rna6373, rna6373 (mRNA) Nannochloropsis gaditana

Overview
Namerna6373
Unique Namerna6373
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length905
Alignment locationCM002468.1:373933..375313 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100047g15.6066.mrna
Orig protein idgnl|cribi|Naga_100047g15.6066
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:373933..375313 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100047g15gene6157Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24303.1cds6358Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6373rna6373-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6373 ID=rna6373|Name=rna6373|organism=Nannochloropsis gaditana|type=mRNA|length=905bp
GATCTCCTTGCCTGTGTTATGTCGTGCTCTTTCTCTCTTGAGCTTGTGTG
TGAGTTCAAGCATGAGGCTTCGACCCTGAGGGTCAGATTAGTGGTGGGGA
ATAGACCGGAAGGGTGGAAGGAAAAGAGCGAAGGTGAGAAATGCTTTCCC
ACTCACATAGTCATCTCTCTTTTGTTACACTGCACAAAAATACGCTTTGT
AGGACATCGACATCCTTGTTGGGTTAAGAGGAAAGAGGGACTAAGGAGGG
ACTTCATAGTACCAGAAGCTTCTCAAGATGCCCCCCAAGGTGCAACAAAA
GACGAAAGAGCAGAAGCTCGCCGCCGCCATGGCTGGTGGTAAGAGCAAGA
AGAAGAAGTGGTCCAAGGGGAAAATGCGTGAGAAGGTGGCGAACAAGGTT
CTCTTCGACGAGGAGATGTACACAAACCGTCTGCTGACCGAGATTCCCAA
GTCTAAGCTCATCACACCCTCGGCCCTTGTGGAGAGACTTAAAATCAATG
GGTCATTGGCCCGCGCCGCCTTGCGCGAATTGAAAGAGAAGGGACTGATC
AAGCCGGTCTCTGTGCACCACTCCCAGATCATTTACACACGTGCCACTGC
CGCCGCCGAGTAACGCCAAGCAGAAGGATAGGACGTGTAGATTTTTTAGG
GAGTAGGTGAACGAGTCAGTCGACGCTGGGGTGACAAATCAGGCGAAAGC
CTCGGACGGGTACTATGAGCATACTATCTTCTACCTTGGCCTCTCGTCCC
GGTGCTTGACAATGATGGAGAAGAAAGCTAAATATTCAACACCAAAACCA
TTGTGGGCTGACGGGATGGATTCTGGCGGTTAACCTGGCGAGTCAGGTTT
TTAAAAATGAACAAGAAGGAAACTCCGTTCAAAGCAGGCAGCAACGTAGT
ATTGC
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protein sequence of rna6373

>rna6373-protein ID=rna6373-protein|Name=rna6373|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MHVQHSIPNTKTPEDHGAMLNQFQGPDAEAGDEIAEKVRLYPDDFLPVKP
VRGTFGFAWSKGVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDG
AFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDV
FPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWI
LGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQ
S
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mRNA from alignment at CM002468.1:373933..375313-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6373 ID=rna6373|Name=rna6373|organism=Nannochloropsis gaditana|type=mRNA|length=1381bp|location=Sequence derived from alignment at CM002468.1:373933..375313- (Nannochloropsis gaditana)
CCCCCCCGCGCTACCAAGCGTCCCGATCCTCTCCGAGGCCCATCTCGGGT
CCAACAGACAATATTTTGCCCTTATCTCACATTAAATAAAAAAAAGTCAA
TCAATCCTCGAAGCGATGCGTTTAAAATGTACTCATATGTTAACCGTTGT
TGACACGTTCTATGCAGAGAGGGGAAATTATCTTTAACTCGGATGAAGCT
CCCACTGAAATATGATGCTCCTGTGATGGCGATTGTCTTGAAGACGATTA
TGTGGCTTTTGGTCTTACGCTCTCTTCCGTCAAGGAGTCCCTGGATACTA
GGCTATCTCTCAAAGAGACTGACACCCAATCTATTGGCAGGCGCCTGTCT
GCCCTTGACTGCCTTTGGTTGCGGTAGAGGACACACCCGTACTTTTGAGA
AGGCAACATGAAAACCAAGCACTAATACCGATGCATGTCCAGCATAGTAT
TCCAAACACAAAAACGCCTGAGGATCATGGTGCCATGCTTAATCAATTTC
AAGGCCCAGATGCAGAGGCTGGCGATGAAATTGCGGAAAAGGTACGGCTT
TACCCAGACGACTTTCTTCCAGTTAAGCCTGTCCGAGGTACCTTCGGGTT
TGCGTGGTCAAAGGGCGTGGTGAGCCCTTTTGTGTGCACAAAAACTGAGA
AATTAGAGGCAATTTTGGATTCGTGTGCGCACCGTCTGTCACAAAACGCT
GTGTTAATGGACGTGGGTTGCGGCGACGGCGCTTTTCTTATGCAGGCAGC
TAGGAGGTTTGGCTGCAGGTGCTTCGGAGTGGAAATCGATGAAAGGTTGG
TAGCGCAGGCGCGGATAAGGGCGACAGAAAATCAACTGGCTCATCTCATT
GACATTTTTGAGTACGATCTATGCGATGTCTTTCCCACGCCGGATGATGG
GGCAACATGCTCAGGAAGCAGGCTCGAGGACGGGGCAGAGAGCAAGAATT
TAAAAAATGCTGTTGAAAATACCACCGTCTTTTTTTTCTACTTACTTCCC
GCGGTCCTGGAAAAACTTCTACCTTGGATACTTGGACGCCTGCGAAATGC
GTCCTCTGAGGGATGCATCACATGCATCTTCAATACTTGGGCACCTGACT
CGCAAGAGCTTGACGAGTGCTTCCTAGCTCCCCCCTTTTCAAAAGCACTA
CACGCGAAGCGGGGATTTTTTGTATATCAATCTTAATAAATGATTGATTT
TAAATTAATTCGTAGACAACATTCGAGTTGGCGTCGCTTATTTTTGGTTA
TTGTCCTAGCTTTGACTTTTTGGGGCATACACGGGGAGGATATGGGGAGG
TTAACCGCCTTGTCCAACACATACAAATGCTTTTACGCCGTCAAAAAGCT
CCTAAAATGTGAAATTATAATAAACACTACA
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Coding sequence (CDS) from alignment at CM002468.1:373933..375313-

>rna6373 ID=rna6373|Name=rna6373|organism=Nannochloropsis gaditana|type=CDS|length=756bp|location=Sequence derived from alignment at CM002468.1:373933..375313- (Nannochloropsis gaditana)
ATGCATGTCCAGCATAGTATTCCAAACACAAAAACGCCTGAGGATCATGG
TGCCATGCTTAATCAATTTCAAGGCCCAGATGCAGAGGCTGGCGATGAAA
TTGCGGAAAAGGTACGGCTTTACCCAGACGACTTTCTTCCAGTTAAGCCT
GTCCGAGGTACCTTCGGGTTTGCGTGGTCAAAGGGCGTGGTGAGCCCTTT
TGTGTGCACAAAAACTGAGAAATTAGAGGCAATTTTGGATTCGTGTGCGC
ACCGTCTGTCACAAAACGCTGTGTTAATGGACGTGGGTTGCGGCGACGGC
GCTTTTCTTATGCAGGCAGCTAGGAGGTTTGGCTGCAGGTGCTTCGGAGT
GGAAATCGATGAAAGGTTGGTAGCGCAGGCGCGGATAAGGGCGACAGAAA
ATCAACTGGCTCATCTCATTGACATTTTTGAGTACGATCTATGCGATGTC
TTTCCCACGCCGGATGATGGGGCAACATGCTCAGGAAGCAGGCTCGAGGA
CGGGGCAGAGAGCAAGAATTTAAAAAATGCTGTTGAAAATACCACCGTCT
TTTTTTTCTACTTACTTCCCGCGGTCCTGGAAAAACTTCTACCTTGGATA
CTTGGACGCCTGCGAAATGCGTCCTCTGAGGGATGCATCACATGCATCTT
CAATACTTGGGCACCTGACTCGCAAGAGCTTGACGAGTGCTTCCTAGCTC
CCCCCTTTTCAAAAGCACTACACGCGAAGCGGGGATTTTTTGTATATCAA
TCTTAA
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Synonyms
Publications