT++VEPL   VPRK   FQDD++P + AG+PSH+A EW AGS+K P+L SL+P     +   GKEG           P   +        P+  G++   LQ ELD A ARI+ LE++L AA ++
Sbjct:    1 MSQFVRASKYRHVYMEPAKIEKSYTNLRLATATGEQNYIKGNTKFFAVAIQAGGGAFAVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLTETMTEPLVDLTGHGRKVTLTYFHPTASNVLASTSADYTVRLWDIEKGSQIVNMEHNTENLVQDMAWNWTGSTLATTCKDKVVRLYDARSGQVSAQKENAHEGSKSVKLTFLGEKDLFATVGFSRQSQRRLKVWDPRKLDKELKKIDIDQAAGVIMPFFDADTNILYLCGKGDGNIRYYEMNDADPFAYPLNEYRSTVAARGMAMIPKRGCDIMSCETTRLLKLTTNAVEPLHVYVPRKSDAFQDDIYPDTYAGVPSHTADEWLAGSEKGPVLSSLNPHTFGEITSHGKEG------TAAARPTRVTRTPSSTAAPASSGKSAAALQAELDAANARIAELEAKLTAANID 458          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|1173960024|gb|OQS06192.1| (coronin [Thraustotheca clavata])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 252/452 (55.75%), Postives = 332/452 (73.45%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGG-QEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDP----AVREGGKEGGKDMG-WRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARI 446
            MS FVRASKYRHVY++P K  + Y+NIRL+TA GEQNYIK N K+FA+A+  GGG F  +P+E +G      P+  GH   ++DFDF+PFH+HLIAS ++DTT+KVWGIPEGGL E++ EPLVDL  H RKVTL  FHPTAANVLAS SAD  ++LWD+E G Q     H  + LVQD+ W++ G+T ATTCKDKV+R+ D R+G++  ++++AHEGSKS K  FLG++E+ +TVGF++QS+R+LK+WD + L +E+K +DIDQAAG IMPFFD+DTN+LYL GKGDGNIRYYE+    PF +P++EYRSTT ++G  ++PKRG +++ CETAR+LKLT +SVEPL   VPRK   FQDD++P + AG+PSH+A EW AGS+K P+L SL+P     +   GKEG       R   +P  +S  S      S  G+++ QLQ ELD A ARI
Sbjct:    1 MSQFVRASKYRHVYMEPAKIEKCYTNIRLATATGEQNYIKGNTKFFAIAIQAGGGAFAVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLSETMTEPLVDLTGHGRKVTLTYFHPTAANVLASTSADYTVRLWDIEKGCQIVNMEHNTENLVQDMAWNWTGSTLATTCKDKVVRLYDARSGQVAAQKENAHEGSKSVKLTFLGEKELFVTVGFSRQSQRRLKVWDPRKLDKELKKIDIDQAAGVIMPFFDADTNVLYLCGKGDGNIRYYEMNDADPFAYPLNEYRSTTAARGMAMIPKRGCDIMSCETARLLKLTNNSVEPLHVYVPRKSDAFQDDIYPDTYAGVPSHTADEWLAGSEKGPVLSSLNPRTFGEITSTGKEGTASARPTRVTRAPSDTSKAS------SSHGKSSAQLQAELDAANARI 446          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|299117593|emb|CBN75435.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 251/461 (54.45%), Postives = 333/461 (72.23%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVG---SPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGL 458
