EWM24303.1, cds6358 (CDS) Nannochloropsis gaditana

Overview
NameEWM24303.1
Unique Namecds6358
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:374128..374883 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24303.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100047g15.6066.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:374128..374883 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR026170FAM173
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|585105695|gb|EWM24303.1| (hypothetical protein Naga_100047g15 [Nannochloropsis gaditana])

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
Query:    1 MHVQHSIPNTKTPEDHGAMLNQFQGPDAEAGDEIAEKVRLYPDDFLPVKPVRGTFGFAWSKGVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS 251
            MHVQHSIPNTKTPEDHGAMLNQFQGPDAEAGDEIAEKVRLYPDDFLPVKPVRGTFGFAWSKGVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS
Sbjct:    1 MHVQHSIPNTKTPEDHGAMLNQFQGPDAEAGDEIAEKVRLYPDDFLPVKPVRGTFGFAWSKGVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS 251          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|695392641|ref|XP_009520393.1| (hypothetical protein PHYSODRAFT_359407 [Phytophthora sojae] >gi|348685290|gb|EGZ25105.1| hypothetical protein PHYSODRAFT_359407 [Phytophthora sojae])

HSP 1 Score: 72.7886 bits (177), Expect = 5.457e-12
Identity = 57/196 (29.08%), Postives = 85/196 (43.37%), Query Frame = 0
Query:   57 FAWSKG-VVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS 251
            F W +G  ++P   ++ + +  I++    R++ + VL D+GCGDG   ++AA+RFG R  GVEI+E L+ + R     N L  L+ +   DL                          L+  +   TV   YLLP  L++L P     L     +  I C  NTWA      DE   A P+          FVY+S
Sbjct:   23 FMWIEGDSLAPPCQSERDVVSKIVEIA--RVTPDDVLFDLGCGDGRICIEAAKRFGARARGVEIEEFLIKRFRELIAANDLQELVSVSHGDL--------------------------LEEDLSEATVIVTYLLPEALDQLTPKFTKLLNQTDKDVRIIC--NTWAMQGLTPDERHDAGPYGNV-----PLFVYRS 183          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1082773113|gb|OGA91057.1| (hypothetical protein A3G27_13005, partial [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14])

HSP 1 Score: 71.633 bits (174), Expect = 1.120e-11
Identity = 52/165 (31.52%), Postives = 75/165 (45.45%), Query Frame = 0
Query:   62 GVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQE 226
            G  +PFV T  E +E +L     R  ++  +MD+G GDG  ++ AA++FG R  GVEID RLVA +R  A    +A  +   E D+                       + +L+ A    TV   YLLP +++KL P +L  LR  +           W PD  E
Sbjct:   12 GERAPFVTTPDEVVERMLAFSGTR--EDDFVMDLGSGDGRIVIAAAQKFGARGLGVEIDARLVALSRENARRAGVAGRVAFEEGDVL----------------------TADLRRA----TVVTIYLLPFLIDKLQPKLLQELRPGARIVTHAFAMTGWKPDRTE 148          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|566009147|gb|ETI32058.1| (hypothetical protein F443_21041 [Phytophthora parasitica P1569] >gi|568034701|gb|ETM32368.1| hypothetical protein L914_20198 [Phytophthora parasitica] >gi|570312853|gb|ETO60801.1| hypothetical protein F444_21047 [Phytophthora parasitica P1976] >gi|570966954|gb|ETP30073.1| hypothetical protein F442_20849 [Phytophthora parasitica P10297])

HSP 1 Score: 70.8626 bits (172), Expect = 2.325e-11
Identity = 54/197 (27.41%), Postives = 85/197 (43.15%), Query Frame = 0
Query:   56 GFAWSKG-VVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS 251
             F W +G  ++P   ++ + +  I++    R++ + VL D+GCGDG   ++AA+R+G R  GVEI++ L+ + R   T N L  L+ +   DL                          L+  +   TV   YLLP  L++L P     L     +  I C  NTW       DE +   P+          FVY+S
Sbjct:   22 AFMWIEGDSLAPPCQSEHDVVSKIVE--IARVTPDDVLFDLGCGDGRICIEAAKRYGARARGVEIEDFLIKRFRELITSNDLQQLVSVSHGDL--------------------------LEEDLSEATVLVTYLLPDALDQLTPKFTKLLSQTDKDVRIIC--NTWGIRGLTPDERYDTGPYGNV-----PLFVYRS 183          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1082662818|gb|OFZ87286.1| (hypothetical protein A2W21_06575 [Betaproteobacteria bacterium RBG_16_66_20])

HSP 1 Score: 70.4774 bits (171), Expect = 9.208e-11
Identity = 52/165 (31.52%), Postives = 75/165 (45.45%), Query Frame = 0
Query:   62 GVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQE 226
            G  +PFV T  E +E +L     R  ++  +MD+G GDG  ++ AA++FG R  GVEID RLVA +R  A    +A  +   E D+                       + +L+ A    TV   YLLP +++KL P +L  LR  +           W PD  E
Sbjct:   24 GERAPFVTTPDEVVERMLAFSGTR--EDDFVMDLGSGDGRIVIAAAQKFGARGLGVEIDARLVALSRENARRAGVAGRVAFEEGDVL----------------------TADLRRA----TVVTIYLLPFLIDKLQPKLLQELRPGARIVTHAFAMTGWKPDRTE 160          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|675211541|ref|XP_008914655.1| (hypothetical protein PPTG_18341 [Phytophthora parasitica INRA-310] >gi|567946636|gb|ETK72442.1| hypothetical protein L915_20445 [Phytophthora parasitica] >gi|567975343|gb|ETL25898.1| hypothetical protein L916_20306 [Phytophthora parasitica] >gi|568004797|gb|ETL79107.1| hypothetical protein L917_20178 [Phytophthora parasitica] >gi|568085157|gb|ETN00071.1| hypothetical protein PPTG_18341 [Phytophthora parasitica INRA-310] >gi|570936671|gb|ETP01928.1| hypothetical protein F441_20898 [Phytophthora parasitica CJ01A1] >gi|970633819|gb|KUF79315.1| Ribosomal protein L11 methyltransferase [Phytophthora nicotianae] >gi|970652994|gb|KUF91553.1| Syntaxin-18 [Phytophthora nicotianae] >gi|970658822|gb|KUF96541.1| Ribosomal protein L11 methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 68.9366 bits (167), Expect = 1.224e-10
Identity = 53/197 (26.90%), Postives = 84/197 (42.64%), Query Frame = 0
Query:   56 GFAWSKG-VVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQELDECFLAPPFSKALHAKRGFFVYQS 251
             F W +G  ++P   ++ + +  I++    R++ + VL D+GCGDG   ++AA+R+G R  GVEI++ L+ + R     N L  L+ +   DL                          L+  +   TV   YLLP  L++L P     L     +  I C  NTW       DE +   P+          FVY+S
Sbjct:   22 AFMWIEGDSLAPPCQSEHDVVSKIVE--IARVTPDDVLFDLGCGDGRICIEAAKRYGARARGVEIEDFLIKRFRELIASNDLQQLVSVSHGDL--------------------------LEEDLSEATVLVTYLLPDALDQLTPKFTKLLSQTDKDVRIIC--NTWGIRGLTPDERYDTGPYGNV-----PLFVYRS 183          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1084853201|gb|OGQ84068.1| (hypothetical protein A3F90_14865 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19])

HSP 1 Score: 68.5514 bits (166), Expect = 1.453e-10
Identity = 51/184 (27.72%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   54 TFGFAWSKGVVS--PFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDSQEL-DECFLAP 234
            T G AW+   +   PFV T  E ++ +L+     + +  V+ D+G GDG  +++AA+++G +  G+E+D  LVA+AR +A E  + HL +                      R+EDG     LK  +   TV   Y+LP   E + P     L+  S           W P   E+ D+  + P
Sbjct:   26 TTGRAWAASPIDEIPFVPTPIEVVDRMLELA--EVKKGDVVYDLGSGDGRIVIRAAKKYGVKAVGIEMDSWLVAEARAKAKEEGVEHLAEF---------------------RIEDG-----LKTDISAATVVTLYMLPWFNEAMRPRFQKLLKPGSRIVAHDYGIEGWPPARTEIHDKVEIRP 181          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1084680601|gb|OGP27884.1| (hypothetical protein A2038_10005 [Deltaproteobacteria bacterium GWA2_57_13])

HSP 1 Score: 68.5514 bits (166), Expect = 1.469e-10
Identity = 51/177 (28.81%), Postives = 77/177 (43.50%), Query Frame = 0
Query:   66 PFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNTWAPDS-QELDECFLAPPFSKALH 241
            PFV T  E  + +L+     ++++ V+ D+G GDG  +++AA++FG R  G EID  LV  AR +A E  ++HL++  E D      TP                           TV   Y+LP   EK+ P +  RLR  +           W P    EL++  + P   K  H
Sbjct:   33 PFVPTPVEVADRMLELAG--VTKDDVVYDLGSGDGRIVIRAAKKFGARGVGFEIDSELVKLARKKAAEEGVSHLVEFREQDALTADVTP--------------------------ATVVTLYMLPWFNEKIRPVLQRRLRPGARVVSHDFDIERWPPTHVVELEKVEVLPGGRKHRH 181          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1183485957|gb|ORZ09693.1| (hypothetical protein BCR41DRAFT_358320 [Lobosporangium transversale])

HSP 1 Score: 69.707 bits (169), Expect = 1.563e-10
Identity = 54/200 (27.00%), Postives = 84/200 (42.00%), Query Frame = 0
Query:   21 NQFQGPDAEAGDEIAEKVRLYPDDFLPVKP-VRGTFGFAWSKGVVSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGC----RCFGVEID--------ERLVAQARIRATENQLAHLIDI------FEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWIL 201
            N ++G D E  +   ++ +  PD    VKP     F + W+ G +SPF  T    L  +L            L+D+GCGDG  L+QA + F      R  G+++D        +R+  QA+ +        + DI      +  DL     T DD  +       +    + +K  +E  +  F YLLP  L KL P +L
Sbjct:   11 NSYKGSDFEEQEH--DRYKNNPDLLAQVKPKATRLFSYNWASGFISPFRPTPQGILSDMLQHVHFSTPNRDSLLDLGCGDGIVLVQALQTFPSTQLKRAIGIDLDKPLLEAAKDRIFLQAQTKTDPKSKTEMHDILSRLELYHGDLT----TKDDLLSPVMPTEPNSKAPQTMKRLIEQCSHLFVYLLPDALSKLTPLLL 204          
BLAST of EWM24303.1 vs. NCBI_GenBank
Match: gi|1214709945|gb|OWZ21080.1| (Villin [Phytophthora megakarya])

HSP 1 Score: 71.2478 bits (173), Expect = 1.899e-10
Identity = 53/164 (32.32%), Postives = 76/164 (46.34%), Query Frame = 0
Query:   64 VSPFVCTKTEKLEAILDSCAHRLSQNAVLMDVGCGDGAFLMQAARRFGCRCFGVEIDERLVAQARIRATENQLAHLIDIFEYDLCDVFPTPDDGATCSGSRLEDGAESKNLKNAVENTTVFFFYLLPAVLEKLLPWILGRLRNASSEGCITCIFNT--WAPDSQ 225
            ++PF  +    LE  +D  A  LS + VL D+GCGD   L+ AA + G RC GVE +E LV +AR R  E+ +  L+DI   D  +V                      +L +A    T  F YL+P  ++ LLP +    R       +T +F+   W PD Q
Sbjct:  902 LAPFTPSGEGVLEHAMDLLA--LSGSDVLFDLGCGDARILVHAAEQTGARCVGVEYNEDLVKRARARVEEHGVHELVDIRHGDALEV----------------------DLTSA----TALFLYLVPQGIKLLLPKLEEARRLHVR--IVTYVFSIPGWTPDDQ 1035          
The following BLAST results are available for this feature:
BLAST of EWM24303.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105695|gb|EWM24303.1|0.000e+0100.00hypothetical protein Naga_100047g15 [Nannochlorops... [more]
gi|695392641|ref|XP_009520393.1|5.457e-1229.08hypothetical protein PHYSODRAFT_359407 [Phytophtho... [more]
gi|1082773113|gb|OGA91057.1|1.120e-1131.52hypothetical protein A3G27_13005, partial [Betapro... [more]
gi|566009147|gb|ETI32058.1|2.325e-1127.41hypothetical protein F443_21041 [Phytophthora para... [more]
gi|1082662818|gb|OFZ87286.1|9.208e-1131.52hypothetical protein A2W21_06575 [Betaproteobacter... [more]
gi|675211541|ref|XP_008914655.1|1.224e-1026.90hypothetical protein PPTG_18341 [Phytophthora para... [more]
gi|1084853201|gb|OGQ84068.1|1.453e-1027.72hypothetical protein A3F90_14865 [Deltaproteobacte... [more]
gi|1084680601|gb|OGP27884.1|1.469e-1028.81hypothetical protein A2038_10005 [Deltaproteobacte... [more]
gi|1183485957|gb|ORZ09693.1|1.563e-1027.00hypothetical protein BCR41DRAFT_358320 [Lobosporan... [more]
gi|1214709945|gb|OWZ21080.1|1.899e-1032.32Villin [Phytophthora megakarya][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6373rna6373Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications