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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100105g1.10587.mrna |
| Orig protein id | gnl|cribi|Naga_100105g1.10587 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:334451..335717 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6357 ID=rna6357|Name=rna6357|organism=Nannochloropsis gaditana|type=mRNA|length=1891bp
CCCTGGCACGCTTACTCACGCATGTTCCGACCACAATGATGCGCAGGCGA
AATCATGCTTGTCAATCAACGACGATGCGCAGCCATGGCTGCTATCCTTT
TCAGTGCCTGGAATGCGCAGGCTTTTATCCCTCGCCTTCCCGCCAACTTG
TATCAGCGCCAGCAGCATAGCAAGTTGTCCCTCTACTCGACACTATCAGA
AAATGTCCAGACAACCGTGGAGGCCCGCGCTAATTCCTCTGTTGCCCTCT
TTGTCACCGTCCCTGGCACGCTTACCCGCAAGGCTTACGACCAGGCCTGC
AAACGCATGATCGAGGAAAGCAAAACGTCAATCCCGGGCTTCCGGAAAGG
CCAGCGTGTCCCCGAGCAAGTCCTTTTGAATGCGGTGGGCGGCCCCCAGG
TCATCATCAATGAAGCTCTGGACATTCTGTGCGAAGACGCACTGAAAAAG
GCCATCGACGAATCGGACGTGAAGGCGGTGGGGCAAGCCTCATTGGTGTC
ACACCCTGAGACCCTGATCGCCGCCTTCAAGCCCGGGGAGCCCATTGTCA
TGGAGCTGACTGTGGACGTGTACCCGGAGGTAGAATTCACGGGTCCTTAC
GCGGGCCTGAAGGTGCAGGTGGATCGCATTCCCTTGGAGAACGAGAAGGT
CAAACAGGCGCTGGAATCGCTCCGAAAGAAGCGCGTCCGTCTAGTGGACA
CGGCGCCTGGCTACGAGGGCAAGCTGGGGGACTCGGCCATCGTGAACATG
CAGGCGTTTCAGATGCTCTCGGACGGCACCCGTGGGCCCGAGATGAGGAA
CATCGCGGCGGGTGAGGGCGTGGAGGTTGTGTTGGAGGAGGGGCGATTCC
TGCCGGGCGTCGTCGAGGGTCTGGTCGGGAAGCCGGCGGGCTGCAAGGTG
GTGATCCCCGTGACTTTCCCCGAGAACATCCGGGACCCGCAGCTGGCCGG
TATCAAAGCCGAGTTCGAGGTGGAGATATTGGAGCTGAAAAACCGGATCG
TTCCTGAGATTGACGAGCAGTTCGCCAAGGAGATTCGACCGGACTTGACG
CCGGAGGGAATCAAACAAGAGGTTGTGGACGCCGTGAATGCCGATGCGGA
GGAGCGGACCAAGATGAACCGCAACAAGGCTCTGGAGGAGGCGCTGCTGG
CAATCACTCGGGCCGAGATCCCGGAGTGCTGGATTGTGGAGGAGACGCGG
CGGAAGTTCGCCTTGATGATGCAAGAGGTGTCCACGCAGGGCAAGTCGGA
GGAGGAGGTGAAAAAGATGATAACCAAGGAAAACTTCGAGAAGTATCGAG
AAATCGCCTATCCGCAGACGGTCAAGACTTTGATGCTGGGTGTGGCGACT
GCCAAAGTGGCGGAAGACGAGGGTTTGCAGGTGGACCCGCTGGAGCTGCA
GGACCAGATCGATTTGAGAAAGCTGGAGGCGGAGAGACAAGGGCTGGACG
AGAAGGCCTTGCGCGATCAGCTCGAGGCGAAGCTCTTAGCAGACATGGTC
TTGGATCGTCTCGCGGACCAGGCGGATATAACGTACGTGGACGTGAGCGA
CGATGCTTGAGGGAAGAGGGACACAGGCAGGGGGAAAAGGGGCCGGGGGG
GGAAGTTCACATGGTTGGCAAGGCAATAGGCGACATGCCCCGTCCAGAGG
CAGGCGGGAGGCGGCACAGGTGGTTTGTAATTGTGTCGCAAATATCTTTA
AAATCGAGAGATTGATGTCGGGAGCTGGAGCAAGAAGGAGCGGTGGAGAC
AGGAGAGGGAGGACGCCGTACGAGGGAGGGTCAGCACATAATGGGTTCTC
GCATGAGGACATAAAAGACGAGCATGAGGCAGGACGGCGCATAAAGAAAC
ACGCGTGTGGACGAAGACAATAAAATGCGCGAGGCTACGGA back to topprotein sequence of rna6357 >rna6357-protein ID=rna6357-protein|Name=rna6357|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MTRVGFRSPASPRPGQRAARGLFGLRRRRIPNGFAEGKPTAAVGTGYGLA
LGWNDPRRLLRLENLLDAVALPALPPSLSEEQDPVRSKPGQDEVGVGTVL
