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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100020g42.5393.mrna |
| Orig protein id | gnl|cribi|Naga_100020g42.5393 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:509566..512082 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6436 ID=rna6436|Name=rna6436|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
ATGTCCTTTTCGGTGCTGCATTGGGCGTGGCAAAAGGCCAGGAGCAAAGT
GGTGGCGGCCGTCGTACCTCGCTTGTCCCCTCTTCACGTGTCTCTCCAGT
GTGATCCTTCCAAGGGCGCGGTCTCACTACCCACAAATGTTTGTGTACGC
GGGAAGCACGGAGCAAAAAGTCATCAGGGAGCCAAGAAGCGTTTCCGACT
GCTCAAATGCGGCGAGATAGTTCGAGGTCACGCCGGCAAAAGTCATAATA
CGGGGCATCGCAGCTCTGTCCAAATGTCGCGGCTCCGCGTAAGCACAACT
GTTGCCCCAACTTTCGTAAGGCGCATCCGAAGGCTACATATTCCACGAGG
CCCTCTGGACGGTTCTTCACGAGAGCTCAAGAGCGCATATGATGAGGTTC
CATGGATATCGTCATGCAACTTCTGTAAAACATCGTACGAAAGTGGGTGT
TCCCAAGTCAAATCCTTTTTTTTTTAG back to topprotein sequence of rna6436 >rna6436-protein ID=rna6436-protein|Name=rna6436|organism=Nannochloropsis gaditana|type=polypeptide|length=651bp
MWRRARDADGKNGVAVDRRTCNNISMRHEKHEPSAAEERAEEEVLLALRM
MCQSGLRHPLHGHSYARYRALRPRVCFSCEAPVFGPFSVACHCLLCGIIV
HRQCVMRITKVPCGNYRGLHDPSGLLSSIATPREYVHMASTETGPHETAV
ADEKKADKRESSVSQTHGRAEEPTEEKQARRERFQKDQSTARDGRSVIED
KEEGRAERIEIGDGPEPGVGRGTSSSVETGLVKVNAGARGITYDALVQVG
KLMGNMIGGDANEVGARAAVASLLKISTPEGGSSGGKGASCQEEDGAGGQ
RYWGERWSKTLSGSVDMAVPPPPVAMAWSHLAQRWKRSVSCREPPMSLAA
FLELGNEENTKERCQGPHGKGMVERKRVSCLIEQILRCPETPPGGLWAAC
LDQFVARHAATAPAGSDGFRGCNSSSVDASRSGREWEGADMPVAGVATGS
CSQDAAAIIQEVSLTLMEYVPGLLGPSMEACEDAFVAVETEIMTTLYPSV
LGECQEQARSRSSALEGWYLREPDAREERGMDGAGAQNEDPFHRAVQELV
GMSQEVTGRKKVARVLQSCLALGEGRVVTSADDLLPALAGVVRSARIPAL
PAHLAFIDQTCDTGALLGAEGYALTSLQVVVSLIVTPPGEMSGTMSDDEF
D back to topmRNA from alignment at CM002468.1:509566..512082- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6436 ID=rna6436|Name=rna6436|organism=Nannochloropsis gaditana|type=mRNA|length=2517bp|location=Sequence derived from alignment at CM002468.1:509566..512082- (Nannochloropsis gaditana)
AATGCAGGCCGTATAATCTAGAGTTTATAAATTTTCAATCCCATACGCGA
AAGGACAGGGTCTGTCGCCTGAGCATACGTAGAAAAGCATGCCGCCAGAA
CGAGACTCCTTCGTGATGGTCCGACTCCTAGTCGACGCGCAATTGGAATA
ATATGTGGCGACGAGCTCGAGATGCTGACGGGAAGAACGGCGTAGCGGTG
GACCGTCGGACTTGTAATAATATATCTATGCGTCACGAAAAACATGAACC
CTCAGCTGCAGAGGAAAGGGCAGAGGAAGAGGTCTTGCTGGCGCTGCGGA
TGATGTGCCAGTCCGGTCTGCGGCACCCGTTGCACGGGCATTCGTACGCA
CGCTATCGAGCTCTGCGGCCGCGCGTCTGTTTTTCTTGCGAGGCTCCTGT
ATTTGGACCCTTCTCTGTTGCCTGTCACTGCCTCTTATGTGGCATCATTG
TGCACCGACAGTGCGTCATGCGCATTACTAAGGTGCCGTGCGGAAACTAC
CGTGGTCTCCACGACCCTAGTGGCCTCCTCAGTAGCATTGCCACCCCCAG
AGAATATGTACACATGGCAAGCACGGAGACAGGTCCCCATGAGACAGCAG
TAGCGGATGAGAAGAAGGCTGATAAGAGGGAGTCAAGTGTTTCGCAAACA
CACGGTCGCGCAGAAGAACCGACGGAGGAGAAGCAGGCACGACGAGAGCG
TTTCCAAAAGGATCAATCCACTGCTCGTGATGGACGTTCTGTGATCGAAG
ACAAGGAAGAGGGAAGAGCAGAGCGGATAGAGATCGGGGACGGGCCTGAG
CCTGGGGTTGGAAGAGGGACGAGTAGCTCGGTCGAAACCGGTTTGGTCAA
AGTCAATGCCGGTGCGCGTGGCATCACTTACGACGCCCTCGTGCAGGTGG
GAAAATTGATGGGAAACATGATCGGTGGTGATGCCAACGAGGTCGGAGCG
CGGGCAGCTGTCGCAAGCCTTCTAAAGATCTCGACGCCCGAGGGAGGGTC
CTCGGGGGGGAAGGGCGCGAGCTGCCAGGAAGAGGATGGGGCCGGAGGGC
AGAGGTACTGGGGTGAAAGATGGTCGAAGACTTTGAGCGGGAGCGTGGAT
ATGGCAGTCCCGCCACCACCTGTGGCCATGGCGTGGTCCCACCTGGCGCA
ACGGTGGAAGAGGTCCGTGAGCTGCCGAGAACCGCCGATGAGCCTGGCCG
CCTTCCTGGAGCTAGGAAACGAAGAAAACACAAAAGAGCGCTGTCAAGGT
CCTCATGGGAAGGGAATGGTAGAAAGGAAGCGCGTGTCGTGTCTTATAGA
ACAGATTTTGCGCTGTCCCGAGACGCCCCCGGGGGGGCTATGGGCCGCCT
GTCTTGATCAATTTGTTGCGCGGCATGCGGCCACGGCGCCCGCAGGCTCG
GATGGTTTTCGGGGCTGTAATTCTTCATCCGTTGATGCGTCGCGCAGTGG
CAGGGAATGGGAGGGAGCCGACATGCCGGTGGCGGGTGTGGCTACAGGAT
CCTGCTCCCAGGACGCGGCCGCCATCATCCAGGAGGTGTCGCTCACACTG
ATGGAGTACGTGCCCGGACTCCTGGGTCCGTCTATGGAAGCCTGCGAGGA
CGCCTTTGTGGCCGTGGAGACGGAGATAATGACCACGCTCTACCCCTCCG
TGCTGGGAGAGTGCCAGGAGCAGGCCCGGTCTCGGAGCAGCGCCCTCGAA
GGCTGGTACCTGCGGGAGCCAGACGCGCGGGAGGAGCGAGGAATGGATGG
TGCGGGGGCCCAAAATGAGGATCCGTTCCACCGGGCGGTTCAGGAGCTCG
TGGGGATGAGCCAGGAGGTGACAGGCCGTAAGAAGGTTGCGCGAGTGCTG
CAGAGCTGTTTGGCTCTGGGAGAGGGGCGCGTGGTCACGAGCGCGGATGA
TCTCCTACCGGCCTTGGCGGGTGTTGTGCGGTCGGCGCGGATACCTGCCT
TGCCCGCCCATTTGGCCTTCATCGACCAGACCTGCGACACTGGGGCTCTG
CTCGGCGCCGAGGGCTATGCCTTGACGTCGCTGCAGGTTTGTAGAGGGGT
AACAGAGTGAGAAGGGGCACTGTAATTGAGGGAGTGCTCAATGCTTTGGG
TTTGATAGCCCTGACTGTCGCGGCGAGGTGGGAAGGAACTCCGACTGATT
ACGCTCCGATCTGCTTTCCCCCTTCAGGTCGTTGTCAGCCTCATCGTCAC
GCCGCCAGGCGAGATGTCGGGGACAATGTCGGACGACGAATTCGACTAGG
GGTGGATAAGAAAGAGTAGAAAACAGATCCTTGCTCAGGGTGCTTCACAC
CGCTACAAAGTTTCTCTAGCGATGCACCTCTTGTATGAAACGTAATATTT
TGTAGTTTTTTCAACCTGCTGTGAAATAGAGTCTGTAGACAACACTTTGA
