rna6444, rna6444 (mRNA) Nannochloropsis gaditana

Overview
Namerna6444
Unique Namerna6444
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length678
Alignment locationCM002468.1:522231..523706 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100020g35.5382.mrna
Orig protein idgnl|cribi|Naga_100020g35.5382
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:522231..523706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100020g35gene6226Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6444rna6444-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24249.1cds6428Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6444 ID=rna6444|Name=rna6444|organism=Nannochloropsis gaditana|type=mRNA|length=678bp
ATGGACGTGGACGATACGATGGTCAATGTCTCCGAGCTGCAAAAGCTTGG
CGTGAACGCTGCCGATATCGCTAAGCTTGTTGAAGCCGGAATTTCGACTG
CGGGCATGGTGTGTAAGGTCCCATTGAAAGTATTGCTGGCAATTAAGGGC
TTTAGCGAGGCCAAGGTAGAGAAAATTCGATCAAGTGCACGAAAGCTGAC
CGGCGGCACATCGCATCCATTTCGGACGGGTACTGAGGTCCGTGAACAAC
GCAAACGTTGCATAAAAATTACAACTGGCGCTAAAACTTTTGACGCAATT
CTGGGCGGTGGTGTTGAAAGTGGAAGTATCACGGAGGCATACGGAGAGTT
TCGTACAGGTAAAACCCAGCTTTCCCACACCCTGGCTGTGACTTGTCAGC
TAGGGTTTGATCAAGGCGGCGGGCAAGGAAAATGCATCTATCTGGACACA
GAGGGCAATTTTCGTCCTGAACGCATCGAGAAAATTGCTGAGCGCTTTGG
TTTGGATGCAGATGCTACTTTAGACAACATAATTGTCGCCCGTGCCTATG
CATCCGTGCGAGCTATTAAAACCTCTAGCGGCTTTAATCGCAGAGCATGG
TCCTTTCCGGATGCTGATAATCGACTCAATCATCGCCTTGTTCCGGGTCG
ATTACTCTGGACGCGGCGAACTATCTGA
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protein sequence of rna6444

>rna6444-protein ID=rna6444-protein|Name=rna6444|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MSSSAVDAATARSDPRCEFRRLVDANILKCVESMGQLIKTAKMGSTREDA
HMDANRVTILTGTILQSSEQLLTQIEQLKRLHVLQDFDTINTELDRDVIS
LEARIEALDAETEHWKAVVQSAANRKLASAVDGLA
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mRNA from alignment at CM002468.1:522231..523706-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6444 ID=rna6444|Name=rna6444|organism=Nannochloropsis gaditana|type=mRNA|length=1476bp|location=Sequence derived from alignment at CM002468.1:522231..523706- (Nannochloropsis gaditana)
AGGGGGACAAGGGCACGAGGTCAACGTCAACGACGGCGGAAGAGTTTCAA
GTCAAGGCATAAGAATCTCACGTCACACTAGATTAGGTCACTTCTAGTCC
AGTAGTACGGGCCTTTATGTCATCTTCAGCCGTAGACGCTGCAACTGCGA
GGTCGGACCCCCGCTGTGAGTTCCGACGGCTGGTAGACGCCAACATTTGT
AAGTTATGTAGAGGATAAGGAAGTGGCAGGACGCACGTGAAACATAAAGA
GGTGAAAAATATCCATTTTATTGACCCTCATATGCAGTGAAATGCGTGGA
ATCCATGGGGCAGCTCATAAAGACAGCAAAGGTGCGTGACTGGCCGTTAC
ATTACCAGGTTTCTAAATGGAAGAAATTTATGTATACTGCATTTATTATC
ACATCTCAGATGGGCTCAACGCGGGAAGATGCGCACATGGACGCCAACCG
TGTAACCATATTGACCGGGACCATTGTAAGTGTCATAGATCCTTCCGAGT
ATCTTTCTGTGGAATCATGCAGACATATCCATCTCGTTTATTTTTATTTA
CCTGTCGGAGTTTTGGCTTGAAGTCCGTTTTTGGCATTCGTCTCAAGTAT
GCTTCAAGTTCTTTGTGTGCAAGCTTTAAACTTGGATTCTAATTCACAAG
TTCAGTAATCGTAGAGTATTCTGTAGGGCCACCAGACCGACAAAAGAATC
TGAGAAACCTATCGTCGCCTTATGGATTTGTATCCTGTACATCCTGCAAT
GAATTGCTGTCAAACGTGGAATGTAGGATCTTTGAAATCTTTTTTAGTCG
GCGAATGACGTGTGAATGTGAAAAATGCAGCGAATACTACTTCCTCATAC
ATATCTTAATGTCTCAACTACACAGCTACAAAGCAGTGAGCAACTATTGA
CACAGATCGAGCAATTGAAACGCCTGCACGTGCTACAAGACTTTGATACC
ATAAATACGGAATTGGATCGAGACGTCATTTCTTTGGAAGCCAGGTGAGA
AGGACATGGGATTGATCCCAACAGCATGGTGCATTGATAACTAGTGTGAG
TATGCCATAGGGAAAGCGTGTTGCATTTGTCGTTTAGCCACATCTTTAAG
TACTAACGGCGCAGCTTTCCATGGATGTGGTATCTATCTTCACCTTTCTA
CAGGATTGAAGCACTGGACGCCGAGACGGAACATTGGAAGGCTGTTGTTC
AGAGTGCTGCAAACAGGAAATTAGCCTCCGCAGTAGATGGCTTGGCATGA
GTCCTTATTCAATTACTATAGTCGGTGCGAATGAAATCTAGGAGCCAAGG
GTCGGCGAAGGGCAGAGAGAGAAATGTACAGGCATCTGAGAGGCAAAAAT
GTGATTCAAATTGCTCCTTGGCATATTGCAAATGACTAGAAATTTTATGC
GCGCATATGTAATTTATGCGACGGTCGCAAAAATAGAAATTGACACAATC
TTTGACCAAAAAATCGATCTAGGTCC
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Coding sequence (CDS) from alignment at CM002468.1:522231..523706-

>rna6444 ID=rna6444|Name=rna6444|organism=Nannochloropsis gaditana|type=CDS|length=2040bp|location=Sequence derived from alignment at CM002468.1:522231..523706- (Nannochloropsis gaditana)
GATTGAAGCACTGGACGCCGAGACGGAACATTGGAAGGCTGTTGTTCAGA
GTGCTGCAAACAGGAAATTAGCCTCCGCAGTAGATGGCTTGGCATGACTA
CAAAGCAGTGAGCAACTATTGACACAGATCGAGCAATTGAAACGCCTGCA
CGTGCTACAAGACTTTGATACCATAAATACGGAATTGGATCGAGACGTCA
TTTCTTTGGAAGCCAGATGGGCTCAACGCGGGAAGATGCGCACATGGACG
CCAACCGTGTAACCATATTGACCGGGACCATTTGAAATGCGTGGAATCCA
TGGGGCAGCTCATAAAGACAGCAAAGATGTCATCTTCAGCCGTAGACGCT
GCAACTGCGAGGTCGGACCCCCGCTGTGAGTTCCGACGGCTGGTAGACGC
CAACATTTGATTGAAGCACTGGACGCCGAGACGGAACATTGGAAGGCTGT
TGTTCAGAGTGCTGCAAACAGGAAATTAGCCTCCGCAGTAGATGGCTTGG
CATGACTACAAAGCAGTGAGCAACTATTGACACAGATCGAGCAATTGAAA
CGCCTGCACGTGCTACAAGACTTTGATACCATAAATACGGAATTGGATCG
AGACGTCATTTCTTTGGAAGCCAGATGGGCTCAACGCGGGAAGATGCGCA
CATGGACGCCAACCGTGTAACCATATTGACCGGGACCATTTGAAATGCGT
GGAATCCATGGGGCAGCTCATAAAGACAGCAAAGATGTCATCTTCAGCCG
TAGACGCTGCAACTGCGAGGTCGGACCCCCGCTGTGAGTTCCGACGGCTG
GTAGACGCCAACATTTGATTGAAGCACTGGACGCCGAGACGGAACATTGG
AAGGCTGTTGTTCAGAGTGCTGCAAACAGGAAATTAGCCTCCGCAGTAGA
TGGCTTGGCATGACTACAAAGCAGTGAGCAACTATTGACACAGATCGAGC
AATTGAAACGCCTGCACGTGCTACAAGACTTTGATACCATAAATACGGAA
TTGGATCGAGACGTCATTTCTTTGGAAGCCAGATGGGCTCAACGCGGGAA
GATGCGCACATGGACGCCAACCGTGTAACCATATTGACCGGGACCATTTG
AAATGCGTGGAATCCATGGGGCAGCTCATAAAGACAGCAAAGATGTCATC
TTCAGCCGTAGACGCTGCAACTGCGAGGTCGGACCCCCGCTGTGAGTTCC
GACGGCTGGTAGACGCCAACATTTGATTGAAGCACTGGACGCCGAGACGG
AACATTGGAAGGCTGTTGTTCAGAGTGCTGCAAACAGGAAATTAGCCTCC
GCAGTAGATGGCTTGGCATGACTACAAAGCAGTGAGCAACTATTGACACA
GATCGAGCAATTGAAACGCCTGCACGTGCTACAAGACTTTGATACCATAA
ATACGGAATTGGATCGAGACGTCATTTCTTTGGAAGCCAGATGGGCTCAA
CGCGGGAAGATGCGCACATGGACGCCAACCGTGTAACCATATTGACCGGG
ACCATTTGAAATGCGTGGAATCCATGGGGCAGCTCATAAAGACAGCAAAG
ATGTCATCTTCAGCCGTAGACGCTGCAACTGCGAGGTCGGACCCCCGCTG
TGAGTTCCGACGGCTGGTAGACGCCAACATTTGATTGAAGCACTGGACGC
CGAGACGGAACATTGGAAGGCTGTTGTTCAGAGTGCTGCAAACAGGAAAT
TAGCCTCCGCAGTAGATGGCTTGGCATGACTACAAAGCAGTGAGCAACTA
TTGACACAGATCGAGCAATTGAAACGCCTGCACGTGCTACAAGACTTTGA
TACCATAAATACGGAATTGGATCGAGACGTCATTTCTTTGGAAGCCAGAT
GGGCTCAACGCGGGAAGATGCGCACATGGACGCCAACCGTGTAACCATAT
TGACCGGGACCATTTGAAATGCGTGGAATCCATGGGGCAGCTCATAAAGA
CAGCAAAGATGTCATCTTCAGCCGTAGACGCTGCAACTGCGAGGTCGGAC
CCCCGCTGTGAGTTCCGACGGCTGGTAGACGCCAACATTT
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Synonyms
Publications