            MSHFVRASKYRHVYV+ PK    ++ I ++T  GEQ+YIK N KY AVA+ GGGGPF  +P+   G      P+ SGHT++VLDFDF+PFH+ L+AS +ED TVKVWGIPE G  E+  E L+DL+ H RKVTLLRFHPTA NVLASVSAD  +KLWD+E G        H+QL+QD+ WD+ GNT+AT+CKDK LR++D R+ ++      AHEG++SSK  +LG +E L++VGFTKQS+RQ K+WD +NL +E+K ++IDQAAG I+PF+D +++LLYLAGKGDGNIRYYE V E P+ F ISE+RSTT +KG  ++PKRGLNV++CETAR+LKLT++S+EPLSF+VPRK   FQDDLFPP  +G  SH+A EW  GS+KAP+ M + P               R +G    P+ ++  +   +      +++  +QK+LD A+AR++LLE  +K AGL
Sbjct:    1 MSHFVRASKYRHVYVESPKAEACWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFTETETEALIDLQGHGRKVTLLRFHPTANNVLASVSADMTVKLWDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKMEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYECVDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCFSGQASHTAEEWVKGSEKAPMKMDMRP---------------RNLGVSLDPVAAAAAAAKKKKAFAPLKSSKDMQKDLDAAMARVALLEKVIKDAGL 446          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|953494433|emb|CEG44027.1| (Actin-binding protein Coronin, contains WD40 repeats [Plasmopara halstedii])

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 246/463 (53.13%), Postives = 332/463 (71.71%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVH-QQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRT----TGQLQKELDVALARISLLESRLKAAGL 458
            MSHFVR SK+RHVY++P K    Y+N+RL+TA GEQNYIK N K+FAV++  GGG    +P+E +G      P+ SGH   +LDFDF+PFH+HLIAS ++D+TVKVWGIPEGGL E+  +PLVDL  H RKVTL++FHPTA NVLAS S+D  ++LWD+E G E  +   H + L+QD+ W + G+  AT+CKDKV+R+ D R+G+L L++ +AH G+KS K  FLGD+E  ++VGFT+QS+RQ K+WD +NL +E+K +DIDQAAG IMPF+D DTNLLYL GKGDGNIRYYE+    PF FPISEYRSTT +KG  ++PKRG ++++CET R+LKLT++++EPL   VPRK   FQDD+FP + AG+PS SA +W  G+D +P+LMSL P ++      GK        S +G+   +   R   GG ++     G+L+ EL+ A ARI+ LE  L+  G+
Sbjct:    1 MSHFVRQSKFRHVYIEPAKLESCYTNVRLATATGEQNYIKGNTKFFAVSIQAGGGAMAVVPYEKVGKFDPDFPLISGHRGAILDFDFNPFHEHLIASASDDSTVKVWGIPEGGLTETCVDPLVDLTGHGRKVTLIKFHPTANNVLASTSSDFSVRLWDIEKGSETVKMEDHGENLIQDLAWSWTGSLLATSCKDKVIRLYDARSGQLALQKDNAHMGTKSVKMSFLGDKETFVSVGFTRQSQRQFKVWDPRNLDKELKKVDIDQAAGVIMPFYDPDTNLLYLCGKGDGNIRYYEMSEGEPFAFPISEYRSTTSAKGMAMIPKRGCDIMKCETTRLLKLTSNAIEPLHVFVPRKSDAFQDDIFPDTYAGIPSMSADDWLNGADNSPVLMSLRPELQGKITNDGKRNRSASKTSSVGAGIAARVARFARGGSKSDSTPEGKLKSELEAANARIAQLEKLLRQNGI 463          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|695404080|ref|XP_009523442.1| (hypothetical protein PHYSODRAFT_285516 [Phytophthora sojae] >gi|348680909|gb|EGZ20725.1| hypothetical protein PHYSODRAFT_285516 [Phytophthora sojae])

HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0
Identity = 246/463 (53.13%), Postives = 332/463 (71.71%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVH-QQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRT----TGQLQKELDVALARISLLESRLKAAGL 458
            MSHFVR SK+RHVYV+P K    Y+N+RL+TA GEQNYIK N K+FAV++  GGG    +P++ +G      P+ SGH   +LDFDF+PFH+HLIAS ++DTTVK+WGIPEGGL E+  +PLVDL  H RKVTL++FHPTA NVLAS S+D  ++LWD+E G E  +   H + L+QD+ W + G+  ATTCKDKV+R+ D R+G++  ++++AH G+KS K  FLG++E  +TVGFT+QS+RQ K+WD +NL +E+K +DIDQAAG IMPF+D DTNLLYL GKGDGNIRYYE+    PF FPISEYRSTT +KG  ++PKRG ++++CET R+LKLT++++EPL   VPRK   FQDD+FP + AG+PS +A +W  G+D +P+LMSL P ++      GK        + +GS   +   R   GG +T     G+L+ ELD A ARI+ LE  L+  G+
Sbjct:    1 MSHFVRQSKFRHVYVEPAKLEYCYTNVRLATATGEQNYIKGNTKFFAVSIQAGGGAMAVVPYDKVGKFDPDFPLISGHRGAILDFDFNPFHEHLIASASDDTTVKIWGIPEGGLAETCVDPLVDLTGHGRKVTLIKFHPTANNVLASTSSDFSVRLWDIEKGAEIVKMEDHGENLIQDLAWSWTGSVLATTCKDKVVRLYDARSGQVAAQKENAHMGTKSVKMSFLGNKETFVTVGFTRQSQRQFKVWDPRNLDKELKKVDIDQAAGVIMPFYDPDTNLLYLCGKGDGNIRYYEMSEGEPFAFPISEYRSTTSAKGMAMIPKRGCDIMKCETTRLLKLTSNAIEPLHVFVPRKSDAFQDDIFPDTYAGIPSMTADDWLGGADNSPVLMSLRPEMQGKITNDGKRARSASKSNSVGSGIAARVARFARGGSKTDNTPEGKLKAELDTANARIAQLEKLLRENGI 463          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|970661410|gb|KUF98882.1| (Urease accessory protein UreD [Phytophthora nicotianae])

HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0
Identity = 244/463 (52.70%), Postives = 330/463 (71.27%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVH-QQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRT----TGQLQKELDVALARISLLESRLKAAGL 458
            MSHFVR SK+RHVY++P K    Y+N+RL+TA GEQNYIK N K+FAV++  GGG    +P++ +G      P+ SGH   +LDFDF+PFH+HLIAS ++DTT+KVWGIPEGGL E+  +PLVDL  H RKVTL++FHPTA NVLAS S+D   +LWD+E G E  +   H + L+QD+ W + G+  ATTCKDKV+R+ D R+G++  ++++AH G+KS K  FLG +E  +TVGFT+QS+RQ K+WD +NL +E+K +DIDQAAG IMPF+D DTNLLYL GKGDGNIRYYE+    PF FPISEYRSTT +KG  ++PKRG ++++CET R+LKLT++++EPL   VPRK   FQDD+FP + AG+PS +A +W  G+D +P+LMSL P ++      GK        + +G+   +   R   GG +T     G+L+ ELD A ARI+ LE  L+  G+
Sbjct:    1 MSHFVRQSKFRHVYIEPAKLESCYTNVRLATATGEQNYIKGNTKFFAVSIQAGGGAMAVVPYDKVGKFDPDFPLISGHRGAILDFDFNPFHEHLIASASDDTTIKVWGIPEGGLAETCVDPLVDLTGHGRKVTLIKFHPTANNVLASTSSDFSTRLWDIEKGSEIVKMEDHGENLIQDLAWSWTGSLLATTCKDKVVRLYDARSGQIAAQKENAHMGTKSVKMSFLGSKETFVTVGFTRQSQRQFKVWDPRNLDKELKKVDIDQAAGVIMPFYDPDTNLLYLCGKGDGNIRYYEMSEGEPFAFPISEYRSTTSAKGMAMIPKRGCDIMKCETTRLLKLTSNAIEPLHVFVPRKSDAFQDDIFPDTYAGIPSMTADDWLGGADNSPVLMSLRPEMQGKVTNDGKRSRSASKANSVGAGIAARVARFARGGSKTDNTPEGKLKAELDTANARIAELEKLLRDNGI 463          
BLAST of EWM24197.1 vs. NCBI_GenBank
Match: gi|1214703609|gb|OWZ15596.1| (Coronin [Phytophthora megakarya])

HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0
Identity = 244/463 (52.70%), Postives = 329/463 (71.06%), Query Frame = 0
Query:    1 MSHFVRASKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVH-QQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRT----TGQLQKELDVALARISLLESRLKAAGL 458
            MSHFVR SK+RHVYV+P K    Y+N+RL+TA GEQNYIK N K+FAV++  GGG    +P+E +G      P+ SGH   +LDFDF+PFH+HLIAS ++DTTVK+WGIPEGGL E+  +PLVDL  H RKVTL++FHPTA NVLAS S+D   +LWD+E G E  +   H + L+QD+ W + G+  ATTCKDKV+R+ D R+G++  ++++AH G+KS K  FLG +E  +TVGFT+QS+RQ K+WD +NL +E+K +DIDQAAG IMPF+D DTNLLYL GKGDGNIRYYE+    PF FPISEYRSTT +KG  ++PKRG ++++CET R+LKLT++++EPL   VPRK   FQDD+FP + AG+PS +A +W  G+D +P+LMSL P ++      GK        + +G+   +   R   GG +      G+L+ EL+ A ARI+ LE  L+  G+
Sbjct:    1 MSHFVRQSKFRHVYVEPAKLESCYTNVRLATATGEQNYIKGNTKFFAVSIQAGGGAMAVVPYEKVGKFDPDFPLISGHRGAILDFDFNPFHEHLIASASDDTTVKIWGIPEGGLTETCVDPLVDLTGHGRKVTLIKFHPTANNVLASTSSDFSTRLWDIEKGSEIVKLEDHGENLIQDLAWSWTGSLLATTCKDKVVRLYDARSGQVAAQKENAHMGTKSVKMSFLGSKETFVTVGFTRQSQRQFKVWDPRNLDKELKKVDIDQAAGVIMPFYDPDTNLLYLCGKGDGNIRYYEMSEGEPFAFPISEYRSTTSAKGMAMIPKRGCDIMKCETTRLLKLTSNAIEPLHVFVPRKSDAFQDDIFPDTYAGIPSMTADDWVGGADNSPVLMSLRPELQGKITNDGKRSRSASKSNSVGAGIAARVARFARGGNKNDNTPEGKLKSELETANARIAQLEKLLRENGI 463          
The following BLAST results are available for this feature:
BLAST of EWM24197.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105585|gb|EWM24197.1|0.000e+0100.00actin binding protein [Nannochloropsis gaditana][more]
gi|1173948400|gb|OQR96530.1|0.000e+054.31coronin-like protein [Achlya hypogyna][more]
gi|813178604|ref|XP_012205771.1|0.000e+054.09hypothetical protein SPRG_11375 [Saprolegnia paras... [more]
gi|669168971|ref|XP_008619834.1|0.000e+053.66hypothetical protein SDRG_15440 [Saprolegnia dicli... [more]
gi|1173960024|gb|OQS06192.1|0.000e+055.75coronin [Thraustotheca clavata][more]
gi|299117593|emb|CBN75435.1|0.000e+054.45conserved unknown protein [Ectocarpus siliculosus][more]
gi|953494433|emb|CEG44027.1|0.000e+053.13Actin-binding protein Coronin, contains WD40 repea... [more]
gi|695404080|ref|XP_009523442.1|0.000e+053.13hypothetical protein PHYSODRAFT_285516 [Phytophtho... [more]
gi|970661410|gb|KUF98882.1|0.000e+052.70Urease accessory protein UreD [Phytophthora nicoti... [more]
gi|1214703609|gb|OWZ15596.1|0.000e+052.70Coronin [Phytophthora megakarya][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6492rna6492Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications