EWM24372.1, cds6304 (CDS) Nannochloropsis gaditana

Overview
NameEWM24372.1
Unique Namecds6304
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:239413..239424 -
Alignment locationCM002468.1:239102..239215 -
Alignment locationCM002468.1:237790..238948 -
Alignment locationCM002468.1:237389..237699 -

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Properties
Property NameValue
Protein idEWM24372.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100246g7.10067.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:239413..239424 -
CM002468.1supercontigCM002468.1:239102..239215 -
CM002468.1supercontigCM002468.1:237790..238948 -
CM002468.1supercontigCM002468.1:237389..237699 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24372.1 vs. NCBI_GenBank
Match: gi|585105769|gb|EWM24372.1| (hypothetical protein Naga_100246g7 [Nannochloropsis gaditana])

HSP 1 Score: 1107.05 bits (2862), Expect = 0.000e+0
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0 
Query:    1 MPTEFAGWLAMYHGFRSTLQLPLALKGFLFICDLSDNKSQPPDFVESLITAVCSFVRIHVANPTSVTITYPMLVPLKYPYHTNMFEALETAFYCFWRKTATIGFRTFVTNFEDELKEQDESVKIGGGLQWDHREVESMEIQHECLHESTRMRQQQSLEQLPWVKERGKTENHKFRTSEYPPVFSSYNRLSERQLERKPTPLDADILTFVDTLNHERNEAVSTSFLALPVTDHMLSWSSRSSAEENILPRPRKMREPISDNSMRKRESKALCLSSMNMVDDNVARLTERTISEPSSAVASIRQSVSDLPTSAVPALSAELKTDLATFQVEPFMRAWGPLDKKKWENPLSSNNCNAIEVYGCEMNSDQTVDNASSSAVTSIRKSNLCFDINADCCRCIGYQRLCGEEINPVSTHIPDPRIDYAKDPVSADVATLSPSTVVKGVMQMRERRSLDKINAPKTLPLSFFSCLPAESCPYSILPSSTWDLEPSKEESGAENEDEVKSKKMVGRRRDVCGKGSFASFHSDTATNKMKK 531
            MPTEFAGWLAMYHGFRSTLQLPLALKGFLFICDLSDNKSQPPDFVESLITAVCSFVRIHVANPTSVTITYPMLVPLKYPYHTNMFEALETAFYCFWRKTATIGFRTFVTNFEDELKEQDESVKIGGGLQWDHREVESMEIQHECLHESTRMRQQQSLEQLPWVKERGKTENHKFRTSEYPPVFSSYNRLSERQLERKPTPLDADILTFVDTLNHERNEAVSTSFLALPVTDHMLSWSSRSSAEENILPRPRKMREPISDNSMRKRESKALCLSSMNMVDDNVARLTERTISEPSSAVASIRQSVSDLPTSAVPALSAELKTDLATFQVEPFMRAWGPLDKKKWENPLSSNNCNAIEVYGCEMNSDQTVDNASSSAVTSIRKSNLCFDINADCCRCIGYQRLCGEEINPVSTHIPDPRIDYAKDPVSADVATLSPSTVVKGVMQMRERRSLDKINAPKTLPLSFFSCLPAESCPYSILPSSTWDLEPSKEESGAENEDEVKSKKMVGRRRDVCGKGSFASFHSDTATNKMKK
Sbjct:    1 MPTEFAGWLAMYHGFRSTLQLPLALKGFLFICDLSDNKSQPPDFVESLITAVCSFVRIHVANPTSVTITYPMLVPLKYPYHTNMFEALETAFYCFWRKTATIGFRTFVTNFEDELKEQDESVKIGGGLQWDHREVESMEIQHECLHESTRMRQQQSLEQLPWVKERGKTENHKFRTSEYPPVFSSYNRLSERQLERKPTPLDADILTFVDTLNHERNEAVSTSFLALPVTDHMLSWSSRSSAEENILPRPRKMREPISDNSMRKRESKALCLSSMNMVDDNVARLTERTISEPSSAVASIRQSVSDLPTSAVPALSAELKTDLATFQVEPFMRAWGPLDKKKWENPLSSNNCNAIEVYGCEMNSDQTVDNASSSAVTSIRKSNLCFDINADCCRCIGYQRLCGEEINPVSTHIPDPRIDYAKDPVSADVATLSPSTVVKGVMQMRERRSLDKINAPKTLPLSFFSCLPAESCPYSILPSSTWDLEPSKEESGAENEDEVKSKKMVGRRRDVCGKGSFASFHSDTATNKMKK 531
The following BLAST results are available for this feature:
BLAST of EWM24372.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105769|gb|EWM24372.1|0.000e+0100.00hypothetical protein Naga_100246g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6319rna6319Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications