|
|
Properties
| Property Name | Value |
|---|
| Product | cation-transporting p-type atpase |
| Orig transcript id | gnl|cribi|Naga_100718g4.10596.mrna |
| Orig protein id | gnl|cribi|Naga_100718g4.10596 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:67486..68573 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna641 ID=rna641|Name=rna641|organism=Nannochloropsis gaditana|type=mRNA|length=1693bp
TTGCGATGTATCAAACCATATACGTCGTTGCCTCGCTTTTCTTCTCGTCT
GGCAGCGTTTCCTCTCGCTCTTGATGTTGCTTTTTGTTCTACATGTCCGT
TATCCATCCAACAGTGTTGATACCGGCGCAACAGTAAGCATGCTACTCTA
TTTCTCGTGTCAGAAAGCTAGCTAGTACCTGTACAGATCGTCATTCTCGG
AGGGAGCTGTTCACAATGCGCTTTCAGGAAGGAGGTAAACTGGCATGTCT
GTTCCTCACATTCTACTTTTCTATGCACCTTTACAGGGCCGTCGTCTCTC
CGGAATGCCTCCGCACCACAAGACAAGGATAAAAGGGGTCATTTTATCTA
GTTTGGTGTCGTCTTGTGTCTTGTTCCTCACCAGTATCACCTGTCAAGCC
GCTGCGCGCCTGGCCAATACCAAGCAGCAGAATTCCAGCTTTTACAATGA
AACCGCTGTCAGGGTGATGCTCGACTATGCTGCAGCAGCCTATTACTGCA
GAACTAGCGCGTGTGAAGCGTGGGCATGCAGTGCCTGCTCCCGGCACCCG
CGCACGGAGGTCAGGCGCGTGTACGACAACGTTCACAATGGAAATGGCTT
CGTGGGTTGGGATCCTGTGGAAGGGGTCGTTGTGGTGTCCTTCGCGGGTA
CCGACACGACCAGCGTGGCGAACTGGATCGACGATTTGGACGAGGTGAAG
ACGCCCTGGCCCCTGGAGGGCTGCCAGGAGTGCAAGGTTCACGCGGGGTT
CCTGACTACGTACTCGGCGCTGCGACCGCAGCTACAGCCTCTGGTCGAAG
CCCTCGTGAGGGACCATCCCCAGGCGCCGGTCTGGGTCACGGGCCACTCT
CTGGGGGCGGCCTTGGCAGTCCTGTGCATGGTCGACCTCCTTTCTCTTTC
GTACCCTGTCCGGGCCGTCGTCAACTTCGGGCAACCGCGCGTGGGGAATC
AGCATTTCTCCTCCTTCGTGGCTGCCCAATCTGCCTCCCTCTCCCTCTGC
TTCTACCGCCTCGTTCATCATCGCGATCCAGTGCCTCACCTGCCTCCTGC
CTCTTTCGGCTTCCACCATTCCCCCTTCGAAGTCTTCTATACGAAGAATG
AGACCTACTACCACATTTGCGACGCCACGGGCGAGGACAAGCACTGCTCG
GACCACTACCTGATCGATCCCAGCATCAAAGATCACCTCAATTATCTCGG
AGTTCTTTTTGGGGGGGAAGAGGTGGAGGGGCGCTTGCAGGAGTTGATGC
ATTCGACGGGGTGGGAGATGGAAGCCTCCGTGCTTGTGAGCGCGTCTTAA
ACAGAGAGAAGGCGGTAGACCGTGACAAAAAGGAGGATAGGGAGCGAGAA
AGGGGATGAGAGGAAAGGAAGAAAGCCGCGTAAGATGGTGAGGGACTCGA
GGTGGAGTGCGCGGAGGGAAAAGAGCTTTGATGGACGCCATCGTCTTAAA
GCACGTAGAGGCAAACAGAGGTGCAAGTACTGTTGTGAATTTTTAAAAGG
GGAATGTATACAAGCAAAGTAGGGTTTGATGTGGATATGGGAAGAGAACA
AATAATCCCTTCGGGCAGGAGAGGCGATGGCCAAGAGACATAGGCTCCCC
ACACTGTACAGATCAAGGAGGGGCAGATACACCTTACATTAAAGGAGATC
GTGAGAAAGCAAAGCAAGTGGTAGCGAAGAGAAGGATTTTGCG back to topprotein sequence of rna641 >rna641-protein ID=rna641-protein|Name=rna641|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDL
AKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFL
LAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRE
LLHAIAGGGISLLAIVLLAGWGGRGGRGGTTSRRTRSIGSHCISTAGSSG
MYSLPGNSAPSISPSSLKAWPPILPSWSGQGRCSVSSSSSSSSPPSPRPW
ESYLYPQGSGAVCSSSP back to topmRNA from alignment at CM002456.1:67486..68573- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna641 ID=rna641|Name=rna641|organism=Nannochloropsis gaditana|type=mRNA|length=1088bp|location=Sequence derived from alignment at CM002456.1:67486..68573- (Nannochloropsis gaditana)
ATGCACAGAAGGAAGCCTCAAGCTGCCTCCTCCGGCTGGCAATCGATATC
TCTTGGCACTCATCGTTTGTATCCTCTCTTCCCTCCGCCCTTCCTCGCCT
CCTGCCTTCCTCCCCCCCCTCCCCCTGCTCTTCCTAGGAGCGTGGACCTG
GCCAAGGCCGCCGCCGGCATTGTGGTAGCTCCTGAGGACTTCACGGCGCT
GGTCGAGACCTTGAGGGAGGGCCGGAGGCTCCACGCCAATTTCCGCAAGG
CCCTAGCCTTCTACCTGGGCGCCAAGGCCGCCCTCCTCCTCATCTTCCTC
CTCGCCCCTTTCCCCCTCTCCCCCATGCAGATCATCCTCCTTGAGCTCTT
CATGGACGTGGGCGCCTCCGTCACCTTCACCCTGGAGCCGGCAGACGGCG
ACCTGATGCTTCGCCCCCCCCACGGCCTCTCCCCGTTCTTTGACCGGGAG
CTCCTCCACGCCATTGCCGGCGGAGGGATCTCCCTTCTGGCCATCGTCCT
GCTGGCTGGGTGGGGAGGACGGGGGGGGCGGGGGGGAACGACCTCAAGGC
GCACGAGGAGTATCGGCAGTCATTGTATTTCAACGGCTGGCTCCTCGGGC
ATGTATTCCTTGCCTGGCAACTCCGCTCCCTCCATCAGCCCCTCCTCCTT
AAAGGCTTGGCCTCCAATCCTGCCTTCCTGGTCTGGGCAGGGGCGGTGCT
CGGTCTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCTCGCCAAGACCTTGG
GAGTCGTACCTCTACCCCCAAGGGAGTGGGGCCGTCTGTTCCTCCTCTCC
TTGATCGGGACCGGGTGGATGGAGGGATGGAAGCTGTTTCGTTGGTATGG
TGGGGACGGCGGGAGGGTGAGGCAGGCGAGGAGTCTAGCGCGCTTACACC
AAGGAAGCGAGAAGACAGTAACGAGGGAGGGGGCGGGAAGGATTGTGGAG
GCAGAAGCCCGGGTGGTCGATGGGGAAGAGAGTCGTTTGTTAGGCTGAGG
CCCTCAAGATGTGGCGGAGGAAGAGAACAAGAGGGAGGTGAGGGTGGGAA
AAGGAAGATTCGGACACAAGTAACGGTGTATATTCGGC back to topCoding sequence (CDS) from alignment at CM002456.1:67486..68573- >rna641 ID=rna641|Name=rna641|organism=Nannochloropsis gaditana|type=CDS|length=804bp|location=Sequence derived from alignment at CM002456.1:67486..68573- (Nannochloropsis gaditana)
ATGCACAGAAGGAAGCCTCAAGCTGCCTCCTCCGGCTGGCAATCGATATC
TCTTGGCACTCATCGTTTGTATCCTCTCTTCCCTCCGCCCTTCCTCGCCT
CCTGCCTTCCTCCCCCCCCTCCCCCTGCTCTTCCTAGGAGCGTGGACCTG
GCCAAGGCCGCCGCCGGCATTGTGGTAGCTCCTGAGGACTTCACGGCGCT
GGTCGAGACCTTGAGGGAGGGCCGGAGGCTCCACGCCAATTTCCGCAAGG
CCCTAGCCTTCTACCTGGGCGCCAAGGCCGCCCTCCTCCTCATCTTCCTC
CTCGCCCCTTTCCCCCTCTCCCCCATGCAGATCATCCTCCTTGAGCTCTT
CATGGACGTGGGCGCCTCCGTCACCTTCACCCTGGAGCCGGCAGACGGCG
ACCTGATGCTTCGCCCCCCCCACGGCCTCTCCCCGTTCTTTGACCGGGAG
CTCCTCCACGCCATTGCCGGCGGAGGGATCTCCCTTCTGGCCATCGTCCT
GCTGGCTGGGTGGGGAGGACGGGGGGGGCGGGGGGGAACGACCTCAAGGC
GCACGAGGAGTATCGGCAGTCATTGTATTTCAACGGCTGGCTCCTCGGGC
ATGTATTCCTTGCCTGGCAACTCCGCTCCCTCCATCAGCCCCTCCTCCTT
AAAGGCTTGGCCTCCAATCCTGCCTTCCTGGTCTGGGCAGGGGCGGTGCT
CGGTCTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCTCGCCAAGACCTTGG
GAGTCGTACCTCTACCCCCAAGGGAGTGGGGCCGTCTGTTCCTCCTCTCC
TTGA back to top
|