EWM30032.1, cds641 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|585112659|gb|EWM30032.1| (cation-transporting p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 Query: 1 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWGGRGGRGGTTSRRTRSIGSHCISTAGSSGMYSLPGNSAPSISPSSLKAWPPILPSWSGQGRCSVSSSSSSSSPPSPRPWESYLYPQGSGAVCSSSP 267 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWGGRGGRGGTTSRRTRSIGSHCISTAGSSGMYSLPGNSAPSISPSSLKAWPPILPSWSGQGRCSVSSSSSSSSPPSPRPWESYLYPQGSGAVCSSSP Sbjct: 1 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWGGRGGRGGTTSRRTRSIGSHCISTAGSSGMYSLPGNSAPSISPSSLKAWPPILPSWSGQGRCSVSSSSSSSSPPSPRPWESYLYPQGSGAVCSSSP 267
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|553179125|ref|XP_005852652.1| (p-type had subfamily ic [Nannochloropsis gaditana CCMP526] >gi|422295880|gb|EKU23179.1| p-type had subfamily ic [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.495 bits (859), Expect = 2.809e-114 Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0 Query: 1 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWG 172 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLL+FLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWG Sbjct: 1 MHRRKPQAASSGWQSISLGTHRLYPLFPPPFLASCLPPPPPPALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLLFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVLLAGWG 172
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|168045566|ref|XP_001775248.1| (predicted protein [Physcomitrella patens] >gi|162673461|gb|EDQ59984.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 119.398 bits (298), Expect = 7.436e-27 Identity = 62/129 (48.06%), Postives = 88/129 (68.22%), Query Frame = 0 Query: 43 ALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLAP-FPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPP-HGLSPFFDRELLHAIAGGGISLLAIVLLA 169 A+ + D+A+ AA IV ++F + L EGRRL AN RKALAFYLGAK L+++F++ FPLS +QII+LELFMD+GAS +F +EPAD D+M RPP FF+RE++ I + ++ VL++ Sbjct: 566 AMGKGTDVAREAASIVFVDDNFAMVPFALAEGRRLLANLRKALAFYLGAKIGLIMLFIIGTFFPLSAIQIIVLELFMDLGASTSFVMEPADTDIMRRPPLDSTKRFFNREIVGGILVSALCMIFTVLVS 694
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|290973595|ref|XP_002669533.1| (predicted protein [Naegleria gruberi] >gi|284083082|gb|EFC36789.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 116.701 bits (291), Expect = 7.810e-26 Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 0 Query: 43 ALPRSVDLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLL---------APF-PLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHGLSPFFDRELLHAIAGGGISLLAIVL 167 A+ VDLAK AA I++ ++F +V +REGRRL+AN RK+L FYL K L+++F+ PF PL PMQIILLELF D+GA+ TF LE + LM PP F D+ ++ I G ISL A V Sbjct: 602 AMRSGVDLAKEAAEIIIMDDNFATIVAGIREGRRLYANLRKSLQFYLSCKVTLVVLFVTNMIVGGSSAIPFIPLEPMQIILLELFSDIGAATTFVLEEEEETLMKNPPRTEKNFVDKSFIYHIIIGSISLFATVF 736
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|1028080832|ref|WP_063840215.1| (hypothetical protein [Alicycliphilus sp. B1]) HSP 1 Score: 115.931 bits (289), Expect = 1.228e-25 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLL-----IFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPH-GLSPFFDRELLHAIAGGGISLLAIVLL 168 D+A+ AA +V+A ++F +VE +R GR L+AN RKA+ +YL AK AL+ + L P P P+QIIL+ELFMD+GASVTF EP + D+M R P PF DR ++ I GG+SL A VL+ Sbjct: 653 DVAREAADLVLADDNFATVVEAVRTGRVLYANLRKAVRYYLAAKVALVFASLAAVLLKLPVPFDPVQIILMELFMDLGASVTFVAEPPENDVMARRPRDARQPFMDRSMVGGILFGGLSLGAAVLI 778
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|781563751|dbj|GAO22081.1| (ATPase [Alicycliphilus sp. B1]) HSP 1 Score: 115.931 bits (289), Expect = 1.407e-25 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLL-----IFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPH-GLSPFFDRELLHAIAGGGISLLAIVLL 168 D+A+ AA +V+A ++F +VE +R GR L+AN RKA+ +YL AK AL+ + L P P P+QIIL+ELFMD+GASVTF EP + D+M R P PF DR ++ I GG+SL A VL+ Sbjct: 630 DVAREAADLVLADDNFATVVEAVRTGRVLYANLRKAVRYYLAAKVALVFASLAAVLLKLPVPFDPVQIILMELFMDLGASVTFVAEPPENDVMARRPRDARQPFMDRSMVGGILFGGLSLGAAVLI 755
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|1175322479|ref|WP_081870272.1| (hypothetical protein [Lachnoclostridium phytofermentans]) HSP 1 Score: 108.612 bits (270), Expect = 3.990e-23 Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLLA-----PFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHG-LSPFFDRELLHAIAGGGISLLAIVL 167 D+AK AA +++ + FT++V+ ++EGRRL+ N K + +YL K L++ FL+ P P SP+QII+LELFMD+ AS +F EPA+ DL+ R P F ++ ++ I GGI+L A VL Sbjct: 599 DVAKEAADMILTNDSFTSIVDAIQEGRRLYDNLSKCVKYYLSCKVGLIISFLVPVLFNMPLPFSPIQIIILELFMDLAASTSFVAEPAESDLLKRKPRDPKESFMNKNMMTGIFSGGITLSAAVL 723
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|1174951919|ref|WP_081625138.1| (hypothetical protein [Hyphomicrobium denitrificans]) HSP 1 Score: 108.227 bits (269), Expect = 5.501e-23 Identity = 57/131 (43.51%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKA-----ALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHG-LSPFFDRELLHAIAGGGISLLAIVLLAGWGG 173 D+A+ AA +V+ + F LVE +REGRRL+ NFRKA+ +YL K + L P P +P+QI++LELFMD+GAS+ F +PA+ D+M RPP + FFD ++ + GG++L AIV + W G Sbjct: 633 DVARQAAQVVLTDDSFATLVEAVREGRRLYDNFRKAIRYYLAVKVALVLASAAAAILGLPLPFTPVQIVVLELFMDLGASLAFVGQPAEPDVMCRPPRDPDARFFDHGMVLGLLAGGVTLAAIVFASFWIG 763
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|484583705|gb|AGK59738.1| (cation-transporting ATPase [Hyphomicrobium denitrificans 1NES1]) HSP 1 Score: 108.227 bits (269), Expect = 5.713e-23 Identity = 57/131 (43.51%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKA-----ALLLIFLLAPFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHG-LSPFFDRELLHAIAGGGISLLAIVLLAGWGG 173 D+A+ AA +V+ + F LVE +REGRRL+ NFRKA+ +YL K + L P P +P+QI++LELFMD+GAS+ F +PA+ D+M RPP + FFD ++ + GG++L AIV + W G Sbjct: 632 DVARQAAQVVLTDDSFATLVEAVREGRRLYDNFRKAIRYYLAVKVALVLASAAAAILGLPLPFTPVQIVVLELFMDLGASLAFVGQPAEPDVMCRPPRDPDARFFDHGMVLGLLAGGVTLAAIVFASFWIG 762
BLAST of EWM30032.1 vs. NCBI_GenBank
Match: gi|1101132012|gb|OIO88795.1| (hypothetical protein AUK32_00595 [Actinobacteria bacterium CG2_30_50_142]) HSP 1 Score: 100.908 bits (250), Expect = 5.197e-22 Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 0 Query: 49 DLAKAAAGIVVAPEDFTALVETLREGRRLHANFRKALAFYLGAKAALLLIFLL-----APFPLSPMQIILLELFMDVGASVTFTLEPADGDLMLRPPHG-LSPFFDRELLHAIAGGGISLLAIV 166 D+A+ AA +++ +DF+ + ++ GRR++ N RK + +YL K L+ IFLL P P +P+QII+LELFMD+GAS F EP + DLM +PP F DR +L I G ISL V Sbjct: 7 DVAREAADMILTNDDFSTIAFAVQSGRRMYDNLRKGVRYYLAVKLGLMSIFLLPVLLGIPLPFAPIQIIVLELFMDLGASAAFVAEPGEKDLMTQPPRNPNQRFMDRPMLRTIVLGAISLFLAV 130 The following BLAST results are available for this feature:
BLAST of EWM30032.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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