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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100246g7.10067.mrna |
| Orig protein id | gnl|cribi|Naga_100246g7.10067 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:237389..239424 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6319 ID=rna6319|Name=rna6319|organism=Nannochloropsis gaditana|type=mRNA|length=462bp
ATGGAAGGGCAGGGGCTGGCGAACATGCTCGAGTTTTCCAAGCCACAAAA
ATTGAGAGAGATAAGTCCGTCTTCTGAGATGGGGCGAGACAATAACGAGA
AAGTATATCAATTTCGATACTGGAAAGAAATCCAAGCCGTGAAGAGAATG
TGCAGAAATAAATTTGAGGATCTGGACCAGACGAGCTTGACCGTGCACAA
AGACCCGCCAAACGATTGCAGCCATCAGCCAGCTATACAGGATCCTCCTT
CGCCATCAAATTCTCCCTCGTCTTCGGGTTCGTCCGCCTTGTCGGCGGGG
GGGGGTACAAAGCTATCTCAAGCTCAAAGTGGAACACGGACACGGATTAA
GGAGCTTGAAGAGGAAATTGCATATTGGCATCAGGCTTTCATCGATTTGT
CCGTGACTAATAATGCGCTCCTGTCAGGTATAGTGGCGGATGCGGGCAAT
GAAATGAAATAA back to topprotein sequence of rna6319 >rna6319-protein ID=rna6319-protein|Name=rna6319|organism=Nannochloropsis gaditana|type=polypeptide|length=531bp
MPTEFAGWLAMYHGFRSTLQLPLALKGFLFICDLSDNKSQPPDFVESLIT
AVCSFVRIHVANPTSVTITYPMLVPLKYPYHTNMFEALETAFYCFWRKTA
TIGFRTFVTNFEDELKEQDESVKIGGGLQWDHREVESMEIQHECLHESTR
MRQQQSLEQLPWVKERGKTENHKFRTSEYPPVFSSYNRLSERQLERKPTP
LDADILTFVDTLNHERNEAVSTSFLALPVTDHMLSWSSRSSAEENILPRP
RKMREPISDNSMRKRESKALCLSSMNMVDDNVARLTERTISEPSSAVASI
RQSVSDLPTSAVPALSAELKTDLATFQVEPFMRAWGPLDKKKWENPLSSN
NCNAIEVYGCEMNSDQTVDNASSSAVTSIRKSNLCFDINADCCRCIGYQR
LCGEEINPVSTHIPDPRIDYAKDPVSADVATLSPSTVVKGVMQMRERRSL
DKINAPKTLPLSFFSCLPAESCPYSILPSSTWDLEPSKEESGAENEDEVK
SKKMVGRRRDVCGKGSFASFHSDTATNKMKK back to topmRNA from alignment at CM002468.1:237389..239424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6319 ID=rna6319|Name=rna6319|organism=Nannochloropsis gaditana|type=mRNA|length=2036bp|location=Sequence derived from alignment at CM002468.1:237389..239424- (Nannochloropsis gaditana)
ATGCCAACTGAGGTAAGCTTTATTTCCATGCACAGCATGTGTACCGGTCG
AGATGAAATGACGATTTTCACGGGCTTACTTTCGCATCGATTGCAGCCTA
TGGGTGTTTTTTAAAATATTGTTCATCGATACCATGTTTCTTTCACAGAA
GTCTGACTTGACATGGTGGAATAGTTCGTGCTTTTCACAATTGCCCCTCC
CTCTCACAGTTTGCTGGTTGGTTGGCGATGTACCACGGATTTCGGAGTAC
TCTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCATTTGTGACCTTT
CTGACAACAAATCACAACCTCCGGTAAGTAGGGAAGCTCTCTCTGAGAAA
GTGACGGCGTACAGCGGAATAGCCTGCTCTTCTAACGAATCTAACAGATC
GATTTCCCTTCAATGCATGCAACAAAATTGTTCTTCCCAACGTGGGCACG
TTGGTTCTACGTTCCATGTATAAAAGGACTTCGTGGAATCCCTTATTACG
GCCGTTTGTAGTTTTGTTCGTATACATGTGGCAAACCCGACTAGTGTTAC
AATTACATATCCAATGCTGGTGCCGCTCAAGTATCCGTATCATACGAATA
TGTTCGAGGCCTTGGAAACTGCTTTCTACTGCTTTTGGCGTAAAACTGCA
ACAATAGGTTTTCGGACATTCGTCACCAACTTTGAAGACGAGTTAAAAGA
ACAAGATGAGAGTGTCAAGATCGGGGGGGGGCTTCAATGGGATCACAGAG
AAGTCGAGAGCATGGAAATACAACATGAATGCCTGCACGAATCTACAAGG
ATGCGACAACAGCAATCTCTGGAACAGCTTCCATGGGTAAAAGAACGAGG
GAAGACCGAAAATCACAAGTTCAGGACATCTGAGTATCCGCCAGTTTTCT
CGTCGTATAACAGGCTGTCAGAAAGACAACTGGAGAGAAAGCCTACTCCC
CTTGATGCAGACATTTTGACTTTTGTCGACACGCTTAATCACGAGAGGAA
TGAAGCTGTCTCCACATCATTCCTCGCATTGCCAGTGACCGACCACATGC
TTTCTTGGAGCTCGAGGTCCAGTGCAGAGGAGAACATACTTCCAAGACCC
CGAAAAATGCGCGAACCAATTTCCGACAATAGCATGCGGAAACGCGAGTC
GAAAGCACTTTGTTTATCGTCTATGAATATGGTTGATGATAATGTCGCGC
GGTTGACTGAACGGACAATATCCGAGCCGTCCTCAGCTGTGGCGTCCATA
AGACAATCAGTCAGTGACTTACCCACGTCCGCAGTACCAGCGTTATCAGC
AGAATTAAAAACAGACTTAGCGACATTTCAGGTAGAACCCTTTATGCGTG
CTTGGGGACCTTTGGACAAGAAAAAGTGGGAAAACCCCTTGAGTTCGAAT
AACTGCAACGCTATCGAAGTGTATGGTTGTGAGATGAACTCAGACCAAAC
AGTCGACAATGCTTCTTCTTCTGCTGTGACAAGCATAAGGAAGAGCAACC
TATGTTTTGACATTAATGCAGACTGTTGCAGATGTATCGGGTATCAACGT
CTCTGCGGGGAGGAGATAAATCCTGTCTCTACTCACATACCTGACCCACG
TATAGATTATGCGAAGGATCCAGTATCTGCCGATGGTGAGTATCTTTGAC
TTCTTCCCCTTCTTAAAGGTTTTACTTCGCAACACTAGGCCCATTTAGTA
TCTCCTTCCTTTTCTTCCACCACAGTTGCGACGTTATCACCATCGACGGT
TGTAAAAGGTGTAATGCAGATGCGAGAAAGGAGATCCCTTGATAAAATCA
ATGCTCCGAAAACCTTGCCGCTTTCTTTCTTCTCGTGCCTTCCAGCCGAG
TCTTGCCCTTACTCGATCTTACCATCAAGCACATGGGACCTGGAGCCATC
CAAAGAAGAGAGCGGAGCGGAGAATGAAGATGAAGTGAAGAGCAAGAAAA
TGGTTGGTCGCAGAAGGGATGTCTGCGGAAAGGGATCATTTGCGTCTTTT
CATAGCGATACAGCTACCAACAAGATGAAAAAATGA back to topCoding sequence (CDS) from alignment at CM002468.1:237389..239424- >rna6319 ID=rna6319|Name=rna6319|organism=Nannochloropsis gaditana|type=CDS|length=6384bp|location=Sequence derived from alignment at CM002468.1:237389..239424- (Nannochloropsis gaditana)
TTGCGACGTTATCACCATCGACGGTTGTAAAAGGTGTAATGCAGATGCGA
GAAAGGAGATCCCTTGATAAAATCAATGCTCCGAAAACCTTGCCGCTTTC
TTTCTTCTCGTGCCTTCCAGCCGAGTCTTGCCCTTACTCGATCTTACCAT
CAAGCACATGGGACCTGGAGCCATCCAAAGAAGAGAGCGGAGCGGAGAAT
GAAGATGAAGTGAAGAGCAAGAAAATGGTTGGTCGCAGAAGGGATGTCTG
CGGAAAGGGATCATTTGCGTCTTTTCATAGCGATACAGCTACCAACAAGA
TGAAAAAATGAGACTTCGTGGAATCCCTTATTACGGCCGTTTGTAGTTTT
GTTCGTATACATGTGGCAAACCCGACTAGTGTTACAATTACATATCCAAT
GCTGGTGCCGCTCAAGTATCCGTATCATACGAATATGTTCGAGGCCTTGG
AAACTGCTTTCTACTGCTTTTGGCGTAAAACTGCAACAATAGGTTTTCGG
ACATTCGTCACCAACTTTGAAGACGAGTTAAAAGAACAAGATGAGAGTGT
CAAGATCGGGGGGGGGCTTCAATGGGATCACAGAGAAGTCGAGAGCATGG
AAATACAACATGAATGCCTGCACGAATCTACAAGGATGCGACAACAGCAA
TCTCTGGAACAGCTTCCATGGGTAAAAGAACGAGGGAAGACCGAAAATCA
CAAGTTCAGGACATCTGAGTATCCGCCAGTTTTCTCGTCGTATAACAGGC
TGTCAGAAAGACAACTGGAGAGAAAGCCTACTCCCCTTGATGCAGACATT
TTGACTTTTGTCGACACGCTTAATCACGAGAGGAATGAAGCTGTCTCCAC
ATCATTCCTCGCATTGCCAGTGACCGACCACATGCTTTCTTGGAGCTCGA
GGTCCAGTGCAGAGGAGAACATACTTCCAAGACCCCGAAAAATGCGCGAA
CCAATTTCCGACAATAGCATGCGGAAACGCGAGTCGAAAGCACTTTGTTT
ATCGTCTATGAATATGGTTGATGATAATGTCGCGCGGTTGACTGAACGGA
CAATATCCGAGCCGTCCTCAGCTGTGGCGTCCATAAGACAATCAGTCAGT
GACTTACCCACGTCCGCAGTACCAGCGTTATCAGCAGAATTAAAAACAGA
CTTAGCGACATTTCAGGTAGAACCCTTTATGCGTGCTTGGGGACCTTTGG
ACAAGAAAAAGTGGGAAAACCCCTTGAGTTCGAATAACTGCAACGCTATC
GAAGTGTATGGTTGTGAGATGAACTCAGACCAAACAGTCGACAATGCTTC
TTCTTCTGCTGTGACAAGCATAAGGAAGAGCAACCTATGTTTTGACATTA
ATGCAGACTGTTGCAGATGTATCGGGTATCAACGTCTCTGCGGGGAGGAG
ATAAATCCTGTCTCTACTCACATACCTGACCCACGTATAGATTATGCGAA
GGATCCAGTATCTGCCGATGTTTGCTGGTTGGTTGGCGATGTACCACGGA
TTTCGGAGTACTCTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCAT
TTGTGACCTTTCTGACAACAAATCACAACCTCCGATGCCAACTGAGTTGC
GACGTTATCACCATCGACGGTTGTAAAAGGTGTAATGCAGATGCGAGAAA
GGAGATCCCTTGATAAAATCAATGCTCCGAAAACCTTGCCGCTTTCTTTC
TTCTCGTGCCTTCCAGCCGAGTCTTGCCCTTACTCGATCTTACCATCAAG
CACATGGGACCTGGAGCCATCCAAAGAAGAGAGCGGAGCGGAGAATGAAG
ATGAAGTGAAGAGCAAGAAAATGGTTGGTCGCAGAAGGGATGTCTGCGGA
AAGGGATCATTTGCGTCTTTTCATAGCGATACAGCTACCAACAAGATGAA
AAAATGAGACTTCGTGGAATCCCTTATTACGGCCGTTTGTAGTTTTGTTC
GTATACATGTGGCAAACCCGACTAGTGTTACAATTACATATCCAATGCTG
GTGCCGCTCAAGTATCCGTATCATACGAATATGTTCGAGGCCTTGGAAAC
TGCTTTCTACTGCTTTTGGCGTAAAACTGCAACAATAGGTTTTCGGACAT
TCGTCACCAACTTTGAAGACGAGTTAAAAGAACAAGATGAGAGTGTCAAG
ATCGGGGGGGGGCTTCAATGGGATCACAGAGAAGTCGAGAGCATGGAAAT
ACAACATGAATGCCTGCACGAATCTACAAGGATGCGACAACAGCAATCTC
TGGAACAGCTTCCATGGGTAAAAGAACGAGGGAAGACCGAAAATCACAAG
TTCAGGACATCTGAGTATCCGCCAGTTTTCTCGTCGTATAACAGGCTGTC
AGAAAGACAACTGGAGAGAAAGCCTACTCCCCTTGATGCAGACATTTTGA
CTTTTGTCGACACGCTTAATCACGAGAGGAATGAAGCTGTCTCCACATCA
TTCCTCGCATTGCCAGTGACCGACCACATGCTTTCTTGGAGCTCGAGGTC
CAGTGCAGAGGAGAACATACTTCCAAGACCCCGAAAAATGCGCGAACCAA
TTTCCGACAATAGCATGCGGAAACGCGAGTCGAAAGCACTTTGTTTATCG
TCTATGAATATGGTTGATGATAATGTCGCGCGGTTGACTGAACGGACAAT
ATCCGAGCCGTCCTCAGCTGTGGCGTCCATAAGACAATCAGTCAGTGACT
TACCCACGTCCGCAGTACCAGCGTTATCAGCAGAATTAAAAACAGACTTA
GCGACATTTCAGGTAGAACCCTTTATGCGTGCTTGGGGACCTTTGGACAA
GAAAAAGTGGGAAAACCCCTTGAGTTCGAATAACTGCAACGCTATCGAAG
TGTATGGTTGTGAGATGAACTCAGACCAAACAGTCGACAATGCTTCTTCT
TCTGCTGTGACAAGCATAAGGAAGAGCAACCTATGTTTTGACATTAATGC
AGACTGTTGCAGATGTATCGGGTATCAACGTCTCTGCGGGGAGGAGATAA
ATCCTGTCTCTACTCACATACCTGACCCACGTATAGATTATGCGAAGGAT
CCAGTATCTGCCGATGTTTGCTGGTTGGTTGGCGATGTACCACGGATTTC
GGAGTACTCTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCATTTGT
GACCTTTCTGACAACAAATCACAACCTCCGATGCCAACTGAGTTGCGACG
TTATCACCATCGACGGTTGTAAAAGGTGTAATGCAGATGCGAGAAAGGAG
ATCCCTTGATAAAATCAATGCTCCGAAAACCTTGCCGCTTTCTTTCTTCT
CGTGCCTTCCAGCCGAGTCTTGCCCTTACTCGATCTTACCATCAAGCACA
TGGGACCTGGAGCCATCCAAAGAAGAGAGCGGAGCGGAGAATGAAGATGA
AGTGAAGAGCAAGAAAATGGTTGGTCGCAGAAGGGATGTCTGCGGAAAGG
GATCATTTGCGTCTTTTCATAGCGATACAGCTACCAACAAGATGAAAAAA
TGAGACTTCGTGGAATCCCTTATTACGGCCGTTTGTAGTTTTGTTCGTAT
ACATGTGGCAAACCCGACTAGTGTTACAATTACATATCCAATGCTGGTGC
CGCTCAAGTATCCGTATCATACGAATATGTTCGAGGCCTTGGAAACTGCT
TTCTACTGCTTTTGGCGTAAAACTGCAACAATAGGTTTTCGGACATTCGT
CACCAACTTTGAAGACGAGTTAAAAGAACAAGATGAGAGTGTCAAGATCG
GGGGGGGGCTTCAATGGGATCACAGAGAAGTCGAGAGCATGGAAATACAA
CATGAATGCCTGCACGAATCTACAAGGATGCGACAACAGCAATCTCTGGA
ACAGCTTCCATGGGTAAAAGAACGAGGGAAGACCGAAAATCACAAGTTCA
GGACATCTGAGTATCCGCCAGTTTTCTCGTCGTATAACAGGCTGTCAGAA
AGACAACTGGAGAGAAAGCCTACTCCCCTTGATGCAGACATTTTGACTTT
TGTCGACACGCTTAATCACGAGAGGAATGAAGCTGTCTCCACATCATTCC
TCGCATTGCCAGTGACCGACCACATGCTTTCTTGGAGCTCGAGGTCCAGT
GCAGAGGAGAACATACTTCCAAGACCCCGAAAAATGCGCGAACCAATTTC
CGACAATAGCATGCGGAAACGCGAGTCGAAAGCACTTTGTTTATCGTCTA
TGAATATGGTTGATGATAATGTCGCGCGGTTGACTGAACGGACAATATCC
GAGCCGTCCTCAGCTGTGGCGTCCATAAGACAATCAGTCAGTGACTTACC
CACGTCCGCAGTACCAGCGTTATCAGCAGAATTAAAAACAGACTTAGCGA
CATTTCAGGTAGAACCCTTTATGCGTGCTTGGGGACCTTTGGACAAGAAA
AAGTGGGAAAACCCCTTGAGTTCGAATAACTGCAACGCTATCGAAGTGTA
TGGTTGTGAGATGAACTCAGACCAAACAGTCGACAATGCTTCTTCTTCTG
CTGTGACAAGCATAAGGAAGAGCAACCTATGTTTTGACATTAATGCAGAC
TGTTGCAGATGTATCGGGTATCAACGTCTCTGCGGGGAGGAGATAAATCC
TGTCTCTACTCACATACCTGACCCACGTATAGATTATGCGAAGGATCCAG
TATCTGCCGATGTTTGCTGGTTGGTTGGCGATGTACCACGGATTTCGGAG
TACTCTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCATTTGTGACC
TTTCTGACAACAAATCACAACCTCCGATGCCAACTGAGTTGCGACGTTAT
CACCATCGACGGTTGTAAAAGGTGTAATGCAGATGCGAGAAAGGAGATCC
CTTGATAAAATCAATGCTCCGAAAACCTTGCCGCTTTCTTTCTTCTCGTG
CCTTCCAGCCGAGTCTTGCCCTTACTCGATCTTACCATCAAGCACATGGG
ACCTGGAGCCATCCAAAGAAGAGAGCGGAGCGGAGAATGAAGATGAAGTG
AAGAGCAAGAAAATGGTTGGTCGCAGAAGGGATGTCTGCGGAAAGGGATC
ATTTGCGTCTTTTCATAGCGATACAGCTACCAACAAGATGAAAAAATGAG
ACTTCGTGGAATCCCTTATTACGGCCGTTTGTAGTTTTGTTCGTATACAT
GTGGCAAACCCGACTAGTGTTACAATTACATATCCAATGCTGGTGCCGCT
CAAGTATCCGTATCATACGAATATGTTCGAGGCCTTGGAAACTGCTTTCT
ACTGCTTTTGGCGTAAAACTGCAACAATAGGTTTTCGGACATTCGTCACC
AACTTTGAAGACGAGTTAAAAGAACAAGATGAGAGTGTCAAGATCGGGGG
GGGGCTTCAATGGGATCACAGAGAAGTCGAGAGCATGGAAATACAACATG
AATGCCTGCACGAATCTACAAGGATGCGACAACAGCAATCTCTGGAACAG
CTTCCATGGGTAAAAGAACGAGGGAAGACCGAAAATCACAAGTTCAGGAC
ATCTGAGTATCCGCCAGTTTTCTCGTCGTATAACAGGCTGTCAGAAAGAC
AACTGGAGAGAAAGCCTACTCCCCTTGATGCAGACATTTTGACTTTTGTC
GACACGCTTAATCACGAGAGGAATGAAGCTGTCTCCACATCATTCCTCGC
ATTGCCAGTGACCGACCACATGCTTTCTTGGAGCTCGAGGTCCAGTGCAG
AGGAGAACATACTTCCAAGACCCCGAAAAATGCGCGAACCAATTTCCGAC
AATAGCATGCGGAAACGCGAGTCGAAAGCACTTTGTTTATCGTCTATGAA
TATGGTTGATGATAATGTCGCGCGGTTGACTGAACGGACAATATCCGAGC
CGTCCTCAGCTGTGGCGTCCATAAGACAATCAGTCAGTGACTTACCCACG
TCCGCAGTACCAGCGTTATCAGCAGAATTAAAAACAGACTTAGCGACATT
TCAGGTAGAACCCTTTATGCGTGCTTGGGGACCTTTGGACAAGAAAAAGT
GGGAAAACCCCTTGAGTTCGAATAACTGCAACGCTATCGAAGTGTATGGT
TGTGAGATGAACTCAGACCAAACAGTCGACAATGCTTCTTCTTCTGCTGT
GACAAGCATAAGGAAGAGCAACCTATGTTTTGACATTAATGCAGACTGTT
GCAGATGTATCGGGTATCAACGTCTCTGCGGGGAGGAGATAAATCCTGTC
TCTACTCACATACCTGACCCACGTATAGATTATGCGAAGGATCCAGTATC
TGCCGATGTTTGCTGGTTGGTTGGCGATGTACCACGGATTTCGGAGTACT
CTACAACTACCCCTAGCCCTTAAAGGATTTTTATTCATTTGTGACCTTTC
TGACAACAAATCACAACCTCCGATGCCAACTGAG back to top
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