EIRFSSKRVRDMLTQSTLCTTLAHTHACR back to topmRNA from alignment at CM002468.1:334451..335717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6357 ID=rna6357|Name=rna6357|organism=Nannochloropsis gaditana|type=mRNA|length=1267bp|location=Sequence derived from alignment at CM002468.1:334451..335717- (Nannochloropsis gaditana)
ATGACGCGGGTGGGTTTTCGCTCCCCCGCCTCTCCTCGTCCGGGACAGCG
GGCTGCACGGGGCCTTTTTGGCCTGCGCCGCCGCCGAATTCCAAATGGAT
TTGCAGAAGGCAAGCCAACAGCCGCGGTTGGGACTGGATACGGCCTTGCC
CTGGGGTGGAACGATCCTCGACGGCTGCTGCGGCTTGAGAATCTCCTGGA
TGCTGTCGCGCTCCCCGCCTTGCCTCCCTCCCTGTCAGAGGAGCAGGATC
CTGTTCGGTGGGTGGAAAGGTACCTGCAGGTCCTGCGAGAGGAGGGGAGC
GGGCAGGGGTGGTCGCTCGGTGTCTCTGCGCAGCTCGCTCAGTTCGCCCG
GGGGTTGGCATTGGAAGCGCGGGCGGAATGGTATGAGGAGGGCAGGGGGG
GAGAGGCGGGACCCGTGGCGCCGTGGAACCGGTTGTTCACGGCCATGGTG
GTGGATCGTCTGAGCTTGGGCTGCGGTCGAGCGGGGGACGGGATAGCGGT
CGGGACGGGGGGCGCGGAAGGCCCTCCCTTGCGGTGGGCGTATCATCTGC
ATGGGGGACCGAATCAGGAGGGCGAGGAGGGTGGGAGGGAGGGGACAAGT
CTGCGGGAATACCAGGAGATGGACCTGGACGAGGGGCATGGGCGGGCGCA
CGAGGACTTCTTCCACTACCGAGAGGCGACCTCGCGTCGTCTAGGAAGCG
ATGGGGGATGGAGTGGCGGCATTGGGAGCTTGCTCCGGAGCGGTCGACGC
CGGAAACGAGCAGGGCGGGCAGCGTACGCATTGGATGCGGAGATGGCCAT
GGTCAGCTTGGAGGAGTCCGCGGGGGGGGCGGGGAAAGGGGGAAGGGAGG
GAGATGTCTACGAGGACCCGTCCTCGCCGGGGAGGGATGGGCAGGGGGGA
AATAGCGAAGAGGGAGAGGGAGGAGGTGGAAGGAAGCGGGCCCGGAGAGT
CTCAGGAGGGGATGATATGGAGCCTGTTCATGGGGTGCAGCCGTCGCTGG
GCAAGGAGAGTGAGAGTGGGGGCATCGGAGGAAAGGACGCGGACAGTCTT
GCCTCCCTCAGTCGGAGTCTCGCGAGGGAGTCCAAGGCCTGGGGCGGGGC
CATGAGCTTTCTCAAGGCGTTTCTATGATCACAGGAGTAAACCAGGTCAA
GACGAGGTTGGAGTGGGGACGGTCCTGGAAATACGATTTTCCAGTAAACG
GGTGAGAGACATGCTCACTCAAAGTACATTGTGTACGACTCTCGCTCACA
CACATGCGTGTAGATAG back to topCoding sequence (CDS) from alignment at CM002468.1:334451..335717- >rna6357 ID=rna6357|Name=rna6357|organism=Nannochloropsis gaditana|type=CDS|length=780bp|location=Sequence derived from alignment at CM002468.1:334451..335717- (Nannochloropsis gaditana)
GAGTAAACCAGGTCAAGACGAGGTTGGAGTGGGGACGGTCCTGGAAATAC
GATTTTCCAGTAAACGGGTGAGAGACATGCTCACTCAAAGTACATTGTGT
ACGACTCTCGCTCACACACATGCGTGTAGATAGATGACGCGGGTGGGTTT
TCGCTCCCCCGCCTCTCCTCGTCCGGGACAGCGGGCTGCACGGGGCCTTT
TTGGCCTGCGCCGCCGCCGAATTCCAAATGGATTTGCAGAAGGCAAGCCA
ACAGCCGCGGTTGGGACTGGATACGGCCTTGCCCTGGGGTGGAACGATCC
TCGACGGCTGCTGCGGCTTGAGAATCTCCTGGATGCTGTCGCGCTCCCCG
CCTTGCCTCCCTCCCTGTCAGAGGAGCAGGATCCTGTTCGGAGTAAACCA
GGTCAAGACGAGGTTGGAGTGGGGACGGTCCTGGAAATACGATTTTCCAG
TAAACGGGTGAGAGACATGCTCACTCAAAGTACATTGTGTACGACTCTCG
CTCACACACATGCGTGTAGATAGATGACGCGGGTGGGTTTTCGCTCCCCC
GCCTCTCCTCGTCCGGGACAGCGGGCTGCACGGGGCCTTTTTGGCCTGCG
CCGCCGCCGAATTCCAAATGGATTTGCAGAAGGCAAGCCAACAGCCGCGG
TTGGGACTGGATACGGCCTTGCCCTGGGGTGGAACGATCCTCGACGGCTG
CTGCGGCTTGAGAATCTCCTGGATGCTGTCGCGCTCCCCGCCTTGCCTCC
CTCCCTGTCAGAGGAGCAGGATCCTGTTCG back to top
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