EWM24233.1, cds6449 (CDS) Nannochloropsis gaditana

Overview
NameEWM24233.1
Unique Namecds6449
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:570483..570528 -
Alignment locationCM002468.1:568698..570400 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24233.1
ProductMembrane transporter, Tim44-related/Ribosomal protein L45
Orig transcript idgnl|cribi|Naga_100020g12.5366.mrna
GeneTIM44
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:570483..570528 -
CM002468.1supercontigCM002468.1:568698..570400 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: INTERPRO
TermDefinition
IPR007379Tim44-like_dom
Homology
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|585105624|gb|EWM24233.1| (Membrane transporter, Tim44-related/Ribosomal protein L45 [Nannochloropsis gaditana])

HSP 1 Score: 1180.62 bits (3053), Expect = 0.000e+0
Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query:    1 MLRQGLTKLRHSHHAGKRVQQVQEKYKGQVTSTLLSHQKGGTWEGIHASRGGCRAMSGGFFDQLRQSLKKEVEQNKEFKESLSKLRKETGDLTGKAQENSSKLAESMHKLSSTVSSRLNETRESLSKNSQVLMLQLKEKVGASQAEESEKKGEGARRDSPSPVKSHAEVSHKESPTSSKSASSHADGHHESPAREGGRRRTLEEASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGSGASGGKENVFTRWLAGRPPRESVRVFVRDFQVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQPVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 582
            MLRQGLTKLRHSHHAGKRVQQVQEKYKGQVTSTLLSHQKGGTWEGIHASRGGCRAMSGGFFDQLRQSLKKEVEQNKEFKESLSKLRKETGDLTGKAQENSSKLAESMHKLSSTVSSRLNETRESLSKNSQVLMLQLKEKVGASQAEESEKKGEGARRDSPSPVKSHAEVSHKESPTSSKSASSHADGHHESPAREGGRRRTLEEASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGSGASGGKENVFTRWLAGRPPRESVRVFVRDFQVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQPVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI
Sbjct:    1 MLRQGLTKLRHSHHAGKRVQQVQEKYKGQVTSTLLSHQKGGTWEGIHASRGGCRAMSGGFFDQLRQSLKKEVEQNKEFKESLSKLRKETGDLTGKAQENSSKLAESMHKLSSTVSSRLNETRESLSKNSQVLMLQLKEKVGASQAEESEKKGEGARRDSPSPVKSHAEVSHKESPTSSKSASSHADGHHESPAREGGRRRTLEEASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGSGASGGKENVFTRWLAGRPPRESVRVFVRDFQVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQPVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 582          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|1214711415|gb|OWZ22428.1| (Mitochondrial Protein Translocase [Phytophthora megakarya])

HSP 1 Score: 246.128 bits (627), Expect = 3.312e-71
Identity = 180/531 (33.90%), Postives = 276/531 (51.98%), Query Frame = 0
Query:   53 CRAMSGGFFDQLRQSLKKEVEQNKEFKESLSKLRKETGDLTGKAQENSSKLA-ESMHKLSSTVSSRLNETRESLSKNSQVLMLQLKEKVGASQAEESEKKGEGARRDSPSPVKSHAEVSHKESPTSSKSASSHADGHHESPAREGGRRRTLEEASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGSGASGGKENVFTRWLAGRPPRESVRVF--VRDFQVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDAR----ELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
             RAM  GFF  L+  LK E+++N+E K+S  +L K     T +  +N  K A E M ++SS          E  +KN         E+  ASQA                               S K   S+ +    + A++     T +EA+ AAE+       AE S G+KEEA     +AS +           GA    +  F   +A +        F  +RD     ++A  +LFG REK T     + +  AS       K +  E ++ EA E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  K   +++D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YD+++  L+W+I + ++
Sbjct:   29 TRAM--GFFSDLKNQLKNEMDKNEELKKSFEELEK-----TKEQFKNVEKAAKEKMSEMSSMT--------EDAAKN-------FHEQ--ASQA-------------------------------SQKIKESYEETAKAAAAKKKEEESTDKEATGAAEQ-------AEQSEGKKEEAGEKPEQASESE---------EGARAFVKKFFAGIIAQKDKLIHPSKFPQLRD---EWKDAAQELFGKREKQT-----VDEALASVRTPSMQKPQKSENDEEEAAE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGQKVQKTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDDEQETLRWRIVDLHM 477          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|325191254|emb|CCA26040.1| (Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii Nc14])

HSP 1 Score: 243.047 bits (619), Expect = 6.806e-71
Identity = 142/380 (37.37%), Postives = 213/380 (56.05%), Query Frame = 0
Query:  204 EASQAAEEDPVKASGAEDSAGRKEEASRDETEASSTSSSSGGTGAGSGASGGKENVFTRWLAGRPPRESV---RVFVRDFQVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAG----KLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            E+SQ+ +E        ++   ++ E ++ + + S   S+ G  G  + A        T   A +  +ES+    +    FQ   +EA  ++FG +EK +        +R   +     K++GEE   G +          ALVVVK+Q   W++++ + R+APIIQ IL A  K A TE GR  G    K R KL D  E+  E WETSQNP +Y+LSS++D    ET +GIA+REIRRA+P+F++E W   ++E  LP    A+LKG  + LK +  E  Y ++    R RK+EGL +DP+VLEI N ++++A   D Q P++++    Q INC+RNREG IVEG EDEV A +Y+  F REYDE    L+W+I + ++
Sbjct:   48 ESSQSVDE--------QNDKNQEREHTKSDKKTSEEKSNDGYEGVATFAK-------TFLTAAKSYKESILRNTINSNSFQEEWKEAVKEVFGAKEKRSIDEALSSTKRQPYSSPAKTKKDGEEEYTGTS----------ALVVVKEQDTAWQKISARFREAPIIQSILDAAKKAARTEAGRNVGTKAKKAREKLDDAREEVLEFWETSQNPWIYRLSSLYDGFFGETSMGIAIREIRRAEPEFILEQWKEDIAEFVLPGVLDAFLKGRSRDLKKWFGEAAYNRINIAIRERKSEGLVMDPNVLEIDNVDVIEASAEDKQAPIILVRFRSQQINCIRNREGEIVEGAEDEVLAYYYIFAFQREYDESTERLRWRIVDVHM 402          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|970649187|gb|KUF88525.1| (hypothetical protein AM588_10006935 [Phytophthora nicotianae])

HSP 1 Score: 242.662 bits (618), Expect = 2.936e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  130 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 448          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|570313958|gb|ETO61906.1| (hypothetical protein F444_20138 [Phytophthora parasitica P1976])

HSP 1 Score: 243.432 bits (620), Expect = 5.340e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  167 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|675210651|ref|XP_008914210.1| (hypothetical protein PPTG_17989 [Phytophthora parasitica INRA-310] >gi|568085635|gb|ETN00539.1| hypothetical protein PPTG_17989 [Phytophthora parasitica INRA-310] >gi|570968033|gb|ETP31152.1| hypothetical protein F442_19953 [Phytophthora parasitica P10297])

HSP 1 Score: 243.047 bits (619), Expect = 5.747e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  167 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|568005883|gb|ETL80161.1| (hypothetical protein L917_19318 [Phytophthora parasitica] >gi|568035781|gb|ETM33409.1| hypothetical protein L914_19353 [Phytophthora parasitica])

HSP 1 Score: 243.047 bits (619), Expect = 5.931e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  167 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|567976390|gb|ETL26914.1| (hypothetical protein L916_19478 [Phytophthora parasitica] >gi|570937744|gb|ETP03001.1| hypothetical protein F441_20004 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 243.047 bits (619), Expect = 6.452e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  167 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|567947710|gb|ETK73484.1| (hypothetical protein L915_19587 [Phytophthora parasitica])

