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Properties
| Property Name | Value |
|---|
| Product | Transcriptional regulator TACO1-like protein |
| Orig transcript id | gnl|cribi|Naga_100020g8.5375.mrna |
| Orig protein id | gnl|cribi|Naga_100020g8.5375 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:578694..579936 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6469 ID=rna6469|Name=rna6469|organism=Nannochloropsis gaditana|type=mRNA|length=1984bp
CATGGACTTACGGACCGTGAACATCATGGCCGGATACCTAGCGCGGACGA
AGGGCTTCGACGAGGCCCAGGCGATGGTAGAAGACGTGAGAAGGGGGGCC
CCGGGGATCGAACCGAGGGCGGTCACGCACAACATCCTTCTCGACGCGCT
GCTGAAGGCGAGACGGGTGGAGGAGGCCCTGGAGTACTTCTATGCCGTGG
CCGCAGAGGCCTCGTCTGCTGGCCCTGGGCCTGACAAGAGCGCACGGAGA
GGGAGCAGGGGGGAGAGAGGGCGCCAAGGCGGGGGCTGGAGGAAGGAGCG
GGAGAAGGAAGTCGCCTTGGTGGACAGCACCACCTACGACATCCTCCTGA
ACGGGCTCGTGCAAAACGGACGAGTCTCCACGGCCGGGGCAGTCCATACC
ATGATGCGCAAGGCTCAGTTTCCGCCCACCATGTACACCTACGCAGCCCT
CATCCGCCTGCAGAAGAGTGCCCTGGACGTGTACCGGCTGTGGGGCCAGG
CGCGCGCGGACTACCCACGGCTCAGCCTCCCTTTCCTCAACCTGTTGGTT
TACGAGCTCGGGCAGTCCCACAACGACTTGCCGGGGGCCCTGGCCGCCTT
TCGCGCCATTCTTCGGATGGGTCGTCAGCCCAACACCATTTCTTTCAACT
CTCTTTTCTCCGCTCTTATGAAGGACGCCAATGCCTGCCTTCCCAGATGG
ACCCCCCCTCTTGAGGAAGGGGGGGAGGAGGGGCCGGACAAGACCGGGGA
GCGACTGTCCCACGGGCAGGGATATCTTTTGGAAGACGAGTATCCTGCTG
TGTCGGCTCTCTCGAGCGAGGGTCGCGGGCTGATATCCCTTCTCGAGTCT
CTGCAGGATAGGACCCTTCTGGAAGCCTCCTTGGTTGTGCTTCGGAGCAT
GTACCATGAGGGGAAAAGACCCTCAAGCTCGAAGGAGACCAGAGAGGGTT
CCGAGACAGGCAACGAGAATATGCTTCAAGGGTATGAGCTTGGGCAGGGA
CGCGCATCCTCCCCCCCCTCCGTGACCGCTTCAGCGCGTCCCAACGCCCG
GACCTTCACCATCCTGATGGCCGGCATCAACCGGGCGGACCTGGGGCCTC
GAGGGACTGCTCTTTGCATTGCCCTGTACCACGAAGCCCAAGAAGATGGT
GTGTCCCCGAACGGTATCATGTGCCATGCTTTGCTCCGCTCATTCGGGCC
GGACGCGAAAGGGGCCCTGGGTTTCTTCAAGCGGGAACTCCGGGTCTCTC
TGAAGGCACTGGATGCGGTCGACCGCGCGGAGGAGGCAGCGAGAGGATTG
GAAGACGAGACAGAGGATGGACGAGAAATCGACGGGGTCTTTACGTCCGG
TGGGAATCTGTCGCTGGCTTACATGGCCTTGCTCTACATCTGTGGGGTCT
CCGGGCGTTCCGATTTGGCCCTGCAGTTGCTCTATGCTATGCAGCGGGAC
GGACTGCCCACTGATCAAAATGTTTGGGAGGCTTTTGAGGCGGGCAAAAC
CGCTCCTGGCGCTGCCGCTACTGCCACGTCGTCCATGGGCCAGTTGTGGA
TGGGCCCCTACGAGTCTCTGCTGCGGACAGAGACTATTGGCTTGGGATGG
GAAACGGGTGTGAGGCGAGTGCGAATAAAATTCTGAGGACCTTACCGGCA
GTGTACACAACAGAAATTGAAAGGCAAAATGCTCCTGCTAACCAATCCGT
TTTTGCAATATCTGCAGCTTGTAATATAAAGGAACAATAACTTTTTAAAT
ATAAAGGAAAAGAGATTGTCAGGTTTTAACCTCCTCCCATTTGGGCCTGC
