EWM24348.1, cds6342 (CDS) Nannochloropsis gaditana

Overview
NameEWM24348.1
Unique Namecds6342
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:335461..335717 -
Alignment locationCM002468.1:334451..334583 -

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Properties
Property NameValue
Protein idEWM24348.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100105g1.10587.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:335461..335717 -
CM002468.1supercontigCM002468.1:334451..334583 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24348.1 vs. NCBI_GenBank
Match: gi|585105742|gb|EWM24348.1| (hypothetical protein Naga_100105g1 [Nannochloropsis gaditana])

HSP 1 Score: 259.996 bits (663), Expect = 9.001e-88
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MTRVGFRSPASPRPGQRAARGLFGLRRRRIPNGFAEGKPTAAVGTGYGLALGWNDPRRLLRLENLLDAVALPALPPSLSEEQDPVRSKPGQDEVGVGTVLEIRFSSKRVRDMLTQSTLCTTLAHTHACR 129
            MTRVGFRSPASPRPGQRAARGLFGLRRRRIPNGFAEGKPTAAVGTGYGLALGWNDPRRLLRLENLLDAVALPALPPSLSEEQDPVRSKPGQDEVGVGTVLEIRFSSKRVRDMLTQSTLCTTLAHTHACR
Sbjct:    1 MTRVGFRSPASPRPGQRAARGLFGLRRRRIPNGFAEGKPTAAVGTGYGLALGWNDPRRLLRLENLLDAVALPALPPSLSEEQDPVRSKPGQDEVGVGTVLEIRFSSKRVRDMLTQSTLCTTLAHTHACR 129
The following BLAST results are available for this feature:
BLAST of EWM24348.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105742|gb|EWM24348.1|9.001e-88100.00hypothetical protein Naga_100105g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6357rna6357Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications