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Properties
| Property Name | Value |
|---|
| Product | aspartate carbamoyltransferase |
| Orig transcript id | gnl|cribi|Naga_100020g58.5404.mrna |
| Orig protein id | gnl|cribi|Naga_100020g58.5404 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:479969..482411 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6423 ID=rna6423|Name=rna6423|organism=Nannochloropsis gaditana|type=mRNA|length=237bp
ATGTACTTCCATATAGACGAGATTATAACAAACCAAGCAATGCTGCGATA
CTCTACAGTCATGGGTAAAGTTTTAAAAAAAAGTACTTACTTTTTTCATC
GAGAAGGCATTCCTACCGCTCGTGAGGGACATAAATGTATGAGTGAAGGA
AATCTACATCGTTCGAACAACATTAATTTGACGCTATGGTTGTTTACGAG
GCAGGTTCACATGATCACATCTGTGATCATGCGCTAA back to topprotein sequence of rna6423 >rna6423-protein ID=rna6423-protein|Name=rna6423|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHG
GDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGE
TLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQ
SLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYV
SPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFP
RAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAY
FRQMENGMYARMALIALIMGVSGVSNH back to topmRNA from alignment at CM002468.1:479969..482411- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6423 ID=rna6423|Name=rna6423|organism=Nannochloropsis gaditana|type=mRNA|length=2443bp|location=Sequence derived from alignment at CM002468.1:479969..482411- (Nannochloropsis gaditana)
TAAACAACATTGAAAGCAGGTGCACGTAAGTCTCCTTATCTTGTATATAA
GGGTAGACGTGAGTCTTCCCATACCGTAAAGGAGACAAGATGTTACCACG
AAAAAAATACTCAGTTGTTTTCATAGCACTGCTCTTCTTCCACTCGCCAC
CTGCGAACTTTTAGCCGAAGCGATCTTTGTTTAACAAAACCCAGGAGCCC
AAGGGGAGTACTGGTGATCCAATAATTGGCACCGATGAGCGCCCATATCC
TCCTTCCAAACAAGCGAGAGACATTCTTGCAAACCCCCACCTTTCATTTG
ACAAGTCACCCTAACGATTCTGTTGATAGCAAGCCATCGAAGCTCGCCAC
CACAACCATCATCATCATCATCATCATCTTTTTCTTCTTCATCATCATCT
TCATCATCATCATGTACACCCGCACCATCAAACGACATAGATGACATTCC
AAACACCCCTCCGGGCTTACATTCTGATGGAAGTCTGGATGGATCTGCTT
TACAAAGGGACGTAGAAGCCGACGAAGCATTTAAACCTGCGTGTTGCAGG
ATTTGTCATTCAGTCATTCATGTACAAAGTGGCCAGCAGTATCGCAGCTC
GCCGCTTTTCCCTCCTGATTCTATAAATTAGCTTACCGCGATGACAGTCC
CACGACATGAGGCACTTACCACGGCTCCAATTAGGATTGATAGAGGCAGA
CAGCAAAAGAAGGAGATAATTACGTACGTGGAGCCTCAAAAAATGAAAAG
TAGCCTGTAAATGTAGGTGTTGACCTGATGGCAACCAATTGATAGTGAGA
GCATAAGATTTCTTAAAAGGCTATGGCAGCCTCGAGCATATAACCTCCTT
CCATTTCCCCGGGGGCGTCAAGATCACCGTCTCTACATGCTCAGGCCGGT
CACTTGCACTGTCAGACACACCGGGCACATGCTTGTTCGCATGTTGTCCG
TCCTCCATCTCTGTACGCCAAAGCATTTCTATCTACATTTAAAACTCAGA
CACGGAGAGATTAATCCGAAGAGCAGTCCCGGATGCGTGATATGGCGAGG
CGAGCCATAAAGTTTATGATCTTATCCCTCACGTTCTCGTTTTTCTTTTA
ATTCATCCGTGCTCAATACTTGAAAGAAAGCGTCTCATCCTCGACCATGA
CTCGAGACGACTGTACTGTGTTCAGTAGCGATCCACAATCCTGGGTTGGG
CAGCACTTCTTGTCAGCTACACAGATTACTTTACCGGCATTGGAGCTACT
TCTACGTGAGGCGGAGGCTATGAAAGAGCTTGTGAAAGTTCATGGCGGCG
ATCTACGGTTGCAAGGACGCGTTTTAGGAAGTATATTCTTCGAACCCTCA
ACACGGACGACGTCATCTTTCCAAGCGGCATTTCAACGGCTTGGGGGAAG
TTGCATACACGTGAATGAGTCCAGCTCCAGCGCGCAAAAAGGAGAGACTC
TAAGTGATACCGTGAGATCCATGGCATGCTATTGCGACGTTGTGGTCTTG
CGGCATCCTGTCCAGGGAAGCGTGCGCGAGGCTGCAATGACCTGCCCAAA
ACCTCTTCTGAACGCGGGCGATGGAACAGGAGAACATCCCACGCAATCAC
TGCTGGACCTCCTCACAGTGAAGCTGGAGGTCGGAGAGATAAGAAATAAG
ACAGTTGCCTTTGTAGGAGATTTAAAACATGGACGCACTGCGCATTCTTT
TGCGCGCTTGTTGTGTTTGTTTAGTGGCATCCGGCTGATCTATGTGAGCC
CCCAATCCTTGGCGATGCCGGAAGAAGTGAAGAAATATGTAGATAGCCGT
GGGATTCAACAGCATGAGTACTTTACGCTGGATGAAGACGTGCTCGCAAC
CATGGATGTGCTCTACATGACCAGGGTACAGAAAGAACGATTCCCGAGGG
CTGCGGACTACGAGAAAGTGAAGGACATCTTTCGTGTAACGCCTCAAACC
ATGCAACTATGTAAGAGCTCGCTAGTCTTGATGCACCCTCTCCCACGCGT
TGGAGAGATTGACGACCGAGTCGACCAAGATCCACGAGCCGCTTATTTCA
GGCAAATGGAAAATGGCATGTATGCACGCATGGCTCTGATCGCTTTGATA
ATGGGTGTATCGGGTGTTTCAAACCATTGACCGACGCATCCGCGAGAAAC
AAAGGAAAGTATTGAAATTCAAAATTTTAATTAGAGAGAAAAGGCTGCAC
CATGACATGATTTCTTTCCTCTTATGGATGGAAAGTCGGGGCCGCATGTC
GGCTTGCGGTGAGAATCGAGGAAGTCATTCTCCTCCATTCCCCCCCTTGG
CCATCAGCACTTTCCAATTAGCGCATGATCACAGATGTGATCATGTGAAC
CTGCCTCGTAAACAACCATAGCGTCAAATTAATGTTGTTCGAACGATGTA
GATTTCCTTCACTCATACATTTATGTCCCTCACGAGCGGTAGG back to topCoding sequence (CDS) from alignment at CM002468.1:479969..482411- >rna6423 ID=rna6423|Name=rna6423|organism=Nannochloropsis gaditana|type=CDS|length=984bp|location=Sequence derived from alignment at CM002468.1:479969..482411- (Nannochloropsis gaditana)
ATGACTCGAGACGACTGTACTGTGTTCAGTAGCGATCCACAATCCTGGGT
TGGGCAGCACTTCTTGTCAGCTACACAGATTACTTTACCGGCATTGGAGC
TACTTCTACGTGAGGCGGAGGCTATGAAAGAGCTTGTGAAAGTTCATGGC
GGCGATCTACGGTTGCAAGGACGCGTTTTAGGAAGTATATTCTTCGAACC
CTCAACACGGACGACGTCATCTTTCCAAGCGGCATTTCAACGGCTTGGGG
GAAGTTGCATACACGTGAATGAGTCCAGCTCCAGCGCGCAAAAAGGAGAG
ACTCTAAGTGATACCGTGAGATCCATGGCATGCTATTGCGACGTTGTGGT
CTTGCGGCATCCTGTCCAGGGAAGCGTGCGCGAGGCTGCAATGACCTGCC
CAAAACCTCTTCTGAACGCGGGCGATGGAACAGGAGAACATCCCACGCAA
TCACTGCTGGACCTCCTCACAGTGAAGCTGGAGGTCGGAGAGATAAGAAA
TAAGACAGTTGCCTTTGTAGGAGATTTAAAACATGGACGCACTGCGCATT
CTTTTGCGCGCTTGTTGTGTTTGTTTAGTGGCATCCGGCTGATCTATGTG
AGCCCCCAATCCTTGGCGATGCCGGAAGAAGTGAAGAAATATGTAGATAG
CCGTGGGATTCAACAGCATGAGTACTTTACGCTGGATGAAGACGTGCTCG
CAACCATGGATGTGCTCTACATGACCAGGGTACAGAAAGAACGATTCCCG
AGGGCTGCGGACTACGAGAAAGTGAAGGACATCTTTCGTGTAACGCCTCA
AACCATGCAACTATGTAAGAGCTCGCTAGTCTTGATGCACCCTCTCCCAC
GCGTTGGAGAGATTGACGACCGAGTCGACCAAGATCCACGAGCCGCTTAT
TTCAGGCAAATGGAAAATGGCATGTATGCACGCATGGCTCTGATCGCTTT
GATAATGGGTGTATCGGGTGTTTCAAACCATTGA back to top
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