|
|
Properties
| Property Name | Value |
|---|
| Product | mitochondrial carrier protein |
| Orig transcript id | gnl|cribi|Naga_100253g2.9431.mrna |
| Orig protein id | gnl|cribi|Naga_100253g2.9431 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:622688..624397 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6488 ID=rna6488|Name=rna6488|organism=Nannochloropsis gaditana|type=mRNA|length=1047bp
ATGGGGGAGGAAATGATGGCGTATCTGGACGAGATCACCATGCTCAAGAC
TCGACTCCAGGAGGGAGAGCGGGTTCACGCGGACCGGACGCGGGAGCTGG
AGGCAGCATGGAAAGCCGCCGAGAAGGAGTCGGGGGCACGGGCCGCGCGT
GTGGCGGTCCTCGCGAATGAGGTGCAAGGGATACAGGAGCGGCTTGACCA
GCAGCAGGCGGCGGACTACGACGCCAAAGCCATGATGCAAGCCGAGCTGA
CCCGTCAACTGCAGGAGGCAGAGTGGAAGCACACCAAGGCGATGGCAGAC
CTCCAGCAGGAGCTGGCCGAAGCAGCTGCGCGTGGGGCAGAAGCTGCTCG
TTTCAAGGCCGCGTTAGGCAGCAGTCAGTCCCAAGTGGAGGCTTTGCGGG
AGTCGCTGGTCGAGTCGAAAGCGGCGTTGGAGGCCGCAAGCGTCAAGGGA
AATGCGGCGGAAGAGAGGTCTCGGTCACTGGCCCACCAATTGGGCGAGGC
CCTGGCGCGGGAGAGAGACGCGGAGAACTGGCGCGAGGAGAAGGCCCGGT
GGGAGTTGGAAATGGCGCGCGCCAGAGAGATGGAGAAGGAGGCTTACGAG
CGGTGCGAGACGGCGGAGCAGGAGAAGGCTAGCTTGGGCAAAAGCGTGGA
GGCGTTGGAAGCAGAGGTGGAGGAACTAAAGTCGGTGAACGTCCGATTGG
TGGGGCATGCCAACAGCCGGCAGAAGATCCAACTGCACAGCAAGCTGAAG
GAGGAGCTCACGGAGTTGAGTCGTAAATATAAGATGCTCGAGGAAGAGAA
CTATTCGTTGAAGGTGATGATGGGCCCAACGGAAGGGGAGAATGGAGATA
CGAAGGGCGGCAGCCTAAGCCTACGGAGGAAAGGAAAGTCGACGCCGGCT
GCTCCAATGGACGCCGCGGAGCCAGCCGCCCTGAGCAACGTGACGAATAC
GAGCGGTAGGCGCCCGACCCGGCGGACGGTAACGAAGAAGAAGGGCATGG
GCCTGGAGGCCTTGGCGGCGGAGGGACCTGAGGCGACGGAGACGTGA back to topprotein sequence of rna6488 >rna6488-protein ID=rna6488-protein|Name=rna6488|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MVLRRPEKEAGGSHHPLARFMGSSSSALFELVIFQPLDTCCKRIITHQGR
LLTAEGLSLTAKYGKIRSVVFREKLHSGPIDKLRSLYAGLKFGAYYKICQ
RTAAYGLQPFVFDYIHAYHHEGFVSLIGSKRARALEFATAAAVMGTAEVI
FIPLDTLKILSQTNPASLRSRSFLQLVRQEGFRLYRGASWTVLRNFPGSF
ALFGGSALVKEKVFHLDQYKDATLLQELLASCTGAVWSLTLSSPADVIKA
RVQRACLSPSHEGIQTKGREILREMLKKEGPWALFKGLNTKFMVVCPKLV
LSFTVYNQVMSWLDAVLEARGQ back to topmRNA from alignment at CM002468.1:622688..624397- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6488 ID=rna6488|Name=rna6488|organism=Nannochloropsis gaditana|type=mRNA|length=1710bp|location=Sequence derived from alignment at CM002468.1:622688..624397- (Nannochloropsis gaditana)
AGAAAGGATTGAGACGGGGTGAGAATTTGCCGCCGAGACCAAAGATCGAC
CATACCGGCGAGCTCTTATTTACTAATGCATAAGTCACAACGGACAATTG
AAAGGGCTCATCACGGAGCTAGAGCAACGACAGGAGGTCATTTTACTGCA
CATTCATCGTTTGAAAGGCTTGTCCGACGTATAAGGATCCATCAAATGAT
AATTTGCCCTGGGAATCTCGGTCTCGCCTACCCCCCTTAGCGCGTAACCT
AATACTTTTGACACTTTTGTACAGGCATTCATCGACGACAATTAATTATT
GCACAACGTGAAATATTAAGAAATTTGAGTGTCCTTCTGATTTACGGGGT
TCTACCGTGGTATAGGTCCCGTGATCTTCTAATTGGGGCAGCCACATGGT
CCTCCGCAGGCCTGAGAAAGAGGCTGGAGGGAGTCACCACCCTCTGGCCC
GTTTCATGGGTTCGAGTAGCAGCGCGCTCTTTGAGCTTGTCATCTTTCAG
CCTCTGGATACATGCTGTAAACGGATCATTACTCATCAGGGCCGGCTTTT
GACAGCAGAAGGCTTGTCTCTGACAGCCAAGTACGGGAAAATTCGAAGCG
TCGTTTTTCGAGAAAAGCTCCATTCCGGCCCCATCGATAAGCTCCGCTCC
TTGTACGCAGGCCTCAAATTCGGCGCCTATTACAAAATTTGCCAGCGTAC
CGCGGCCTACGGATTACAGCCCTTCGTTTTCGATTACATCCACGCCTACC
ACCACGAGGGCTTCGTCTCGCTGATCGGAAGCAAGAGGGCGCGAGCCTTG
GAATTCGCCACTGCCGCTGCCGTCATGGGCACGGCGGAAGTCATCTTCAT
CCCCCTGGACACTCTTAAAATCCTTAGCCAAACCAATCCTGCTTCCCTTC
GGAGCCGTTCTTTCCTCCAGCTTGTGCGTCAGGAAGGCTTTCGCCTCTAC
CGGGGGGCTTCTTGGACCGTGCTTCGGAATTTTCCTGGCTCTTTCGCCCT
GTTTGGGGGCTCAGCCCTCGTCAAGGAGAAAGTCTTCCACCTTGATCAAT
ACAAGGACGCTACCCTGCTTCAGGAACTCCTGGCTAGCTGCACGGGAGCG
GTATGGTCCCTGACCCTGTCCTCGCCCGCCGACGTCATCAAAGCCCGCGT
CCAGAGGGCCTGTTTATCGCCCAGCCACGAAGGGATTCAGACGAAGGGAA
GAGAGATCTTGAGGGAGATGCTCAAGAAGGAGGGCCCCTGGGCGTTGTTT
AAAGGCTTGAATACGAAATTTATGGTGGTGTGCCCAAAGCTGGTGCTCTC
CTTCACGGTTTACAATCAGGTCATGAGCTGGTTGGACGCGGTCCTTGAGG
CCAGGGGGCAATGAATGGTAACGCCAGTGCGTTGGAAAAGTGACGACGGA
CAAAAGCCTCGTCCCATGCTTCCCACAGGAGACGATGGCGCGGTGGCAGG
ACCACTGGTCGGCCCCGAGGGCTTAATGGAGGGGGGGGAAGATGAGCTCA
CGAAGGGCCGAGCGGCTCTATTTGACTGAACGATCGACCGCAGTGCGGTC
TGTAAAAATCTCTTGACGGTATCGACAGAAACATGTCAACAAGTAGGGGA
GGGGCCGACGATAGAGTCGCGGAAACGACCAGACGCAGACTCTTTGCATC
GCAAAGCTGAAATTCTTTTGTGTAAAATCAGTGCTCGGATAAATTGTGAT
TAGAGGCTAT back to topCoding sequence (CDS) from alignment at CM002468.1:622688..624397- >rna6488 ID=rna6488|Name=rna6488|organism=Nannochloropsis gaditana|type=CDS|length=969bp|location=Sequence derived from alignment at CM002468.1:622688..624397- (Nannochloropsis gaditana)
ATGGTCCTCCGCAGGCCTGAGAAAGAGGCTGGAGGGAGTCACCACCCTCT
GGCCCGTTTCATGGGTTCGAGTAGCAGCGCGCTCTTTGAGCTTGTCATCT
TTCAGCCTCTGGATACATGCTGTAAACGGATCATTACTCATCAGGGCCGG
CTTTTGACAGCAGAAGGCTTGTCTCTGACAGCCAAGTACGGGAAAATTCG
AAGCGTCGTTTTTCGAGAAAAGCTCCATTCCGGCCCCATCGATAAGCTCC
GCTCCTTGTACGCAGGCCTCAAATTCGGCGCCTATTACAAAATTTGCCAG
CGTACCGCGGCCTACGGATTACAGCCCTTCGTTTTCGATTACATCCACGC
CTACCACCACGAGGGCTTCGTCTCGCTGATCGGAAGCAAGAGGGCGCGAG
CCTTGGAATTCGCCACTGCCGCTGCCGTCATGGGCACGGCGGAAGTCATC
TTCATCCCCCTGGACACTCTTAAAATCCTTAGCCAAACCAATCCTGCTTC
CCTTCGGAGCCGTTCTTTCCTCCAGCTTGTGCGTCAGGAAGGCTTTCGCC
TCTACCGGGGGGCTTCTTGGACCGTGCTTCGGAATTTTCCTGGCTCTTTC
GCCCTGTTTGGGGGCTCAGCCCTCGTCAAGGAGAAAGTCTTCCACCTTGA
TCAATACAAGGACGCTACCCTGCTTCAGGAACTCCTGGCTAGCTGCACGG
GAGCGGTATGGTCCCTGACCCTGTCCTCGCCCGCCGACGTCATCAAAGCC
CGCGTCCAGAGGGCCTGTTTATCGCCCAGCCACGAAGGGATTCAGACGAA
GGGAAGAGAGATCTTGAGGGAGATGCTCAAGAAGGAGGGCCCCTGGGCGT
TGTTTAAAGGCTTGAATACGAAATTTATGGTGGTGTGCCCAAAGCTGGTG
CTCTCCTTCACGGTTTACAATCAGGTCATGAGCTGGTTGGACGCGGTCCT
TGAGGCCAGGGGGCAATGA back to top
|