CCACCGCATTACCGTGAGGAAACCAGGAGCGAGATTCGTGTCAGTATCCG
AAGATTTTTCTCCCGCAGATGCCAATAGCGTCTAAAGGAGCCATCTGATG
GGGTACATTTAAGATAACTTGTGTCGGTGCCCACTTTATTGACCACCAAC
CGCTAGCTTTCTATCCGGGCAGCTCTCGCTCAGG back to topprotein sequence of rna6469 >rna6469-protein ID=rna6469-protein|Name=rna6469|organism=Nannochloropsis gaditana|type=polypeptide|length=317bp
MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMS
GNVCLPLRQPQPRCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKK
LVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADY
KEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAF
NFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPAS
VSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDD
VDSVEHNVAMDEGEEGA back to topmRNA from alignment at CM002468.1:578694..579936+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6469 ID=rna6469|Name=rna6469|organism=Nannochloropsis gaditana|type=mRNA|length=1243bp|location=Sequence derived from alignment at CM002468.1:578694..579936+ (Nannochloropsis gaditana)
ATGACGACAACCAGGGTCATGGTATATATGGGATGCATGTTTGTAGTATT
CATCATTTCTTTGAGCCCTGGGCAAGCATTTTTCTTGCCATCCTGCCGAC
CGCCTGAGGCTGCAACTTCAGCTCCAGGGATACTAGCGGACACGATGAGC
GGCAATGTGTGTCTACCTCTGCGACAGCCGCAACCGAGATGCAATCGAAT
AAACAGGTACGTTTTTGAAAAGTCTTAAGGCAGCTTTGAACCTGATTTTG
AGTGGGAAACTATTTCCTGGTAGATGGAAATCGTAGTCGCGGACATGGCT
CAGGCCAATGCACGTGTATTAGACAGCAATCACCCAAAGGTGTATCTTGT
AGTCCCTCCAATCTTGTGAAAGTATAATGTTGctgggggagtggaggaat
ggaggaggaaatgtaGTCCCTGCCGTGACCGTTTTCCTAACGCCCCTTTC
TCGCCTAGTCACCCGCTGCTTGCATCGTGCCCACTCCCCCTTTAGGCTCT
TCATGGGCCGTCGCGCAGCTAAGAACGCCGCTCGTAAAGGGAAATCGGAC
GCTCTGAAAACGAAGGTCTATGCCACGTACGGAAAGAAACTGGTGATGGC
CGTGAAAGCAGGAGGGCCCGACCCGGAGGTGAACCGGGCGTTGGCAGTCA
TGATCcgggaggccaaggcccagGGCGTGCCCAGCGACAACGTCCAGCGC
GCCATCCAGCGAGGGAGCAACGCCAATGAAGCGGATTATAAAGAGGCGGT
GTACGAGGCGTACGGGTACGGGGGCGCGGGCCTGATCATCAACTGCTTGA
CAGATAACACGAACCGGGCTAAGACTGAGATCAGCAACGTCATCAAGAAG
ACCGACGTAAAACTGGCGACGTCAGGATCGGTGGCCTTCAATTTCGACAG
AAAGGGTCGCATCGATTTGGCGGGGattgtggaggaagacgccgtcttgg
aggcggcgctggaggccgacgtggaggacgtggacacGCGcgtgaacgag
gaggagggcgtcaCGAGCGTGCTGGTGGACCCGGCCAGTGTGAGTAGCCT
GAGGGAGGTCTtcctggggaaggggagggagatcaaGGCCTCGTTGATGG
TGAACGTGCCCAAGCTCCTGATGGACTGTTCGGACGAGGACTTCGAGGGG
AACATGAGCGTGATCGAGGCGCTGGAAGAGCTGGATGATGTGGACAGTGT
CGAGCACAACGTGGccatggacgagggagaagaaggcgcatGA back to topCoding sequence (CDS) from alignment at CM002468.1:578694..579936+ >rna6469 ID=rna6469|Name=rna6469|organism=Nannochloropsis gaditana|type=CDS|length=1908bp|location=Sequence derived from alignment at CM002468.1:578694..579936+ (Nannochloropsis gaditana)
ATGACGACAACCAGGGTCATGGTATATATGGGATGCATGTTTGTAGTATT
CATCATTTCTTTGAGCCCTGGGCAAGCATTTTTCTTGCCATCCTGCCGAC
CGCCTGAGGCTGCAACTTCAGCTCCAGGGATACTAGCGGACACGATGAGC
GGCAATGTGTGTCTACCTCTGCGACAGCCGCAACCGAGATGCAATCGAAT
AAACAGGCTCTTCATGGGCCGTCGCGCAGCTAAGAACGCCGCTCGTAAAG
GGAAATCGGACGCTCTGAAAACGAAGGTCTATGCCACGTACGGAAAGAAA
CTGGTGATGGCCGTGAAAGCAGGAGGGCCCGACCCGGAGGTGAACCGGGC
GTTGGCAGTCATGATCcgggaggccaaggcccagGGCGTGCCCAGCGACA
ACGTCCAGCGCGCCATCCAGCGAGGGAGCAACGCCAATGAAGCGGATTAT
AAAGAGGCGGTGTACGAGGCGTACGGGTACGGGGGCGCGGGCCTGATCAT
CAACTGCTTGACAGATAACACGAACCGGGCTAAGACTGAGATCAGCAACG
TCATCAAGAAGACCGACGTAAAACTGGCGACGTCAGGATCGGTGGCCTTC
AATTTCGACAGAAAGGGTCGCATCGATTTGGCGGGGattgtggaggaaga
cgccgtcttggaggcggcgctggaggccgacgtggaggacgtggacacGC
GcgtgaacgaggaggagggcgtcaCGAGCGTGCTGGTGGACCCGGCCAGT
GTGAGTAGCCTGAGGGAGGTCTtcctggggaaggggagggagatcaaGGC
CTCGTTGATGGTGAACGTGCCCAAGCTCCTGATGGACTGTTCGGACGAGG
ACTTCGAGGGGAACATGAGCGTGATCGAGGCGCTGGAAGAGCTGGATGAT
GTGGACAGTGTCGAGCACAACGTGGccatggacgagggagaagaaggcgc
atGAATGACGACAACCAGGGTCATGGTATATATGGGATGCATGTTTGTAG
TATTCATCATTTCTTTGAGCCCTGGGCAAGCATTTTTCTTGCCATCCTGC
CGACCGCCTGAGGCTGCAACTTCAGCTCCAGGGATACTAGCGGACACGAT
GAGCGGCAATGTGTGTCTACCTCTGCGACAGCCGCAACCGAGATGCAATC
GAATAAACAGGCTCTTCATGGGCCGTCGCGCAGCTAAGAACGCCGCTCGT
AAAGGGAAATCGGACGCTCTGAAAACGAAGGTCTATGCCACGTACGGAAA
GAAACTGGTGATGGCCGTGAAAGCAGGAGGGCCCGACCCGGAGGTGAACC
GGGCGTTGGCAGTCATGATCcgggaggccaaggcccagGGCGTGCCCAGC
GACAACGTCCAGCGCGCCATCCAGCGAGGGAGCAACGCCAATGAAGCGGA
TTATAAAGAGGCGGTGTACGAGGCGTACGGGTACGGGGGCGCGGGCCTGA
TCATCAACTGCTTGACAGATAACACGAACCGGGCTAAGACTGAGATCAGC
AACGTCATCAAGAAGACCGACGTAAAACTGGCGACGTCAGGATCGGTGGC
CTTCAATTTCGACAGAAAGGGTCGCATCGATTTGGCGGGGattgtggagg
aagacgccgtcttggaggcggcgctggaggccgacgtggaggacgtggac
acGCGcgtgaacgaggaggagggcgtcaCGAGCGTGCTGGTGGACCCGGC
CAGTGTGAGTAGCCTGAGGGAGGTCTtcctggggaaggggagggagatca
aGGCCTCGTTGATGGTGAACGTGCCCAAGCTCCTGATGGACTGTTCGGAC
GAGGACTTCGAGGGGAACATGAGCGTGATCGAGGCGCTGGAAGAGCTGGA
TGATGTGGACAGTGTCGAGCACAACGTGGccatggacgagggagaagaag
gcgcatGA back to top
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