HSP 1 Score: 243.047 bits (619), Expect = 6.871e-70
Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query:  274 RVFVRDFQVGL--------------------REAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAGKLRGKLQDRVEDARE----LWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 575
            R FVR+F   +                    +EA  +LFG REK T     + +  AS       K +  EGE  E  E        ALV VK+++  W+R++ + R+APIIQ IL A  + A TE G++  +   +++D++ DA+E    +WETSQNP VY+LSS++D L  ET +G+A++EIRRA+PDF++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG +VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  167 RAFVRNFFTSIAAQKNKLIHPSKFPKLRDEWKEAAQELFGKREKQT-----VDEALASVRTPSVQKPQKSEGEDEEPTE---YTGTSALVAVKEEESAWQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485          
BLAST of EWM24233.1 vs. NCBI_GenBank
Match: gi|698777574|ref|XP_009821831.1| (hypothetical protein H257_00717 [Aphanomyces astaci] >gi|574123956|gb|ETV89431.1| hypothetical protein H257_00717 [Aphanomyces astaci])

HSP 1 Score: 240.736 bits (613), Expect = 7.029e-70
Identity = 126/307 (41.04%), Postives = 181/307 (58.96%), Query Frame = 0
Query:  281 QVGLREAFADLFGMREKSTGMRKHIYQQRASEADGEAGKQEGEEGEKGEAGEEKKKNAGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTE----LGRQAGKLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQ-PVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 582
            Q  L+E   ++FG  +K     K + +   S        +E    +  EA          A+VVVK +Q  WER+A +LR+ PIIQ +L A  + A TE    LG  A K R K+ D  ED RE WETSQNP VY++SS++D L  ET   IA++EIRRADP F VE W + ++E+ +P    A+L+G+ + LK ++ E  Y  +    R RKA+GL +DP++L I N  ++     D Q P++ +  + Q INC+RNREG IVEG +D+++A+FY+  F REYDE+  AL+WKI E  +  S P+I
Sbjct:  116 QETLKETLYEVFGWNKK-----KSVEETLTSSLADTRAPKETSSDDDDEAAATPAYTGTTAMVVVKGEQTAWERVASRLRETPIIQGLLDAANQAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETPESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKADGLVVDPNILAIRNVTVIALSAEDKQAPIIGIQLMAQQINCIRNREGEIVEGADDDIQANFYIFAFRREYDEEASALKWKIVEFGVIGSVPYI 417          
The following BLAST results are available for this feature:
BLAST of EWM24233.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105624|gb|EWM24233.1|0.000e+0100.00Membrane transporter, Tim44-related/Ribosomal prot... [more]
gi|1214711415|gb|OWZ22428.1|3.312e-7133.90Mitochondrial Protein Translocase [Phytophthora me... [more]
gi|325191254|emb|CCA26040.1|6.806e-7137.37Mitochondrial Protein Translocase (MPT) Family put... [more]
gi|970649187|gb|KUF88525.1|2.936e-7039.14hypothetical protein AM588_10006935 [Phytophthora ... [more]
gi|570313958|gb|ETO61906.1|5.340e-7039.14hypothetical protein F444_20138 [Phytophthora para... [more]
gi|675210651|ref|XP_008914210.1|5.747e-7039.14hypothetical protein PPTG_17989 [Phytophthora para... [more]
gi|568005883|gb|ETL80161.1|5.931e-7039.14hypothetical protein L917_19318 [Phytophthora para... [more]
gi|567976390|gb|ETL26914.1|6.452e-7039.14hypothetical protein L916_19478 [Phytophthora para... [more]
gi|567947710|gb|ETK73484.1|6.871e-7039.14hypothetical protein L915_19587 [Phytophthora para... [more]
gi|698777574|ref|XP_009821831.1|7.029e-7041.04hypothetical protein H257_00717 [Aphanomyces astac... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6465rna6465Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications