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Properties
Property Name | Value |
Product | Membrane transporter, Tim44-related/Ribosomal protein L45 |
Orig transcript id | gnl|cribi|Naga_100020g12.5366.mrna |
Orig protein id | gnl|cribi|Naga_100020g12.5366 |
Gene | TIM44 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002468.1 | supercontig | CM002468.1:568597..570756 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6465 ID=rna6465|Name=rna6465|organism=Nannochloropsis gaditana|type=mRNA|length=1551bp CTGAGGACCACAGATCATGCATGCACACGGGTAGCAAGTAATGCTTTACT TCTCTTTTGGTAATATGTAGTACATTTCCTTCAAACTAGCGTCGAAACCA TCAGCCGCAGACGGAAATCATGCTGACAGAGCGTCAAAAGGCAGACCTGC ATGTGGCTATCTTGGAGTACCTTCGAGACGAAGGGGACAGTCTCGCGAAG ACAGCCGAGCTATTCGCCCTGGAGACCGGCCTGGAAGCAGCAGCAGTCCC TAAATTGACAGGAACCTTGGAAAAAAAATGGTCCGCGGTCGTGCGTTTGC AGAAAAAATTGATGGAGTTGGAAGAGCGTATGTTGGTCGCTGAGCAAGAA TTAAAAGCATACCGCGGACACTCACACATGGGAGGCACTCGGGCACCAGC TGCGGGCGACGACCGCAATCTCCCCCGCGCCCCCGCCATACGCTCCTTCC TGGGCCATCGAGGGGGGGTGACGTGCTTGGCAATGCACCCGATCTTTGCC TTACTGGTCTCGGGGAGTGATGATGCAACGATCAAGACATGGGATTTGGA GAGCGGGGCGCACGAACTGACCCTGAAAGGGCACACCAATGGTGTCCAGG CTGTGGTCTTCAACCGAGCGGGCACGCTACTAGCGTCCTGCTCTAGCGAT CTCAGCATAAAACTGTGGAATTTCCAGTCCCCGAGCACCGCGCCCGAGTG CGTACGGACACTACGGGGCCACGACCACACCATCTCGGGCCTGGCTTTTA TTGGGCCAACGGACGCTCAGCTTGCCTCCTGCTCGAGAGACACCACAGTG AGGCTGTGGGAGGTGAGCACGGGATTCTGCCAAAGGTCTTTAGTCGGCGC GCACACCGATTGGGTACGCTGCATTGCCACAAGCGCGGACGGGGCGCTTC TAGCCAGCGGGGGAAGTGACCGGCTGGTGGCGGTCTGGGCCTTGGACACG TGCGCCCCCGTCGCCGTCCTTAGGGAGCATTCCCACGTGGTGGAGGCTGT GGCCTTCCCGCCCCCTGGGGTCGCGGTGAAAATCGATGGCAACAAGGGGG GCAGCACCGGCCTAGGGTCTGAGAATGGTGAGGCAAGCGCCGGCCTCCAG AGTCAGGGATCGGCCGAGGAGGCCTACCTGGTCTCGGGCAGCCGCGACAA GACAATCATGCTCTGGAATGCGAGGACGGGGCAGTGTCTGTTGAGACTCG CAGACCACGAGAACTGGGTTCGTTCCGTCCGCTTCCACCCGTCGGGGCAG TTTCTGTTAAGCGTCTCGGACGACAGGAGCCTGCGCGTGTTCGACATTGC CAAGGCGCGCTGCATCCGCTCCCTCCCCGACGCCCACGAGCAATTCGTTT CGGCCCTGGCGCAGCACCCGACCTTGCCCTACCTGGCCACCGGCAGCGTC AATCGTGAAATCAAGCTGTGGGAGTGTCGGTAGCTTTCGCCAGGCTCGCC TAGATCGAGGAGCCTATGTACAGAGGGGCAATGTGAGGCTCTTAAAGCAA GCACACGGAGGCGTCTCACAAATGCAGTAAAATAACAACGCAATACGTTC G back to topprotein sequence of rna6465 >rna6465-protein ID=rna6465-protein|Name=rna6465|organism=Nannochloropsis gaditana|type=polypeptide|length=582bp MLRQGLTKLRHSHHAGKRVQQVQEKYKGQVTSTLLSHQKGGTWEGIHASR