EWM24271.1, cds6407 (CDS) Nannochloropsis gaditana

Overview
NameEWM24271.1
Unique Namecds6407
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:480282..481265 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24271.1
Productaspartate carbamoyltransferase
Orig transcript idgnl|cribi|Naga_100020g58.5404.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:480282..481265 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006520cellular amino acid metabolic process
GO:0006207'de novo' pyrimidine nucleobase biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0016597amino acid binding
GO:0016743carboxyl- or carbamoyltransferase activity
GO:0004070aspartate carbamoyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR006131Asp_carbamoyltransf_Asp/Orn-bd
IPR006132Asp/Orn_carbamoyltranf_P-bd
IPR006130Asp/Orn_carbamoylTrfase
IPR002082Asp_carbamoyltransf
Homology
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|553194703|ref|XP_005856017.1| (aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|553196326|ref|XP_005856320.1| aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422292741|gb|EKU20043.1| aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422293043|gb|EKU20344.1| aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query:    1 MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH 327
            MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH
Sbjct:    9 MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH 335          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|585105662|gb|EWM24271.1| (aspartate carbamoyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query:    1 MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH 327
            MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH
Sbjct:    1 MTRDDCTVFSSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVSGVSNH 327          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|1214702914|gb|OWZ15019.1| (Aspartate carbamoyltransferase [Phytophthora megakarya])

HSP 1 Score: 356.681 bits (914), Expect = 1.001e-119
Identity = 172/309 (55.66%), Postives = 224/309 (72.49%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRN---KTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            +W G++ LS  Q    + + +L  A+ MK +VK  G    L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHPTQ++LDL T+  E+G+++N   K V  VGDLK+GRT HS ++LL ++ G    YVSP+SL MP  V   + ++GIQQHE   L E V+   DVLY+TRVQKERF   ADY  VKD FR+T  T++  K+ +++MHPLPRVGEI + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWAGENILSIAQFGTESAQRVLSVADEMKTMVKTQGASDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLQNLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GATFNYVSPESLQMPRYVYDELAAQGIQQHETTDL-ESVINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMIIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|675206907|ref|XP_008912338.1| (aspartate carbamoyltransferase [Phytophthora parasitica INRA-310] >gi|566014029|gb|ETI36940.1| aspartate carbamoyltransferase [Phytophthora parasitica P1569] >gi|567951430|gb|ETK77131.1| aspartate carbamoyltransferase [Phytophthora parasitica] >gi|568087430|gb|ETN02301.1| aspartate carbamoyltransferase [Phytophthora parasitica INRA-310] >gi|570941509|gb|ETP06766.1| aspartate carbamoyltransferase [Phytophthora parasitica CJ01A1] >gi|570971758|gb|ETP34873.1| aspartate carbamoyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 353.984 bits (907), Expect = 1.105e-118
Identity = 171/309 (55.34%), Postives = 225/309 (72.82%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRN---KTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            +W G++ LS  Q    + + +L  A+ MK++VK  G +  L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHPTQ++LDL T+  E+G++ N   K V  VGDLK+GRT HS ++LL ++ G    YVSP+SL MP  V   + ++GI+Q+E   L E V+   DVLY+TRVQKERF    DY  VKD FR+T  T++  KS++V+MHPLPRVGEI + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLENLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDL-ESVINQTDVLYVTRVQKERFENEGDYNAVKDSFRITLDTIKDAKSNMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|695394852|ref|XP_009521009.1| (hypothetical protein PHYSODRAFT_555428 [Phytophthora sojae] >gi|348685906|gb|EGZ25721.1| hypothetical protein PHYSODRAFT_555428 [Phytophthora sojae])

