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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100246g6.10066.mrna |
| Orig protein id | gnl|cribi|Naga_100246g6.10066 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:240525..242343 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6320 ID=rna6320|Name=rna6320|organism=Nannochloropsis gaditana|type=mRNA|length=1596bp
ATGCCAACTGAGTTTGCTGGTTGGTTGGCGATGTACCACGGATTTCGGAG
TACTCTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCATTTGTGACC
TTTCTGACAACAAATCACAACCTCCGGACTTCGTGGAATCCCTTATTACG
GCCGTTTGTAGTTTTGTTCGTATACATGTGGCAAACCCGACTAGTGTTAC
AATTACATATCCAATGCTGGTGCCGCTCAAGTATCCGTATCATACGAATA
TGTTCGAGGCCTTGGAAACTGCTTTCTACTGCTTTTGGCGTAAAACTGCA
ACAATAGGTTTTCGGACATTCGTCACCAACTTTGAAGACGAGTTAAAAGA
ACAAGATGAGAGTGTCAAGATCGGGGGGGGGCTTCAATGGGATCACAGAG
AAGTCGAGAGCATGGAAATACAACATGAATGCCTGCACGAATCTACAAGG
ATGCGACAACAGCAATCTCTGGAACAGCTTCCATGGGTAAAAGAACGAGG
GAAGACCGAAAATCACAAGTTCAGGACATCTGAGTATCCGCCAGTTTTCT
CGTCGTATAACAGGCTGTCAGAAAGACAACTGGAGAGAAAGCCTACTCCC
CTTGATGCAGACATTTTGACTTTTGTCGACACGCTTAATCACGAGAGGAA
TGAAGCTGTCTCCACATCATTCCTCGCATTGCCAGTGACCGACCACATGC
TTTCTTGGAGCTCGAGGTCCAGTGCAGAGGAGAACATACTTCCAAGACCC
CGAAAAATGCGCGAACCAATTTCCGACAATAGCATGCGGAAACGCGAGTC
GAAAGCACTTTGTTTATCGTCTATGAATATGGTTGATGATAATGTCGCGC
GGTTGACTGAACGGACAATATCCGAGCCGTCCTCAGCTGTGGCGTCCATA
AGACAATCAGTCAGTGACTTACCCACGTCCGCAGTACCAGCGTTATCAGC
AGAATTAAAAACAGACTTAGCGACATTTCAGGTAGAACCCTTTATGCGTG
CTTGGGGACCTTTGGACAAGAAAAAGTGGGAAAACCCCTTGAGTTCGAAT
AACTGCAACGCTATCGAAGTGTATGGTTGTGAGATGAACTCAGACCAAAC
AGTCGACAATGCTTCTTCTTCTGCTGTGACAAGCATAAGGAAGAGCAACC
TATGTTTTGACATTAATGCAGACTGTTGCAGATGTATCGGGTATCAACGT
CTCTGCGGGGAGGAGATAAATCCTGTCTCTACTCACATACCTGACCCACG
TATAGATTATGCGAAGGATCCAGTATCTGCCGATGTTGCGACGTTATCAC
CATCGACGGTTGTAAAAGGTGTAATGCAGATGCGAGAAAGGAGATCCCTT
GATAAAATCAATGCTCCGAAAACCTTGCCGCTTTCTTTCTTCTCGTGCCT
TCCAGCCGAGTCTTGCCCTTACTCGATCTTACCATCAAGCACATGGGACC
TGGAGCCATCCAAAGAAGAGAGCGGAGCGGAGAATGAAGATGAAGTGAAG
AGCAAGAAAATGGTTGGTCGCAGAAGGGATGTCTGCGGAAAGGGATCATT
TGCGTCTTTTCATAGCGATACAGCTACCAACAAGATGAAAAAATGA back to topprotein sequence of rna6320 >rna6320-protein ID=rna6320-protein|Name=rna6320|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MHKGILRLSSIFLIHSAYFCSTFRLIGTNRLRTLFPQSRLYAPTLVAWVK
DQPADLQETFGDRFQDSDHKEGQKEHMARKTTADPIKDSSTKVSAAKKAS
PKKKAEAPGKSRSGTNSVIQNTKLSAENKAEREFKTPRRYKEGSTKQKTR
RGKSPEDLEDDVEVMAEKVGIELPEDEKQKEEEVESAIEATSDRPYREYS
KQGALEV back to topmRNA from alignment at CM002468.1:240525..242343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6320 ID=rna6320|Name=rna6320|organism=Nannochloropsis gaditana|type=mRNA|length=1819bp|location=Sequence derived from alignment at CM002468.1:240525..242343+ (Nannochloropsis gaditana)
TAATTACTGTCGCTCTGATTTTAAGGGCCATATAGTCATAGCTTATATAT
ACCCGACTACAGGGGGCCTTATATGCACAAAGGCATACTACGTTTGAGCA
GTATATTTCTTATACACTCGGCCTACTTTTGTAGCACCTTCAGACTCATC
GGCACAAACAGGCTGCGCACTCTTTTTCCGCAATCCCGTTTGTACGCCCC
AACTCTTGTGGCGTGGGTGAAGGATCAACCAGCAGACTTGCAAGAGACGT
TTGGAGACCGCTTTCAAGATAGTGACCACAAAGAAGGACAAAAAGAACAC
ATGGCTCGTAAAACCACAGCAGATCCTATCAAAGATAGCAGCACTAAGGT
CAGTGCTGCCAAAAAAGCTTCTCCTAAGAAGAAGGCCGAGGCACcgggga
aaagcaggagcgGTACGAATTCTGTGATACAGAATACGAAATTGAGTGCT
GAAAATAAAGCTGAAAGAGAATTCAAGACCCCACGTCGGTACAAGGAAGG
AAGTACAAAACAAAAAACACGAAGAGGCAAAAGTCCTGAAGATCTTGAGG
ACGATgtggaggtgatggcggaGAAAGTGGGAATCGAGCTACCTGAGGAC
GAAaagcagaaagaggaggaggtggaaagtgCCATCGAAGCGACGAGCGA
TCGCCCATACCGCGAGTATTCCAAACAAGGCGCCCTTGAGGTATGATTGA
TTTGTAAGAGAAAAGGTATGGAGGGATTTACATGTTATGTACAATTCCAT
AATTCTTATTTTCTTTGCTGGTGCTTAAAGTCATTGTTTTGGAGACACAA
TTTCTTCCTGTACATCACATTACCAACAGAAATTGAAAAAAACACATAAA
GTGACGGAGAAtaaggcgggggaaggagacccGTTCTCCGACGCCGCCAG
ACGTGCTCCTAAATCTAAGCGCGGAATCAATGCCCCCCCTtcgaaagaag
agaaagatgTACCTCCGACAAAGCGTCACACCAAAGCTGGAGACATGAGT
GAACGTGTAAGTGCATGCGAAGACacaaagcaagaaaagggatGTTTTGT
ATGTACCAGGTGATCGACAGCTTTGATGCAAAAAGGGCCAAGGTGACGCG
AACCTGAAGTACGTTCCCATCTCCCACGTATTTTTCCACAGAGCAAGGTT
ACAAATGAAAAGAATCGTCCGTTGGCCGACGCCTTATATGAGCTGGCCGA
CTTCGTGCTGCACGGTGACGCGATTCAGAAGGGGCTGAGTTACCAGAAAG
CAGCTAAATCAGTACGTGAGGCGAAGCAACCTATCACATCCAAAGATGTA
GCCATCAAATTGACAGGGGTTGGGAAAAGCGTGGGTGATAAAATCGAAGA
GTacgtgaaggaagggaagatccAGGTGCTGGAAGAGTACCGAAGCGGAA
AACGAGGCAAGTAAGGATAGGGCTCCCGTGTGAAGAATGGTGCGAAACGA
GAGAAGACACACGTAGATGGACGAATCCAGCTACGGCGATACAAATGCGT
AAGATGTGTTGGTGTATTGAATTGAGGGAATGGTTGCATGCTGGTTGCTC
CAGATTTGTCTGAAATGGTAgtttgaggaggaagctcaATTGAGAAGAAC
ATGTGCTTCGGATTGCAAGCTTGTATACTTGTAAAAGACTGAAAAAAATC
TGACCACACAAAAGTGGTGTTAGTTTTTCAACATTTGGGTGCTGCATTTC
TCCTCGGCATGTTTTGAGCCTTCTGGGTGAAGCTTGGGATGTGACCCACG
GGtttgaggagaaagaaataaaaaaTGAAAGTAGTGATCCGCTAAATTCA
CTTGGCGAGACATCTGCTT back to topCoding sequence (CDS) from alignment at CM002468.1:240525..242343+ >rna6320 ID=rna6320|Name=rna6320|organism=Nannochloropsis gaditana|type=CDS|length=624bp|location=Sequence derived from alignment at CM002468.1:240525..242343+ (Nannochloropsis gaditana)
ATGCACAAAGGCATACTACGTTTGAGCAGTATATTTCTTATACACTCGGC
CTACTTTTGTAGCACCTTCAGACTCATCGGCACAAACAGGCTGCGCACTC
TTTTTCCGCAATCCCGTTTGTACGCCCCAACTCTTGTGGCGTGGGTGAAG
GATCAACCAGCAGACTTGCAAGAGACGTTTGGAGACCGCTTTCAAGATAG
TGACCACAAAGAAGGACAAAAAGAACACATGGCTCGTAAAACCACAGCAG
ATCCTATCAAAGATAGCAGCACTAAGGTCAGTGCTGCCAAAAAAGCTTCT
CCTAAGAAGAAGGCCGAGGCACcggggaaaagcaggagcgGTACGAATTC
TGTGATACAGAATACGAAATTGAGTGCTGAAAATAAAGCTGAAAGAGAAT
TCAAGACCCCACGTCGGTACAAGGAAGGAAGTACAAAACAAAAAACACGA
AGAGGCAAAAGTCCTGAAGATCTTGAGGACGATgtggaggtgatggcgga
GAAAGTGGGAATCGAGCTACCTGAGGACGAAaagcagaaagaggaggagg
tggaaagtgCCATCGAAGCGACGAGCGATCGCCCATACCGCGAGTATTCC
AAACAAGGCGCCCTTGAGGTATGA back to top
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