GGCRAMSGGFFDQLRQSLKKEVEQNKEFKESLSKLRKETGDLTGKAQENS SKLAESMHKLSSTVSSRLNETRESLSKNSQVLMLQLKEKVGASQAEESEK KGEGARRDSPSPVKSHAEVSHKESPTSSKSASSHADGHHESPAREGGRRR TLEEASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGS GASGGKENVFTRWLAGRPPRESVRVFVRDFQVGLREAFADLFGMREKSTG MRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQK TWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLS ESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVL EISNAEIVQAKLHDHQPVLVLGTLIQHINCVRNREGAIVEGKEDEVRASF YLLLFVREYDEKEGALQWKIQERYLGFSQPFI back to topmRNA from alignment at CM002468.1:568597..570756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6465 ID=rna6465|Name=rna6465|organism=Nannochloropsis gaditana|type=mRNA|length=2160bp|location=Sequence derived from alignment at CM002468.1:568597..570756- (Nannochloropsis gaditana) AAAGAATTTTTCCTCGTTCGCCGGCTTCCTAGCCTCTCCATTACACTCGC
CCTCCCACAAGTCCTGGGATGGCCACGAGAGAAGCGTCAGGGAACGGTAG
ACGCTTGAAAAGCTTTTTGTGTCTCATATAGATGTGTTCACTTCTACACA
TCCCCTCCCACTCGCCGTAGAAGCTGACGGAGTGGAAGACACAGAGAGGT
GGTGTGCTGTGTAGCCGGGAGGTGAGGGATGCTGCGGCAGGGCTTGACCA
AGTTGCGGCACTCTCATCATGCCGGTAAGCAAAGTTAAGGCCGGTATTAT
GTACCTTCACACCAAATATATTTATCCCTGGTTGTGACCATATCATTGCG
CCTCAGGTAAGAGAGTACAGCAGGTTCAGGAAAAGTACAAGGGGCAGGTG
ACGTCAACGCTCCTGTCGCATCAAAAAGGAGGCACTTGGGAAGGTATTCA
TGCGTCTAGAGGAGGGTGCCGGGCGATGAGTGGTGGATTTTTCGACCAAC
TTCGACAATCACTTAAGAAGGAGGTGGAACAGAATAAAGAGTTCAAGGAA
AGCCTGTCAAAGCTAAGGAAGGAGACGGGAGACTTGACGGGAAAAGCTCA
GGAGAACTCCTCCAAGTTGGCGGAAAGCATGCACAAGTTGTCATCGACTG
TATCCAGCCGCCTGAATGAGACAAGAGAAAGTTTGAGCAAGAACTCCCAG
GTACTCATGTTGCAGTTAAAAGAGAAAGTAGGGGCATCGCAGGCGGAGGA
AAGCGAAAAGAAAGGTGAGGGGGCAAGGAGAGATTCCCCCTCTCCTGTCA
AGTCGCACGCGGAAGTCTCTCACAAGGAAAGCCCGACTTCCTCCAAGAGC
GCATCAAGTCATGCTGACGGTCATCATGAGTCGCCCGCACGGGAGGGAGG
ACGGAGAAGAACCCTCGAGGAGGCCAGCCAGGCCGCTGAAGAAGACCCTG
TGAAAGCGTCGGGCGCCGAGGACTCCGCAGGGCGCAAGGAAGAAGCATCA
AGGGACGAGACGGAGGCCTCATCCACCTCTTCCTCCAGTGGAGGGACGGG
TGCTGGCAGTGGTGCGTCTGGGGGGAAGGAGAATGTGTTTACAAGGTGGT
TGGCGGGACGCCCTCCTCGGGAGTCCGTCCGAGTCTTTGTTCGGGACTTC
CAGGTGGGCCTGAGGGAGGCGTTTGCGGACCTGTTTGGGATGCGGGAAAA
GAGCACCGGTATGAGGAAGCACATTTATCAACAAAGAGCTTCGGAAGCGG
ATGGGGAAGCCGGGAAGCAAGAGGGAGAGGAGGGGGAGAAGGGGGAGGCG
GGGGAGGAGAAAAAAAAGAACGCCGGGGGCGCCTTGGTGGTGGTGAAGCA
GCAACAGAAAACCTGGGAGCGGCTAGCTGAGCAATTGCGAGACGCGCCTA
TCATTCAAGAGATTTTAAAAGCGGGCACGAAGCTGGCGGACACAGAGCTC
GGTCGGCAGGCGGGAAAGCTGAGGGGCAAGCTCCAGGACCGGGTGGAAGA
CGCGCGGGAGCTGTGGGAGACGAGTCAGAACCCGATCGTGTACAAGCTCT
CCTCCATGTGGGACGACCTGACCTCGGAGACGGAGCTGGGCATTGCCTTG
CGGGAGATCCGGCGAGCGGACCCGGACTTCGTGGTGGAGGACTGGGTGAA
CACGCTGTCCGAGTCCTTCCTGCCCCTCTTCTTCAAGGCCTACCTGAAGG
GGGACCTGAAGACGCTCAAGCCCTACCTCTCGGAGGGGATGTACAGGCAG
ATGGCGGAGGAATTTCGTCTCCGCAAGGCCGAGGGCCTGGCGCTGGACCC
GCACGTGCTCGAGATCAGCAACGCCGAGATCGTACAGGCCAAGCTCCACG
ACCACCAGCCCGTCCTCGTCCTGGGGACGCTCATCCAGCACATCAACTGT
GTGCGGAATCGGGAAGGGGCGATCGTCGAGGGGAAGGAAGATGAGGTACG
AGCCTCCTTTTACCTGCTGCTGTTTGTGCGGGAGTACGACGAGAAGGAGG
GGGCTTTGCAGTGGAAGATCCAGGAGCGGTACCTGGGCTTCTCCCAGCCC
TTCATTTAGAGTGAGGAGGGGCGACAGAGCCATCGAGCCGCTTCGAAGCA
AAGTATGATTTGAGACGGTTGCGACGAACGTATTGCGTTGTTATTTTACT
GCATTTGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:568597..570756- >rna6465 ID=rna6465|Name=rna6465|organism=Nannochloropsis gaditana|type=CDS|length=3498bp|location=Sequence derived from alignment at CM002468.1:568597..570756- (Nannochloropsis gaditana) GTAAGAGAGTACAGCAGGTTCAGGAAAAGTACAAGGGGCAGGTGACGTCA ACGCTCCTGTCGCATCAAAAAGGAGGCACTTGGGAAGGTATTCATGCGTC TAGAGGAGGGTGCCGGGCGATGAGTGGTGGATTTTTCGACCAACTTCGAC AATCACTTAAGAAGGAGGTGGAACAGAATAAAGAGTTCAAGGAAAGCCTG TCAAAGCTAAGGAAGGAGACGGGAGACTTGACGGGAAAAGCTCAGGAGAA CTCCTCCAAGTTGGCGGAAAGCATGCACAAGTTGTCATCGACTGTATCCA GCCGCCTGAATGAGACAAGAGAAAGTTTGAGCAAGAACTCCCAGGTACTC ATGTTGCAGTTAAAAGAGAAAGTAGGGGCATCGCAGGCGGAGGAAAGCGA AAAGAAAGGTGAGGGGGCAAGGAGAGATTCCCCCTCTCCTGTCAAGTCGC ACGCGGAAGTCTCTCACAAGGAAAGCCCGACTTCCTCCAAGAGCGCATCA AGTCATGCTGACGGTCATCATGAGTCGCCCGCACGGGAGGGAGGACGGAG AAGAACCCTCGAGGAGGCCAGCCAGGCCGCTGAAGAAGACCCTGTGAAAG CGTCGGGCGCCGAGGACTCCGCAGGGCGCAAGGAAGAAGCATCAAGGGAC GAGACGGAGGCCTCATCCACCTCTTCCTCCAGTGGAGGGACGGGTGCTGG CAGTGGTGCGTCTGGGGGGAAGGAGAATGTGTTTACAAGGTGGTTGGCGG GACGCCCTCCTCGGGAGTCCGTCCGAGTCTTTGTTCGGGACTTCCAGGTG GGCCTGAGGGAGGCGTTTGCGGACCTGTTTGGGATGCGGGAAAAGAGCAC CGGTATGAGGAAGCACATTTATCAACAAAGAGCTTCGGAAGCGGATGGGG AAGCCGGGAAGCAAGAGGGAGAGGAGGGGGAGAAGGGGGAGGCGGGGGAG GAGAAAAAAAAGAACGCCGGGGGCGCCTTGGTGGTGGTGAAGCAGCAACA GAAAACCTGGGAGCGGCTAGCTGAGCAATTGCGAGACGCGCCTATCATTC AAGAGATTTTAAAAGCGGGCACGAAGCTGGCGGACACAGAGCTCGGTCGG CAGGCGGGAAAGCTGAGGGGCAAGCTCCAGGACCGGGTGGAAGACGCGCG GGAGCTGTGGGAGACGAGTCAGAACCCGATCGTGTACAAGCTCTCCTCCA TGTGGGACGACCTGACCTCGGAGACGGAGCTGGGCATTGCCTTGCGGGAG ATCCGGCGAGCGGACCCGGACTTCGTGGTGGAGGACTGGGTGAACACGCT GTCCGAGTCCTTCCTGCCCCTCTTCTTCAAGGCCTACCTGAAGGGGGACC TGAAGACGCTCAAGCCCTACCTCTCGGAGGGGATGTACAGGCAGATGGCG GAGGAATTTCGTCTCCGCAAGGCCGAGGGCCTGGCGCTGGACCCGCACGT GCTCGAGATCAGCAACGCCGAGATCGTACAGGCCAAGCTCCACGACCACC AGCCCGTCCTCGTCCTGGGGACGCTCATCCAGCACATCAACTGTGTGCGG AATCGGGAAGGGGCGATCGTCGAGGGGAAGGAAGATGAGGTACGAGCCTC CTTTTACCTGCTGCTGTTTGTGCGGGAGTACGACGAGAAGGAGGGGGCTT TGCAGTGGAAGATCCAGGAGCGGTACCTGGGCTTCTCCCAGCCCTTCATT TAGATGCTGCGGCAGGGCTTGACCAAGTTGCGGCACTCTCATCATGCCGG TAAGAGAGTACAGCAGGTTCAGGAAAAGTACAAGGGGCAGGTGACGTCAA CGCTCCTGTCGCATCAAAAAGGAGGCACTTGGGAAGGTATTCATGCGTCT AGAGGAGGGTGCCGGGCGATGAGTGGTGGATTTTTCGACCAACTTCGACA ATCACTTAAGAAGGAGGTGGAACAGAATAAAGAGTTCAAGGAAAGCCTGT CAAAGCTAAGGAAGGAGACGGGAGACTTGACGGGAAAAGCTCAGGAGAAC TCCTCCAAGTTGGCGGAAAGCATGCACAAGTTGTCATCGACTGTATCCAG CCGCCTGAATGAGACAAGAGAAAGTTTGAGCAAGAACTCCCAGGTACTCA TGTTGCAGTTAAAAGAGAAAGTAGGGGCATCGCAGGCGGAGGAAAGCGAA AAGAAAGGTGAGGGGGCAAGGAGAGATTCCCCCTCTCCTGTCAAGTCGCA CGCGGAAGTCTCTCACAAGGAAAGCCCGACTTCCTCCAAGAGCGCATCAA GTCATGCTGACGGTCATCATGAGTCGCCCGCACGGGAGGGAGGACGGAGA AGAACCCTCGAGGAGGCCAGCCAGGCCGCTGAAGAAGACCCTGTGAAAGC GTCGGGCGCCGAGGACTCCGCAGGGCGCAAGGAAGAAGCATCAAGGGACG AGACGGAGGCCTCATCCACCTCTTCCTCCAGTGGAGGGACGGGTGCTGGC AGTGGTGCGTCTGGGGGGAAGGAGAATGTGTTTACAAGGTGGTTGGCGGG ACGCCCTCCTCGGGAGTCCGTCCGAGTCTTTGTTCGGGACTTCCAGGTGG GCCTGAGGGAGGCGTTTGCGGACCTGTTTGGGATGCGGGAAAAGAGCACC GGTATGAGGAAGCACATTTATCAACAAAGAGCTTCGGAAGCGGATGGGGA AGCCGGGAAGCAAGAGGGAGAGGAGGGGGAGAAGGGGGAGGCGGGGGAGG AGAAAAAAAAGAACGCCGGGGGCGCCTTGGTGGTGGTGAAGCAGCAACAG AAAACCTGGGAGCGGCTAGCTGAGCAATTGCGAGACGCGCCTATCATTCA AGAGATTTTAAAAGCGGGCACGAAGCTGGCGGACACAGAGCTCGGTCGGC AGGCGGGAAAGCTGAGGGGCAAGCTCCAGGACCGGGTGGAAGACGCGCGG GAGCTGTGGGAGACGAGTCAGAACCCGATCGTGTACAAGCTCTCCTCCAT GTGGGACGACCTGACCTCGGAGACGGAGCTGGGCATTGCCTTGCGGGAGA TCCGGCGAGCGGACCCGGACTTCGTGGTGGAGGACTGGGTGAACACGCTG TCCGAGTCCTTCCTGCCCCTCTTCTTCAAGGCCTACCTGAAGGGGGACCT GAAGACGCTCAAGCCCTACCTCTCGGAGGGGATGTACAGGCAGATGGCGG AGGAATTTCGTCTCCGCAAGGCCGAGGGCCTGGCGCTGGACCCGCACGTG CTCGAGATCAGCAACGCCGAGATCGTACAGGCCAAGCTCCACGACCACCA GCCCGTCCTCGTCCTGGGGACGCTCATCCAGCACATCAACTGTGTGCGGA ATCGGGAAGGGGCGATCGTCGAGGGGAAGGAAGATGAGGTACGAGCCTCC TTTTACCTGCTGCTGTTTGTGCGGGAGTACGACGAGAAGGAGGGGGCTTT GCAGTGGAAGATCCAGGAGCGGTACCTGGGCTTCTCCCAGCCCTTCATTT AGATGCTGCGGCAGGGCTTGACCAAGTTGCGGCACTCTCATCATGCCG back to top
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