EWM24242.1, cds6453 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|585105633|gb|EWM24242.1| (Transcriptional regulator TACO1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 Query: 1 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA 317 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA Sbjct: 1 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA 317
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|553179512|ref|XP_005852712.1| (hypothetical protein NGA_0690700 [Nannochloropsis gaditana CCMP526] >gi|422295822|gb|EKU23121.1| hypothetical protein NGA_0690700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0 Identity = 316/317 (99.68%), Postives = 317/317 (100.00%), Query Frame = 0 Query: 1 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA 317 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNR+NRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA Sbjct: 1 MTTTRVMVYMGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQPRCNRLNRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEGA 317
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|219121619|ref|XP_002181160.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407146|gb|EEC47083.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 234.958 bits (598), Expect = 2.895e-73 Identity = 125/240 (52.08%), Postives = 165/240 (68.75%), Query Frame = 0 Query: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGG-PDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASL-MVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 MGR AA AA K K+DA K K A YGKKL+MAVK GG PDP+ N+ALA +I+ AKA VP DN+ RAI++ S N D+KEA +EAYG+GG LIIN LTDN NRA +++ + K D K+A SGSV F +DRKG I++ ++E+AVLEAA+EA +D + + EG T + DP+ VS + E G + A + + V K ++CSDEDF+ NM +IEALE+LDDVDSVEHN++ Sbjct: 1 MGRAAAVRAATKNKTDAKKAKTNAVYGKKLIMAVKQGGSPDPKANKALADVIKGAKANSVPVDNINRAIKKASEGNVGDFKEATFEAYGFGGVSLIINVLTDNNNRATSDVRTAVNKRDGKIAESGSVLFMYDRKGMIEVQQDLDEEAVLEAAIEAGCDDYELSAGDVEGTTILYTDPSEVSMMFEALKSLGCDAGAKMSLTYVTKAPVECSDEDFDKNMDIIEALEDLDDVDSVEHNMS 240
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|1210520990|dbj|GAX20223.1| (hypothetical protein FisN_12Hh070 [Fistulifera solaris]) HSP 1 Score: 232.646 bits (592), Expect = 1.960e-72 Identity = 119/240 (49.58%), Postives = 168/240 (70.00%), Query Frame = 0 Query: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGG-PDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASL-MVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 MGR AA A+ K K+D K K A +GKK++MAVK GG PDP NRALA ++++AKAQ VP DN+QRAI++ S N D+KE+++EAYG+GGA L+I+ LTDN NRA ++ + + K + K+A +GSV F +DRKG + + ++EE+AVLEAA+EA D++ V EEG T V DP+ S++ + G E + ++ V K ++CSDE+FE NM +I+ALEELDDVD VEHN++ Sbjct: 1 MGRAAAVRASTKAKTDLRKAKTNAIFGKKIIMAVKQGGSPDPNANRALADVMKQAKAQSVPVDNIQRAIKKASEGNVGDFKESIFEAYGFGGASLVIHVLTDNNNRATADVRSTVSKREGKMAEAGSVLFMYDRKGCVQVPAVLEEEAVLEAAIEAGCSDMELVV--EEGTTRVYTDPSETSNMFQAIQSMGYEQGLEMSLIYVSKAPVECSDEEFEKNMEIIDALEELDDVDRVEHNMS 238