AATCAAAGTAAACCACCCATTCATTTGAGCGTGTCGGGCAACCTGCGGCT
TGGGGCTTAATTGATACTTTTCTTCTGTGCACGAGACAGAGATTTGAAAC
CTCTTGAGGGAATTCCT back to topCoding sequence (CDS) from alignment at CM002468.1:509566..512082- >rna6436 ID=rna6436|Name=rna6436|organism=Nannochloropsis gaditana|type=CDS|length=3912bp|location=Sequence derived from alignment at CM002468.1:509566..512082- (Nannochloropsis gaditana)
GTCGTTGTCAGCCTCATCGTCACGCCGCCAGGCGAGATGTCGGGGACAAT
GTCGGACGACGAATTCGACTAGATGTGGCGACGAGCTCGAGATGCTGACG
GGAAGAACGGCGTAGCGGTGGACCGTCGGACTTGTAATAATATATCTATG
CGTCACGAAAAACATGAACCCTCAGCTGCAGAGGAAAGGGCAGAGGAAGA
GGTCTTGCTGGCGCTGCGGATGATGTGCCAGTCCGGTCTGCGGCACCCGT
TGCACGGGCATTCGTACGCACGCTATCGAGCTCTGCGGCCGCGCGTCTGT
TTTTCTTGCGAGGCTCCTGTATTTGGACCCTTCTCTGTTGCCTGTCACTG
CCTCTTATGTGGCATCATTGTGCACCGACAGTGCGTCATGCGCATTACTA
AGGTGCCGTGCGGAAACTACCGTGGTCTCCACGACCCTAGTGGCCTCCTC
AGTAGCATTGCCACCCCCAGAGAATATGTACACATGGCAAGCACGGAGAC
AGGTCCCCATGAGACAGCAGTAGCGGATGAGAAGAAGGCTGATAAGAGGG
AGTCAAGTGTTTCGCAAACACACGGTCGCGCAGAAGAACCGACGGAGGAG
AAGCAGGCACGACGAGAGCGTTTCCAAAAGGATCAATCCACTGCTCGTGA
TGGACGTTCTGTGATCGAAGACAAGGAAGAGGGAAGAGCAGAGCGGATAG
AGATCGGGGACGGGCCTGAGCCTGGGGTTGGAAGAGGGACGAGTAGCTCG
GTCGAAACCGGTTTGGTCAAAGTCAATGCCGGTGCGCGTGGCATCACTTA
CGACGCCCTCGTGCAGGTGGGAAAATTGATGGGAAACATGATCGGTGGTG
ATGCCAACGAGGTCGGAGCGCGGGCAGCTGTCGCAAGCCTTCTAAAGATC
TCGACGCCCGAGGGAGGGTCCTCGGGGGGGAAGGGCGCGAGCTGCCAGGA
AGAGGATGGGGCCGGAGGGCAGAGGTACTGGGGTGAAAGATGGTCGAAGA
CTTTGAGCGGGAGCGTGGATATGGCAGTCCCGCCACCACCTGTGGCCATG
GCGTGGTCCCACCTGGCGCAACGGTGGAAGAGGTCCGTGAGCTGCCGAGA
ACCGCCGATGAGCCTGGCCGCCTTCCTGGAGCTAGGAAACGAAGAAAACA
CAAAAGAGCGCTGTCAAGGTCCTCATGGGAAGGGAATGGTAGAAAGGAAG
CGCGTGTCGTGTCTTATAGAACAGATTTTGCGCTGTCCCGAGACGCCCCC
GGGGGGGCTATGGGCCGCCTGTCTTGATCAATTTGTTGCGCGGCATGCGG
CCACGGCGCCCGCAGGCTCGGATGGTTTTCGGGGCTGTAATTCTTCATCC
GTTGATGCGTCGCGCAGTGGCAGGGAATGGGAGGGAGCCGACATGCCGGT
GGCGGGTGTGGCTACAGGATCCTGCTCCCAGGACGCGGCCGCCATCATCC
AGGAGGTGTCGCTCACACTGATGGAGTACGTGCCCGGACTCCTGGGTCCG
TCTATGGAAGCCTGCGAGGACGCCTTTGTGGCCGTGGAGACGGAGATAAT
GACCACGCTCTACCCCTCCGTGCTGGGAGAGTGCCAGGAGCAGGCCCGGT
CTCGGAGCAGCGCCCTCGAAGGCTGGTACCTGCGGGAGCCAGACGCGCGG
GAGGAGCGAGGAATGGATGGTGCGGGGGCCCAAAATGAGGATCCGTTCCA
CCGGGCGGTTCAGGAGCTCGTGGGGATGAGCCAGGAGGTGACAGGCCGTA
AGAAGGTTGCGCGAGTGCTGCAGAGCTGTTTGGCTCTGGGAGAGGGGCGC
GTGGTCACGAGCGCGGATGATCTCCTACCGGCCTTGGCGGGTGTTGTGCG
GTCGGCGCGGATACCTGCCTTGCCCGCCCATTTGGCCTTCATCGACCAGA
CCTGCGACACTGGGGCTCTGCTCGGCGCCGAGGGCTATGCCTTGACGTCG
CTGCAGGTCGTTGTCAGCCTCATCGTCACGCCGCCAGGCGAGATGTCGGG
GACAATGTCGGACGACGAATTCGACTAGATGTGGCGACGAGCTCGAGATG
CTGACGGGAAGAACGGCGTAGCGGTGGACCGTCGGACTTGTAATAATATA
TCTATGCGTCACGAAAAACATGAACCCTCAGCTGCAGAGGAAAGGGCAGA
GGAAGAGGTCTTGCTGGCGCTGCGGATGATGTGCCAGTCCGGTCTGCGGC
ACCCGTTGCACGGGCATTCGTACGCACGCTATCGAGCTCTGCGGCCGCGC
GTCTGTTTTTCTTGCGAGGCTCCTGTATTTGGACCCTTCTCTGTTGCCTG
TCACTGCCTCTTATGTGGCATCATTGTGCACCGACAGTGCGTCATGCGCA
TTACTAAGGTGCCGTGCGGAAACTACCGTGGTCTCCACGACCCTAGTGGC
CTCCTCAGTAGCATTGCCACCCCCAGAGAATATGTACACATGGCAAGCAC
GGAGACAGGTCCCCATGAGACAGCAGTAGCGGATGAGAAGAAGGCTGATA
AGAGGGAGTCAAGTGTTTCGCAAACACACGGTCGCGCAGAAGAACCGACG
GAGGAGAAGCAGGCACGACGAGAGCGTTTCCAAAAGGATCAATCCACTGC
TCGTGATGGACGTTCTGTGATCGAAGACAAGGAAGAGGGAAGAGCAGAGC
GGATAGAGATCGGGGACGGGCCTGAGCCTGGGGTTGGAAGAGGGACGAGT
AGCTCGGTCGAAACCGGTTTGGTCAAAGTCAATGCCGGTGCGCGTGGCAT
CACTTACGACGCCCTCGTGCAGGTGGGAAAATTGATGGGAAACATGATCG
GTGGTGATGCCAACGAGGTCGGAGCGCGGGCAGCTGTCGCAAGCCTTCTA
AAGATCTCGACGCCCGAGGGAGGGTCCTCGGGGGGGAAGGGCGCGAGCTG
CCAGGAAGAGGATGGGGCCGGAGGGCAGAGGTACTGGGGTGAAAGATGGT
CGAAGACTTTGAGCGGGAGCGTGGATATGGCAGTCCCGCCACCACCTGTG
GCCATGGCGTGGTCCCACCTGGCGCAACGGTGGAAGAGGTCCGTGAGCTG
CCGAGAACCGCCGATGAGCCTGGCCGCCTTCCTGGAGCTAGGAAACGAAG
AAAACACAAAAGAGCGCTGTCAAGGTCCTCATGGGAAGGGAATGGTAGAA
AGGAAGCGCGTGTCGTGTCTTATAGAACAGATTTTGCGCTGTCCCGAGAC
GCCCCCGGGGGGGCTATGGGCCGCCTGTCTTGATCAATTTGTTGCGCGGC
ATGCGGCCACGGCGCCCGCAGGCTCGGATGGTTTTCGGGGCTGTAATTCT
TCATCCGTTGATGCGTCGCGCAGTGGCAGGGAATGGGAGGGAGCCGACAT
GCCGGTGGCGGGTGTGGCTACAGGATCCTGCTCCCAGGACGCGGCCGCCA
TCATCCAGGAGGTGTCGCTCACACTGATGGAGTACGTGCCCGGACTCCTG
GGTCCGTCTATGGAAGCCTGCGAGGACGCCTTTGTGGCCGTGGAGACGGA
GATAATGACCACGCTCTACCCCTCCGTGCTGGGAGAGTGCCAGGAGCAGG
CCCGGTCTCGGAGCAGCGCCCTCGAAGGCTGGTACCTGCGGGAGCCAGAC
GCGCGGGAGGAGCGAGGAATGGATGGTGCGGGGGCCCAAAATGAGGATCC
GTTCCACCGGGCGGTTCAGGAGCTCGTGGGGATGAGCCAGGAGGTGACAG
GCCGTAAGAAGGTTGCGCGAGTGCTGCAGAGCTGTTTGGCTCTGGGAGAG
GGGCGCGTGGTCACGAGCGCGGATGATCTCCTACCGGCCTTGGCGGGTGT
TGTGCGGTCGGCGCGGATACCTGCCTTGCCCGCCCATTTGGCCTTCATCG
ACCAGACCTGCGACACTGGGGCTCTGCTCGGCGCCGAGGGCTATGCCTTG
ACGTCGCTGCAG back to top
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