HSP 1 Score: 352.829 bits (904), Expect = 2.482e-118
Identity = 172/309 (55.66%), Postives = 223/309 (72.17%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRN---KTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            SW G++ LS  Q    + + +L  A+ MK +VK  G    L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHP+Q++LDL T+  E+G++ N   K V  VGDLK+GRT HS +RLL ++ G    YVSP+SL MP  V   + ++GIQQ+E   LD  V+   DVLY+TRVQKERF   ADY  VKD FR+T  T++  KS +++MHPLPRVGE+ + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   14 SWQGENILSIAQFGKQSAQRVLDVADEMKNMVKTQGASDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPSQAMLDLYTIHSELGDLENLKGKVVTMVGDLKYGRTVHSLSRLLAMY-GTTFNYVSPESLKMPRYVFDELAAQGIQQNETTDLDS-VINQTDVLYVTRVQKERFESEADYNAVKDSFRITLDTIKDAKSKMIIMHPLPRVGEVAEEVDTDPRAAYFRQMENGMYVRMALLALVLG 320          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|574587558|gb|AHG32307.1| (aspartate carbamoyltransferase [Phytophthora infestans])

HSP 1 Score: 352.443 bits (903), Expect = 3.836e-118
Identity = 170/309 (55.02%), Postives = 225/309 (72.82%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGE---IRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            +W G++ LS  Q    + + +L  A+ MK++VK  G +  L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHPTQ++LDL T+  E+G+   ++ K V  VGDLK+GRT HS ++LL ++ G    YVSP+SL MP  V   + ++GI+Q+E   LD  V+   DVLY+TRVQKERF   ADY  VKD FR+T  T++  K+ +V+MHPLPRVGEI + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLEKLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDLDS-VINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|567980122|gb|ETL30592.1| (aspartate carbamoyltransferase [Phytophthora parasitica] >gi|568009620|gb|ETL83820.1| aspartate carbamoyltransferase [Phytophthora parasitica] >gi|568039522|gb|ETM37013.1| aspartate carbamoyltransferase [Phytophthora parasitica] >gi|570317701|gb|ETO65649.1| aspartate carbamoyltransferase [Phytophthora parasitica P1976] >gi|970659451|gb|KUF97088.1| Aspartate carbamoyltransferase [Phytophthora nicotianae])

HSP 1 Score: 352.058 bits (902), Expect = 5.872e-118
Identity = 170/309 (55.02%), Postives = 224/309 (72.49%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRN---KTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            +W G++ LS  Q    + + +L  A+ MK++ K  G +  L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHPTQ++LDL T+  E+G++ N   K V  VGDLK+GRT HS ++LL ++ G    YVSP+SL MP  V   + ++GI+Q+E   L E V+   DVLY+TRVQKERF    DY  VKD FR+T  T++  KS++V+MHPLPRVGEI + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMAKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLENLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDL-ESVINQTDVLYVTRVQKERFENEGDYNAVKDSFRITLDTIKDAKSNMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|301111746|ref|XP_002904952.1| (aspartate carbamoyltransferase [Phytophthora infestans T30-4] >gi|262095282|gb|EEY53334.1| aspartate carbamoyltransferase [Phytophthora infestans T30-4])

HSP 1 Score: 350.903 bits (899), Expect = 1.674e-117
Identity = 169/309 (54.69%), Postives = 225/309 (72.82%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGE---IRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            +W G++ LS  Q    + + +L  A+ MK++VK  G +  L+G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY DVVVLRHP++GS   AA    KP+LNAGDG GEHPTQ++LDL T+  E+G+   ++ K V  VGDLK+GRT HS ++LL ++ G    YVSP+SL MP  V   + ++GI+Q+E   L+  V+   DVLY+TRVQKERF   ADY  VKD FR+T  T++  K+ +V+MHPLPRVGEI + VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLEKLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDLN-SVINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|813142309|ref|XP_012199248.1| (aspartate carbamoyltransferase [Saprolegnia parasitica CBS 223.65] >gi|641536171|gb|KDO30067.1| aspartate carbamoyltransferase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 345.895 bits (886), Expect = 1.482e-115
Identity = 173/310 (55.81%), Postives = 223/310 (71.94%), Query Frame = 0
Query:   15 SWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTV----KLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMG 320
            SW G+  LS  Q+    +  L + A+ MK++V   GGD  L+G+V+ ++FFEPSTRT+ SFQAA  RLGG+ + VNESSSS+QKGETLSDT+R + CY DV VLRHPV+G+   AA    KP+LNAGDG GEHPTQ+LLDL T+    KL    +  K +  VGDLK+GRT HS A+LL  F+ + L YVSP+SL MP+ +   +++ G++QHE   LD  VLA  DVLY+TRVQKERF  AA+Y+ VKD F +TP T+   K++++LMHPLPRV EI   VD DPRAAYFRQME GMY RMA++AL++G
Sbjct:   10 SWSGKDVLSTEQLYAANVRYLFQVADHMKDMVARQGGDDTLKGKVMANVFFEPSTRTSCSFQAAMLRLGGAVVCVNESSSSSQKGETLSDTMRCLECYADVTVLRHPVKGAAATAAAASRKPVLNAGDGVGEHPTQALLDLYTIYKEAKLSEMNLTGKVITMVGDLKNGRTVHSLAKLLAHFN-VTLNYVSPESLKMPQYIVDGLNAVGVKQHETTDLDS-VLAASDVLYITRVQKERFETAAEYDAVKDSFIITPATLTKAKATMILMHPLPRVNEIAVEVDADPRAAYFRQMEYGMYVRMAILALVLG 317          
BLAST of EWM24271.1 vs. NCBI_GenBank
Match: gi|325190104|emb|CCA24586.1| (unnamed protein product [Albugo laibachii Nc14])

HSP 1 Score: 345.51 bits (885), Expect = 1.955e-115
Identity = 170/311 (54.66%), Postives = 223/311 (71.70%), Query Frame = 0
Query:   14 QSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVG--EIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGVS 322
            + W     LS     + ++  +L+ A+ MKE+V   G    L+G++L ++F+EPSTRT  SFQAA  RLGG+ I VNES+SSAQKGE L DT+R + CY DV+VLRHP +GS   AA    KPL+NAGDG GEHPTQ+LLDL T+  E+G  ++  K V  VGDLK+GRT HS A+LL LF  +++ Y+SP +L MP E+ + ++  GI+QHE   L E V+   DVLY+TRVQKERF  A +YE VK+ F++T  T+Q  KSSL++MHPLPRVGEI + VDQDPRAAYF QM+NGMY RMAL+AL++GV+
Sbjct:    5 EPWAISKILSIKDFDIASILRILKVADEMKEIVTKQGSCQLLKGKILANVFYEPSTRTNCSFQAAMLRLGGAVIPVNESTSSAQKGEILGDTIRCLECYADVIVLRHPERGSAAVAAAATSKPLINAGDGIGEHPTQALLDLFTIYNELGTTDLAGKIVTMVGDLKNGRTVHSLAKLLALFK-VKIYYISPDTLKMPREIIQSLNDSGIEQHESNDL-EPVMNITDVLYVTRVQKERFASAQEYEAVKNNFKITLLTIQNAKSSLIIMHPLPRVGEIAEEVDQDPRAAYFGQMKNGMYVRMALLALVLGVA 313          
The following BLAST results are available for this feature:
BLAST of EWM24271.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553194703|ref|XP_005856017.1|0.000e+0100.00aspartate carbamoyltransferase catalytic subunit, ... [more]
gi|585105662|gb|EWM24271.1|0.000e+0100.00aspartate carbamoyltransferase [Nannochloropsis ga... [more]
gi|1214702914|gb|OWZ15019.1|1.001e-11955.66Aspartate carbamoyltransferase [Phytophthora megak... [more]
gi|675206907|ref|XP_008912338.1|1.105e-11855.34aspartate carbamoyltransferase [Phytophthora paras... [more]
gi|695394852|ref|XP_009521009.1|2.482e-11855.66hypothetical protein PHYSODRAFT_555428 [Phytophtho... [more]
gi|574587558|gb|AHG32307.1|3.836e-11855.02aspartate carbamoyltransferase [Phytophthora infes... [more]
gi|567980122|gb|ETL30592.1|5.872e-11855.02aspartate carbamoyltransferase [Phytophthora paras... [more]
gi|301111746|ref|XP_002904952.1|1.674e-11754.69aspartate carbamoyltransferase [Phytophthora infes... [more]
gi|813142309|ref|XP_012199248.1|1.482e-11555.81aspartate carbamoyltransferase [Saprolegnia parasi... [more]
gi|325190104|emb|CCA24586.1|1.955e-11554.66unnamed protein product [Albugo laibachii Nc14][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6423rna6423Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications