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Properties
| Property Name | Value |
|---|
| Product | ferredoxin (2fe-2s) |
| Orig transcript id | gnl|cribi|Naga_100047g16.6079.mrna |
| Orig protein id | gnl|cribi|Naga_100047g16.6079 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:375639..376461 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6374 ID=rna6374|Name=rna6374|organism=Nannochloropsis gaditana|type=mRNA|length=1381bp
CCCCCCCGCGCTACCAAGCGTCCCGATCCTCTCCGAGGCCCATCTCGGGT
CCAACAGACAATATTTTGCCCTTATCTCACATTAAATAAAAAAAAGTCAA
TCAATCCTCGAAGCGATGCGTTTAAAATGTACTCATATGTTAACCGTTGT
TGACACGTTCTATGCAGAGAGGGGAAATTATCTTTAACTCGGATGAAGCT
CCCACTGAAATATGATGCTCCTGTGATGGCGATTGTCTTGAAGACGATTA
TGTGGCTTTTGGTCTTACGCTCTCTTCCGTCAAGGAGTCCCTGGATACTA
GGCTATCTCTCAAAGAGACTGACACCCAATCTATTGGCAGGCGCCTGTCT
GCCCTTGACTGCCTTTGGTTGCGGTAGAGGACACACCCGTACTTTTGAGA
AGGCAACATGAAAACCAAGCACTAATACCGATGCATGTCCAGCATAGTAT
TCCAAACACAAAAACGCCTGAGGATCATGGTGCCATGCTTAATCAATTTC
AAGGCCCAGATGCAGAGGCTGGCGATGAAATTGCGGAAAAGGTACGGCTT
TACCCAGACGACTTTCTTCCAGTTAAGCCTGTCCGAGGTACCTTCGGGTT
TGCGTGGTCAAAGGGCGTGGTGAGCCCTTTTGTGTGCACAAAAACTGAGA
AATTAGAGGCAATTTTGGATTCGTGTGCGCACCGTCTGTCACAAAACGCT
GTGTTAATGGACGTGGGTTGCGGCGACGGCGCTTTTCTTATGCAGGCAGC
TAGGAGGTTTGGCTGCAGGTGCTTCGGAGTGGAAATCGATGAAAGGTTGG
TAGCGCAGGCGCGGATAAGGGCGACAGAAAATCAACTGGCTCATCTCATT
GACATTTTTGAGTACGATCTATGCGATGTCTTTCCCACGCCGGATGATGG
GGCAACATGCTCAGGAAGCAGGCTCGAGGACGGGGCAGAGAGCAAGAATT
TAAAAAATGCTGTTGAAAATACCACCGTCTTTTTTTTCTACTTACTTCCC
GCGGTCCTGGAAAAACTTCTACCTTGGATACTTGGACGCCTGCGAAATGC
GTCCTCTGAGGGATGCATCACATGCATCTTCAATACTTGGGCACCTGACT
CGCAAGAGCTTGACGAGTGCTTCCTAGCTCCCCCCTTTTCAAAAGCACTA
CACGCGAAGCGGGGATTTTTTGTATATCAATCTTAATAAATGATTGATTT
TAAATTAATTCGTAGACAACATTCGAGTTGGCGTCGCTTATTTTTGGTTA
TTGTCCTAGCTTTGACTTTTTGGGGCATACACGGGGAGGATATGGGGAGG
TTAACCGCCTTGTCCAACACATACAAATGCTTTTACGCCGTCAAAAAGCT
CCTAAAATGTGAAATTATAATAAACACTACA back to topprotein sequence of rna6374 >rna6374-protein ID=rna6374-protein|Name=rna6374|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MREGFLLLVLLLLSSTSQAFLQPAIQHEQNSKSHRSLFQQGRFHSPAALH
ASPPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVD
PRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMK
EGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYEVGKRP
NTILLAVTVRLNYFKMLF back to topmRNA from alignment at CM002468.1:375639..376461+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6374 ID=rna6374|Name=rna6374|organism=Nannochloropsis gaditana|type=mRNA|length=823bp|location=Sequence derived from alignment at CM002468.1:375639..376461+ (Nannochloropsis gaditana)
ATGCGCGagggtttcctcctcctcgtcctgctgctgctatcCAGCACGTC
TCAAGCATTCCTTCAACCAGCAATACAACACGAGCAAAATTCTAAGAGTC
ATCGATCCTTGTTTCAGCAAGGTAGATTTCATTCGCCGGCGGCCCTTcac
gcctcccctcccaagcGCCTCACTGTGACGGAACAGTTGCAGCTATCTCC
AAACCGCTGGAAGCGGAATGGTCAGCCGCTCGAGCCCGGTGTAGGGGGCA
TTTGGCCCGGTAAACCCGACGCAAAGAAATACAAGGTACGAATGACGGGT
GACGTTTAACAGAGAGGGATTTCGTGTAAAATACTGGACCCTTGTATTGA
CCTTGGCCCCCAACTCCACCCCACAGGTCACAGTTGTGGACCCTCGCACG
AAGACGAATTACACGATGGACGTTCCCGAGGACCGGTACATTTTCTTTGC
CTTTGAAGATTCAGGAGTAGATCTGCCCATGGTGAACGGCAAGCGCATGT
GCCGGAATGGGTGTTGCACGACCTGCGCGgtgaaaatgaaggaggggaag
gtcaagatggaggcggccctgGGTCTCCTGCGCGACATGAAGAACAAGGG
GTACGCCCTCTCGTGCTGCTCGTTGCCGAGGTCAGATATTGTTTGCGAGC
TtcaggacgaggacgaggtgtATGTGAGGCAGTGGGGGGAGACCTTTGAG
AGCGGCGGAgtggagtggggaggtttcCTCCCCGAGGACGACTaaaagga
ggtgggaaagcgcCCAAACACGATTTTGCTTGCTGTTACAGTGAGATTGA
ACTACTTTAAAATGCTTTTCTGA back to topCoding sequence (CDS) from alignment at CM002468.1:375639..376461+ >rna6374 ID=rna6374|Name=rna6374|organism=Nannochloropsis gaditana|type=CDS|length=1971bp|location=Sequence derived from alignment at CM002468.1:375639..376461+ (Nannochloropsis gaditana)
ATGCGCGagggtttcctcctcctcgtcctgctgctgctatcCAGCACGTC
TCAAGCATTCCTTCAACCAGCAATACAACACGAGCAAAATTCTAAGAGTC
ATCGATCCTTGTTTCAGCAAGGTAGATTTCATTCGCCGGCGGCCCTTcac
gcctcccctcccaagcGCCTCACTGTGACGGAACAGTTGCAGCTATCTCC
AAACCGCTGGAAGCGGAATGGTCAGCCGCTCGAGCCCGGTGTAGGGGGCA
TTTGGCCCGGTAAACCCGACGCAAAGAAATACAAGGTCACAGTTGTGGAC
CCTCGCACGAAGACGAATTACACGATGGACGTTCCCGAGGACCGGTACAT
TTTCTTTGCCTTTGAAGATTCAGGAGTAGATCTGCCCATGGTGAACGGCA
AGCGCATGTGCCGGAATGGGTGTTGCACGACCTGCGCGgtgaaaatgaag
gaggggaaggtcaagatggaggcggccctgGGTCTCCTGCGCGACATGAA
GAACAAGGGGTACGCCCTCTCGTGCTGCTCGTTGCCGAGGTCAGATATTG
TTTGCGAGCTtcaggacgaggacgaggtgtATgaggtgggaaagcgcCCA
AACACGATTTTGCTTGCTGTTACAGTGAGATTGAACTACTTTAAAATGCT
TTTCTGAATGCGCGagggtttcctcctcctcgtcctgctgctgctatcCA
GCACGTCTCAAGCATTCCTTCAACCAGCAATACAACACGAGCAAAATTCT
AAGAGTCATCGATCCTTGTTTCAGCAAGGTAGATTTCATTCGCCGGCGGC
CCTTcacgcctcccctcccaagcGCCTCACTGTGACGGAACAGTTGCAGC
TATCTCCAAACCGCTGGAAGCGGAATGGTCAGCCGCTCGAGCCCGGTGTA
GGGGGCATTTGGCCCGGTAAACCCGACGCAAAGAAATACAAGGTCACAGT
TGTGGACCCTCGCACGAAGACGAATTACACGATGGACGTTCCCGAGGACC
GGTACATTTTCTTTGCCTTTGAAGATTCAGGAGTAGATCTGCCCATGGTG
AACGGCAAGCGCATGTGCCGGAATGGGTGTTGCACGACCTGCGCGgtgaa
aatgaaggaggggaaggtcaagatggaggcggccctgGGTCTCCTGCGCG
ACATGAAGAACAAGGGGTACGCCCTCTCGTGCTGCTCGTTGCCGAGGTCA
GATATTGTTTGCGAGCTtcaggacgaggacgaggtgtATgaggtgggaaa
gcgcCCAAACACGATTTTGCTTGCTGTTACAGTGAGATTGAACTACTTTA
AAATGCTTTTCTGAATGCGCGagggtttcctcctcctcgtcctgctgctg
ctatcCAGCACGTCTCAAGCATTCCTTCAACCAGCAATACAACACGAGCA
AAATTCTAAGAGTCATCGATCCTTGTTTCAGCAAGGTAGATTTCATTCGC
CGGCGGCCCTTcacgcctcccctcccaagcGCCTCACTGTGACGGAACAG
TTGCAGCTATCTCCAAACCGCTGGAAGCGGAATGGTCAGCCGCTCGAGCC
CGGTGTAGGGGGCATTTGGCCCGGTAAACCCGACGCAAAGAAATACAAGG
TCACAGTTGTGGACCCTCGCACGAAGACGAATTACACGATGGACGTTCCC
GAGGACCGGTACATTTTCTTTGCCTTTGAAGATTCAGGAGTAGATCTGCC
CATGGTGAACGGCAAGCGCATGTGCCGGAATGGGTGTTGCACGACCTGCG
CGgtgaaaatgaaggaggggaaggtcaagatggaggcggccctgGGTCTC
CTGCGCGACATGAAGAACAAGGGGTACGCCCTCTCGTGCTGCTCGTTGCC
GAGGTCAGATATTGTTTGCGAGCTtcaggacgaggacgaggtgtATgagg
tgggaaagcgcCCAAACACGATTTTGCTTGCTGTTACAGTGAGATTGAAC
TACTTTAAAATGCTTTTCTGA back to top
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