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Properties
| Property Name | Value |
|---|
| Product | SUZ domain protein |
| Orig transcript id | gnl|cribi|Naga_100020g22.5383.mrna |
| Orig protein id | gnl|cribi|Naga_100020g22.5383 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:541365..543491 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6455 ID=rna6455|Name=rna6455|organism=Nannochloropsis gaditana|type=mRNA|length=1658bp
TCCAGCCCCCGAGACCTTGCTGCTCGTGTGATTTGAAGTCCGTTTGGCAT
CATTCGCTACTCCACTCGCCGCGCTTCCGAGCATTTCTAAATATTTCTAT
TGTTTCCTAAGTAAGGAAAGACGCCGAGGAGAACTCGAGAAGTAGAGGGG
AGGTCGGGACGGTCTAACCTGCTGTGCGTGCTTTCATAATCTGCACCGTC
AGCCCTCTGGCAAGCGACTATACGTAATGCAGAGGCCTATTTGAAAATTA
CGCTAGCATTGCCAGCAGGGCGATCTCGGCACCCTCAATAAAAACGCGCA
CCTCCTAGAGCGACTCAGAGCGCGGATTCAGTAATCGTAGCCAGACCACC
ATGTGTGACAGCCTACTTACAGAGTTGACGCGCTTGAGAGAGAAGCAGCG
TCAGAATACTGAAATTATGCTGCGGCTGGTGAACAGTGTAGGCGCTGCAC
TTGAAGACAGCTTGGGAGAGCCGACGACGCCTCAAGTTCCTCATAGTTCA
TTGGAAGATATCATGCCTCAGCTTGTCCAGCAACATAAGACGTACCATGC
CGCCCTATCAAAGATGACTAAAAGCGTGGACCGCGTGTTCCTAGACGCGA
CGCCCCCCGTCTTCATGTGCCGTCCGCTTCGTAAAGAGGACCGGGGTCTC
GTCGACCAGATGGTGGGTCAGCACCTTTACCGCCGGGGCAGGACGCGCAC
TGCGGTCAAGTTGGTGCAGGAGGCGGGACTCTGCTCTTCAGCCCTGAATT
TGCAGGCCCATGAGGCTTTGGCGCGGGTCCACGAGGTGATTGCCGCCGCC
AGCAAGAAAAGGGACTTGGGCCCCGCCCGGGCATGGGCGGCGGAGCACCG
AGAGGGTTTGAAGCATGTGGGGAGTAACTTGGAGTTCAAGCTCGCGCGCT
TGCAGTTCGTAAAGCTGGTAGCAGGGGACGGATCACAAGGTAAAAGGGCT
GAGGAGGACGCGAAGGAGGAGGAGGAGGAAACCCCCTTGGGCTGTGAAGG
GGAGGCCTCGACGCACCAGGACGACTTGGCCATATCCTTTGCACGAGAGC
ATCTAGCGCCCTTTGCAGTGGAGGGGGGAGGGAACGCAGAGGAGGTGCGG
AAACTGATGGGAAGCTTGCTCTACGCGGGCCGCTTGGACAGGTCCCCCTA
CAAGCGGTACCTGGCCCCCAGGCTATGGGCGGACGCCATGGAGGCGCTGC
ACACGGAGGGCTGCCGCATGCTGGGCCTGCCGGTCGAGAGCTCGCTCAGC
GTCTGCTATCGTGCCAGCCTGCACGCGATGGGGCCTCTGGCGAAGATGCG
ACAAGTGGTGCTGAACAGCAAGGGCGACTGGGAGGCCCTCGAGGAGCTCC
CGGGAGGCATCGAGTGGGGCCGGGACTCCTCTTTGCGATTCCACAGCGTC
TTCTCCTGCCCCGTGACGCGGGAGCAAGCCAGTCGCGCAAATCCGCCCAT
GGTGCTCAAATGCGGCCACGTGATATGTCGCAACAGCCTGAATCGGCTTC
TGAAGCCGCAGACCGCGGGCGGCCGAGCCAGTCAGGGTCAGCACCGGTTC
AAGTGCTTCATCTGCCCCGTAGAGCAGACCCTACAGGATGCACAGCAGAT
ATATTTTTGAAGGTAGCACAAAGAAAATGTGTAAATCCAGCCACAGCAAC
GGAAAGCG back to topprotein sequence of rna6455 >rna6455-protein ID=rna6455-protein|Name=rna6455|organism=Nannochloropsis gaditana|type=polypeptide|length=497bp
MADEEDWGPAPLPDFNRLRLGGRGAPATSANVTPSEAAGIAGKGLSSAGI
VAVTTVERDAAIDPILTGAMDNPRERVNVLRYEDAMVQFMKAGTKQQQLE
LSPNSSYHRLVLYRLAHRFGLHGAAEGEVGADAGGNRSVKFFKTPQSSIP
HLLLIDTCGKEGVNGSGEGSGSGSAKAPVMRLMQRRRTPGGDSEAKEGAV
RGKGSGEEKTSSTVNGARSVIDREKAYAEARARIFGSSSSTTASTSSPSP
TRPLDSKGKTANPSNGAKLGLGRTSRAGSPAADGLSTPPPSAGPGLLEEG
ARSSLEEEARKPRGGAGEQEEKCNGGKMEWGESKVLWRNREAERYDPDFV
RHRPPRGLGGGDPYGPGGRGAVYGVPPQPPYGAMPGMTIPSNPALAAYPP
ASYAQPHLQMQLEQHQWAAYHQHPQAHHQGAFLAAHHPPHAYYNDPRYAS
QSPHPYQQGGGGRGRGESRSILEGALSAAPLARIERGERCRPKTERR back to topmRNA from alignment at CM002468.1:541365..543491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6455 ID=rna6455|Name=rna6455|organism=Nannochloropsis gaditana|type=mRNA|length=2127bp|location=Sequence derived from alignment at CM002468.1:541365..543491- (Nannochloropsis gaditana)
CGTCACTCTCCACTTTTTCTTTCCCTTATTGAGGTTGAAGACGCAGCAAT
CTGCTCTGAGCGCCCTGTGATTTGTGATTTACTCAAAGTCAGGACGAGTG
TTGCAAGACGGGGATAGAAGTAGACCGCTCCCGTGCCAAGTTCTATGCTC
TCGGCGAGCCTCGCGACAAAAGCCCTGTCGGCGGTCTCACCACCCGCGGA
AGCCGACGCGCGACGAGTGTGCTCCGGGCACTTCAAAGGCAGTGCAGGAA
TGCCTGTCCTTGGGGTCGTTTGGGGGTCGTTTGGAGGTGCCCCCGTTGAG
TGAATGTAAAGTGGCAGAGGTGGAAGGAAACGTGGGTGGTGCGTGTTCCA
AGCAAAGGGGGCGGCGGGGAGGCGACAGGGCCTTGCACTCTGGCAGGCGT
GACGATGAAACGCTAACCATAAGAGACCACGCAGTGCACGCAGGTATATG
GCGGACGAGGAGGACTGGGGCCCTGCCCCACTGCCAGACTTTAATCGACT
TCGGCTTGGTGGACGGGTAAGTAGACAAGCACGTACGGGGGAAAGGTAGG
GTACGCAAAGCAATGACGCTTCCACGCTGAGAGCCAACCTTTCCCGCACA
CAGGGCGCACCTGCTACTAGCGCTAATGTAACACCGTCCGAAGCTGCAGG
GATAGCTGGAAAGGGCCTGTCTTCGGCGGGCATCGTGGCAGTGACGACGG
TCGAGCGTGACGCTGCCATCGATCCAATTTTGACGGGGGCAATGGACAAT
CCGAGGGAGCGCGTAAATGTGCTCAGATACGAGGATGCCATGGTACAATT
TATGAAGGCCGGTACGAAACAGCAGCAGCTGGAGTTGTCCCCGAACTCAT
CTTACCACCGGCTCGTCTTGTATCGCCTCGCCCATCGTTTCGGCCTGCAC
GGGGCCGCGGAGGGAGAGGTAGGGGCCGACGCGGGCGGGAACCGGAGCGT
CAAATTTTTCAAGACACCACAGAGCAGCATTCCCCATCTCTTACTCATCG
ACACGTGTGGAAAAGAGGGGGTGAACGGGAGTGGCGAAGGAAGCGGCAGC
GGGAGTGCCAAAGCCCCCGTAATGAGGCTTATGCAGCGCCGGCGGACGCC
CGGGGGAGACTCAGAAGCGAAGGAAGGAGCGGTGCGGGGCAAGGGTTCCG
GCGAGGAGAAGACATCCAGTACGGTGAACGGGGCTAGAAGCGTGATCGAC
AGAGAGAAGGCCTACGCGGAGGCCAGGGCCCGGATTTTTGGCTCCTCCTC
GAGCACGACCGCCTCCACCAGCTCCCCTTCGCCCACCAGACCTCTAGATA
GCAAGGGGAAGACAGCCAACCCTTCGAACGGAGCCAAGCTCGGGCTCGGC
AGGACATCACGGGCAGGGTCGCCTGCGGCGGACGGCCTTTCCACCCCCCC
GCCCTCCGCGGGCCCCGGGCTCCTGGAGGAGGGGGCGCGGTCGAGTCTCG
AGGAGGAAGCGAGGAAACCGAGAGGAGGGGCGGGGGAGCAGGAGGAGAAA
TGCAACGGCGGGAAAATGGAGTGGGGCGAGAGCAAGGTCTTGTGGCGAAA
CCGGGAGGCAGAGCGCTACGACCCGGACTTCGTGCGACACCGGCCACCTA
GGGGATTGGGCGGGGGGGACCCCTACGGCCCTGGAGGGAGGGGGGCGGTG
TACGGTGTCCCTCCGCAGCCCCCCTACGGCGCGATGCCTGGCATGACTAT
TCCTTCCAACCCTGCCCTGGCGGCGTACCCCCCGGCTTCCTACGCACAGC
CGCACCTGCAGATGCAGCTGGAGCAGCACCAATGGGCCGCCTATCACCAG
CACCCACAGGCGCACCACCAGGGAGCTTTCTTGGCCGCCCATCATCCCCC
CCACGCCTACTATAACGACCCTCGGTATGCGTCACAGTCTCCACATCCCT
ACCAGCAGGGGGGGGGGGGCAGGGGCCGGGGGGAGAGCCGATCCATCCTT
GAGGGGGCCCTCTCCGCCGCCCCTCTCGCGCGCATTGAGCGAGGGGAGCG
ATGTAGACCTAAGACAGAGAGAAGATGAATTTCCCCCGCTGAGTAGATAG
GTAAATCTAGGAAAATTAAGGAGTTCAGAGGCTGAAAGCCGAATTCTTAA
AGAAATCGAGACACGAGACGTCAAGGG back to topCoding sequence (CDS) from alignment at CM002468.1:541365..543491- >rna6455 ID=rna6455|Name=rna6455|organism=Nannochloropsis gaditana|type=CDS|length=2988bp|location=Sequence derived from alignment at CM002468.1:541365..543491- (Nannochloropsis gaditana)
GGCGCACCTGCTACTAGCGCTAATGTAACACCGTCCGAAGCTGCAGGGAT
AGCTGGAAAGGGCCTGTCTTCGGCGGGCATCGTGGCAGTGACGACGGTCG
AGCGTGACGCTGCCATCGATCCAATTTTGACGGGGGCAATGGACAATCCG
AGGGAGCGCGTAAATGTGCTCAGATACGAGGATGCCATGGTACAATTTAT
GAAGGCCGGTACGAAACAGCAGCAGCTGGAGTTGTCCCCGAACTCATCTT
ACCACCGGCTCGTCTTGTATCGCCTCGCCCATCGTTTCGGCCTGCACGGG
GCCGCGGAGGGAGAGGTAGGGGCCGACGCGGGCGGGAACCGGAGCGTCAA
ATTTTTCAAGACACCACAGAGCAGCATTCCCCATCTCTTACTCATCGACA
CGTGTGGAAAAGAGGGGGTGAACGGGAGTGGCGAAGGAAGCGGCAGCGGG
AGTGCCAAAGCCCCCGTAATGAGGCTTATGCAGCGCCGGCGGACGCCCGG
GGGAGACTCAGAAGCGAAGGAAGGAGCGGTGCGGGGCAAGGGTTCCGGCG
AGGAGAAGACATCCAGTACGGTGAACGGGGCTAGAAGCGTGATCGACAGA
GAGAAGGCCTACGCGGAGGCCAGGGCCCGGATTTTTGGCTCCTCCTCGAG
CACGACCGCCTCCACCAGCTCCCCTTCGCCCACCAGACCTCTAGATAGCA
AGGGGAAGACAGCCAACCCTTCGAACGGAGCCAAGCTCGGGCTCGGCAGG
ACATCACGGGCAGGGTCGCCTGCGGCGGACGGCCTTTCCACCCCCCCGCC
CTCCGCGGGCCCCGGGCTCCTGGAGGAGGGGGCGCGGTCGAGTCTCGAGG
AGGAAGCGAGGAAACCGAGAGGAGGGGCGGGGGAGCAGGAGGAGAAATGC
AACGGCGGGAAAATGGAGTGGGGCGAGAGCAAGGTCTTGTGGCGAAACCG