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|1210519777|dbj|GAX21366.1| (hypothetical protein FisN_12Lh070 [Fistulifera solaris]) HSP 1 Score: 233.417 bits (594), Expect = 4.028e-72 Identity = 119/240 (49.58%), Postives = 168/240 (70.00%), Query Frame = 0 Query: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGG-PDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASL-MVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 MGR AA A+ K K+D K K A +GKK++MAVK GG PDP NRALA ++++AKAQ VP DN+QRAI++ S N D+KE+++EAYG+GGA L+I+ LTDN NRA ++ + + K + K+A +GSV F +DRKG + + ++EE+AVLEAA+EA D++ V EEG T V DP+ S++ + G E + ++ V K ++CSDE+FE NM +I+ALEELDDVD VEHN++ Sbjct: 40 MGRAAAVRASTKAKTDLRKAKTNAIFGKKIIMAVKQGGSPDPNANRALADVMKQAKAQSVPVDNIQRAIKKASEGNVGDFKESIFEAYGFGGASLVIHVLTDNNNRATADVRSTVSKREGKMAEAGSVLFLYDRKGCVQVPAVLEEEAVLEAAIEAGCSDMELVV--EEGTTRVYTDPSETSNMFQAIQSMGYEQGLEMSLIYVSKAPVECSDEEFEKNMEIIDALEELDDVDRVEHNMS 277
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|397631373|gb|EJK70127.1| (hypothetical protein THAOC_08541 [Thalassiosira oceanica]) HSP 1 Score: 224.172 bits (570), Expect = 4.239e-68 Identity = 118/246 (47.97%), Postives = 168/246 (68.29%), Query Frame = 0 Query: 66 RINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGG-PDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASL-MVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 R++ L MGR AA AA KGK+DA K KV A YGKK++MAVK GG PDP NR LA +I+ AK VP DN+ RAI+R + + D+ E+ +EAYG+GGA LIIN L+DN NR+ ++ + + K + KLA SGSV F +D KG++++ V+E+ +L AA++A V+D++ +EEG + V DP S L + G E + + + +V K ++CS+EDFE NM +I+ALE+LDDVDSVEHN++ Sbjct: 62 RVSPLLMGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSPDPVANRQLAELIKAAKNNSVPVDNINRAIKRATEKDAGDFSESKFEAYGFGGASLIINVLSDNPNRSTADVKSAVNKNNGKLAESGSVLFMYDLKGKVEIPCEVDEEELLMAAIDAGVDDMELVDGDEEGTSIVYTDPKETSLLFDAVKSMGLEEGSKMSLSHVSKAPVECSEEDFEKNMKIIDALEDLDDVDSVEHNMS 307
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|224003587|ref|XP_002291465.1| (hypothetical protein THAPSDRAFT_34698 [Thalassiosira pseudonana CCMP1335] >gi|220973241|gb|EED91572.1| hypothetical protein THAPSDRAFT_34698 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 219.935 bits (559), Expect = 2.580e-67 Identity = 113/240 (47.08%), Postives = 163/240 (67.92%), Query Frame = 0 Query: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGP-DPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASL-MVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 MGR AA AA KGK+DA K KV A YGKK++MAVK GG DP NR L +I+ AK VP DN+ RAI+R + + D+ EA +EAYG+GGA LIIN L+DN+NR+ ++ + K K+A GSV F +D KG+I++ +V+E+ +L AA++A VED++ +EEG + V DP S++ + G E + + + ++ K ++C++EDF+ NM++IEALEELDDVDSVEHN++ Sbjct: 1 MGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSADPIANRQLGELIKAAKQNSVPVDNINRAIKRATEKDAGDFSEATFEAYGFGGASLIINVLSDNSNRSTADVKTAVNKLKGKMAEQGSVLFMYDLKGKIEIPAVVDEEELLMAAIDAGVEDMELVEGDEEGTSIVYTDPKETSAMFDAVKAIGLEEGSKMGLAHISKAPVECTEEDFDKNMAIIEALEELDDVDSVEHNMS 240
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|299117471|emb|CBN73974.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 219.55 bits (558), Expect = 2.767e-66 Identity = 125/310 (40.32%), Postives = 182/310 (58.71%), Query Frame = 0 Query: 10 MGCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQP----------RCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 +GC +F +LS AF P+ A+ GI T G R QP R + + MGRRAAK A KG+ DA + K +A GKK++MAVKAGGP+ + N+ LA I+EAK VP DN+ RAI+R + ++ D+KE +YEAYG+GG G+++ LTDN NRA ++ V KK +K A GSV F F+++GR+++ G V+E+ V+EAA+EA V+DV+ + EG + +L P + +L G + L + +P L D DE E N++ +EAL EL+DVD+V+HN+A Sbjct: 9 LGC--ALFAAALSGISAFIAPT------ASQLQGI---TALGRRHHDGRSHQPTQQQQQQRAGRGSAAGVVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTIKEAKHNSVPKDNIARAIKRAVDGSQGDFKEVIYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKQGLKQAAQGSVLFQFEKRGRVEVQGEVDEEQVIEAAIEAGVDDVEVVEGDHEGTSWILTTPKDLMTLTGALSEAGITGETGLAL-IPSGLADVDDEAMELNLAAVEALLELEDVDTVDHNMA 306
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|873238252|emb|CEL95960.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 199.904 bits (507), Expect = 2.246e-59 Identity = 115/256 (44.92%), Postives = 162/256 (63.28%), Query Frame = 0 Query: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRI----DLAGIVEEDAVLEAALEADVEDVDTRV--------NEEEGVTS-----VLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAM 310 MGRRAAK A +K K +A K+K+Y+ YGKK+ A+K GG DP N LA +I+EAKA GVP DN+ R +++ +A DY E +YE YG+GG G+++ CLTDNTNRA + + +KK K A+ GSV+F F + +I D A ++ED V E ALE+ V+D+D R N E+G T VL P S+ +LR+ G E SL ++P L+DCS+E+ E N+ +I+ALE++DDVD VEHN++ Sbjct: 1 MGRRAAKVAEKKAKGEAAKSKIYSRYGKKIAGAIKTGGSDPLNNMELASLIKEAKAAGVPKDNIDRLLKKADDA--PDYTEVIYEVYGHGGVGMLVTCLTDNTNRAASVVKAAVKKAGGKDASPGSVSFQFTKMAKIEIPEDRAADLDEDKVFEIALESSVDDIDIRPAPLRPDIENNEDGSTPVPPKWVLTTPNSLKALRDALEANGIEGSTSL-AHIPNALVDCSEEELEKNLGLIDALEDIDDVDMVEHNISF 253
BLAST of EWM24242.1 vs. NCBI_GenBank
Match: gi|551572145|ref|XP_005771919.1| (hypothetical protein EMIHUDRAFT_65618 [Emiliania huxleyi CCMP1516] >gi|485623277|gb|EOD19490.1| hypothetical protein EMIHUDRAFT_65618 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 189.119 bits (479), Expect = 3.129e-55 Identity = 108/246 (43.90%), Postives = 150/246 (60.98%), Query Frame = 0 Query: 71 FMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEAD------VEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAM 310 MGR+ N + K+ K + GKK+V+AVKAGG DP +NR LA ++ EA A VP D V + I+R + + A+Y E YEAYG+GG GL+INCL+DN NRA +E++ VI K K+A+ GSV FNF KGR+ +A ++ED++L+ A+EA +E D + E VL + A + +++ G G + L VNVP + S ED E N VI+ LEELDDVDSVEHN+A+ Sbjct: 1 MMGRKFENNKLKMAKTALAYAKKASYIGKKVVVAVKAGGDDPSINRQLAAVMAEANALNVPKDVVTKNIKRAMDTDTANYDELTYEAYGHGGVGLVINCLSDNKNRAVSEVNMVINKNGCKVASQGSVLFNFSPKGRLVVAKPLDEDSLLDIAIEAGCDGDVLLEPPDAEADGEAARAVVLTEAAELGAVQGALQGAGYDCSGKL-VNVPLAPQEVSAEDEEANFGVIDKLEELDDVDSVEHNMAL 245 The following BLAST results are available for this feature:
BLAST of EWM24242.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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