GGAGGCAGAGCGCTACGACCCGGACTTCGTGCGACACCGGCCACCTAGGG
GATTGGGCGGGGGGGACCCCTACGGCCCTGGAGGGAGGGGGGCGGTGTAC
GGTGTCCCTCCGCAGCCCCCCTACGGCGCGATGCCTGGCATGACTATTCC
TTCCAACCCTGCCCTGGCGGCGTACCCCCCGGCTTCCTACGCACAGCCGC
ACCTGCAGATGCAGCTGGAGCAGCACCAATGGGCCGCCTATCACCAGCAC
CCACAGGCGCACCACCAGGGAGCTTTCTTGGCCGCCCATCATCCCCCCCA
CGCCTACTATAACGACCCTCGGTATGCGTCACAGTCTCCACATCCCTACC
AGCAGGGGGGGGGGGGCAGGGGCCGGGGGGAGAGCCGATCCATCCTTGAG
GGGGCCCTCTCCGCCGCCCCTCTCGCGCGCATTGAGCGAGGGGAGCGATG
TAGACCTAAGACAGAGAGAAGATGAATGGCGGACGAGGAGGACTGGGGCC
CTGCCCCACTGCCAGACTTTAATCGACTTCGGCTTGGTGGACGGGGCGCA
CCTGCTACTAGCGCTAATGTAACACCGTCCGAAGCTGCAGGGATAGCTGG
AAAGGGCCTGTCTTCGGCGGGCATCGTGGCAGTGACGACGGTCGAGCGTG
ACGCTGCCATCGATCCAATTTTGACGGGGGCAATGGACAATCCGAGGGAG
CGCGTAAATGTGCTCAGATACGAGGATGCCATGGTACAATTTATGAAGGC
CGGTACGAAACAGCAGCAGCTGGAGTTGTCCCCGAACTCATCTTACCACC
GGCTCGTCTTGTATCGCCTCGCCCATCGTTTCGGCCTGCACGGGGCCGCG
GAGGGAGAGGTAGGGGCCGACGCGGGCGGGAACCGGAGCGTCAAATTTTT
CAAGACACCACAGAGCAGCATTCCCCATCTCTTACTCATCGACACGTGTG
GAAAAGAGGGGGTGAACGGGAGTGGCGAAGGAAGCGGCAGCGGGAGTGCC
AAAGCCCCCGTAATGAGGCTTATGCAGCGCCGGCGGACGCCCGGGGGAGA
CTCAGAAGCGAAGGAAGGAGCGGTGCGGGGCAAGGGTTCCGGCGAGGAGA
AGACATCCAGTACGGTGAACGGGGCTAGAAGCGTGATCGACAGAGAGAAG
GCCTACGCGGAGGCCAGGGCCCGGATTTTTGGCTCCTCCTCGAGCACGAC
CGCCTCCACCAGCTCCCCTTCGCCCACCAGACCTCTAGATAGCAAGGGGA
AGACAGCCAACCCTTCGAACGGAGCCAAGCTCGGGCTCGGCAGGACATCA
CGGGCAGGGTCGCCTGCGGCGGACGGCCTTTCCACCCCCCCGCCCTCCGC
GGGCCCCGGGCTCCTGGAGGAGGGGGCGCGGTCGAGTCTCGAGGAGGAAG
CGAGGAAACCGAGAGGAGGGGCGGGGGAGCAGGAGGAGAAATGCAACGGC
GGGAAAATGGAGTGGGGCGAGAGCAAGGTCTTGTGGCGAAACCGGGAGGC
AGAGCGCTACGACCCGGACTTCGTGCGACACCGGCCACCTAGGGGATTGG
GCGGGGGGGACCCCTACGGCCCTGGAGGGAGGGGGGCGGTGTACGGTGTC
CCTCCGCAGCCCCCCTACGGCGCGATGCCTGGCATGACTATTCCTTCCAA
CCCTGCCCTGGCGGCGTACCCCCCGGCTTCCTACGCACAGCCGCACCTGC
AGATGCAGCTGGAGCAGCACCAATGGGCCGCCTATCACCAGCACCCACAG
GCGCACCACCAGGGAGCTTTCTTGGCCGCCCATCATCCCCCCCACGCCTA
CTATAACGACCCTCGGTATGCGTCACAGTCTCCACATCCCTACCAGCAGG
GGGGGGGGGGCAGGGGCCGGGGGGAGAGCCGATCCATCCTTGAGGGGGCC
CTCTCCGCCGCCCCTCTCGCGCGCATTGAGCGAGGGGAGCGATGTAGACC
TAAGACAGAGAGAAGATGAATGGCGGACGAGGAGGACTGGGGCCCTGCCC
CACTGCCAGACTTTAATCGACTTCGGCTTGGTGGACGG back to top
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