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Properties
| Property Name | Value |
|---|
| Product | putative domain XH |
| Orig transcript id | gnl|cribi|Naga_100246g9.10059.mrna |
| Orig protein id | gnl|cribi|Naga_100246g9.10059 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:235717..236553 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6317 ID=rna6317|Name=rna6317|organism=Nannochloropsis gaditana|type=mRNA|length=1683bp
GCGTGATAGTGTCGCTCACATGTGACCTGCATGCTTGTGTGGGGTTTTAA
CAGGTGCTGAATAAGAGCTTGTCGTCATTTTTATAAATTTTGATGCGATT
CTGTGGAGTTGTGAGGGACGTAATACACAACCCTGTCTTTGTTCCGCAAA
TGCATACCAGGTAGTTTGACCACGTCGAAACCCGGTTACAAGAAAGTGCT
GCTACGATGCGCGCGCACATCCACGCACTGGCCCTGTTAGCATTGATGGC
TGGAGCGTTGGGTTTCCAGGTACGTGAGCTATTTGTAATTTTCATGCCTC
TTGCGTTAGTCCCGATGTGGCCGTTTGATCCCTTGCTCTACCTCCCCCCC
CCCCAGATCCCAATGACGATGAAAGCTCCTGGTGCTGGAAAGAAGGTCCT
TATCATTGGAGGGACACGTTTCAGTGGCTTATACCTCTTCAAAGAACTCC
ATGACCGGGGCTACGACATCACGCTTTTCAACAGGGGTAAGACAGCGAAC
CGCCCGGTTCCAGGAGAGAGCGCCGAGTCATATGCAGAGCGGATCGGTCA
AGCCACGTTTGTGAAGGGGGATCGCACCAATCCCGATGACCTCGCTGCAC
TCGCCAAGGCGCATGAATTTGACGTCATATACGACATGAACGGGAGAGAG
AAAACGGACACGCAGCCATTGGCCGACGCGTATAATGGCAGAGTGGACCA
TTTCGTCTACATGTCTTCGGCAGGCGTCTACTTGAAAAGCGACTTGATGC
CTCACAAGGAGACCGACCCCGTCGACCCCAAGTCCCGACACAAAGGGAAA
TTCGAAACCGAAACGTATTTGGCGGAAAAAGGCCTTCCTTTCACGTCTAT
TCGGCCCACCTACATTTACGGTCCTCAAAACTACAACCCTCTCGAGGAAT
ACTTCTTTCATCGTGTCGTGGCCGGGAGAGCGGTGGCCGTTCCAGGGCAT
GGGCAGCACTTGACGGGCTTGGGCCATGTCAAAGATCTGGCCACGGCGAT
GGCGCAAGTGATCGGGCGGGAGCAGGCCAAAGGGCAGGTCTACAATGTCC
AGCACCCGCAAGCCATTACCTTCGACGGTGCCGTGCGACTGGCCGCCAAG
GCCGCTGGGAAAGATCCGGAGAGCGTGGAAATCGTTCATTATGACCCCAA
GGAGTATGATTTCGGCAAGAAAAAGGCATTCCCGATGCGGCCTCAACATT
TTTTTACGAGCGTGGAAAAAGCCATGCGAGATCTGGATTGGACGCCGGCC
TACGGGAATACGGAGGGGTGGCAAGACTCTTTCGACCAAGATTATGCCTT
AAGGACACATGAACCAGATTTCGAATGTGATGAGGTGGTCCTGGCAGGAA
AGAAATAATGAAGAAAGGAGGGACAGAAGGATGGTGAAAGTCCTAGAAAA
AGTGCGAGGGAAGCACGCGCTTGTGCGGTGGTTCGCGCTGTTTCGGGGAA
AAGGGGCTTCATCTTATAGTCGTGGTAGAGTATTTGCATATCTGCGGGAA
ACCGCCGAGTCGAGGAGCGGACTCGACGAGATCTCCCGTATGAGACTAGC
GTAAAAGCGCGCGAAACGGTTAAGGGACTGCAGTGGTATATTAAAGAAGA
CTCGTCGGGAAAACAAGGTAGATGCCTTGCTCATCCGTTCGATAACGGCT
GTTTGCCCCTTTTTCCGACCCACGAAACAGTAC back to topprotein sequence of rna6317 >rna6317-protein ID=rna6317-protein|Name=rna6317|organism=Nannochloropsis gaditana|type=polypeptide|length=244bp
MPSCVTPSPLFDSYILVLFSCGTLIPSVFTPVGPFGWKFKLNEAKHILVE
AGTAELSDIIPVHVFCEATYEEVEKALIKDVRLPQLISSPKGGKNVDNNT
SSITTTDAVTTRSRKRAASRKKGKQICRSALVYRALDAVDSLVRDATFDP
FHRQHGRIIGTNHSHKLLLSLCEEWGPAMADLVVLKKEEIEKFCPSGHYP
TPVLWKEGKEVTIGAVVRRMVEVLRETRNTKDRDKVRKREREQE back to topmRNA from alignment at CM002468.1:235717..236553- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6317 ID=rna6317|Name=rna6317|organism=Nannochloropsis gaditana|type=mRNA|length=837bp|location=Sequence derived from alignment at CM002468.1:235717..236553- (Nannochloropsis gaditana)
ATGCCCTCTTGTGTTACCCCATCCCCGCTCTTCGACTCTTATATATTGGT
ACTTTTCTCATGTGGGACCCTCATACCTTCGGTTTTTACACCCGTGGGGC
CTTTTGGATGGAAATTTAGTTGTACTTGAAGTTCTTGATTGTCTTTTCCT
TATGAACCATTATTTCTTTCCCCCTCCCTCTGTACCACTCTTTTCTATCA
CCTCACATGTTTTTGGGCAGAATTAAATGAGGCCAAGCATATTTTGGTCG
AGGCTGGCACTGCTGAACTCTCCGACATCATCCCTGTCCATGTTTTTTGC
GAAGCGACTTACGAGGAAGTGGAGAAGGCCCTCATTAAAGATGTGCGCCT
CCCTCAGTTGATTTCCAGCCCTAAGGGTGGTAAGAATGTTGACAATAACA
CGTCAAGTATAACAACGACTGACGCCGTCACCACTCGCAGTAGGAAAAGA
GCGGCAAGCAGAAAGAAGGGGAAACAAATTTGCAGGAGTGCTCTCGTGTA
TCGAGCACTAGATGCAGTGGATTCACTTGTAAGAGACGCAACATTTGATC
CCTTTCATCGGCAGCACGGTCGAATTATTGGGACAAATCACTCCCACAAG
CTGCTTCTATCTCTATGCGAAGAGTGGGGCCCTGCCATGGCGGACTTGGT
GGTCTTGAAGAAGGAAGAAATTGAAAAATTTTGTCCCTCTGGGCATTATC
CAACACCGGTCTTGTGGAAGGAAGGAAAAGAGGTTACGATAGGTGCTGTA
GTACGTCGCATGGTAGAAGTCTTGAGGGAGACACGAAATACGAAAGACAG
AGATAAAGTAAGAAAGAGAGAGAGGGAGCAAGAGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:235717..236553- >rna6317 ID=rna6317|Name=rna6317|organism=Nannochloropsis gaditana|type=CDS|length=1470bp|location=Sequence derived from alignment at CM002468.1:235717..236553- (Nannochloropsis gaditana)
AATTAAATGAGGCCAAGCATATTTTGGTCGAGGCTGGCACTGCTGAACTC
TCCGACATCATCCCTGTCCATGTTTTTTGCGAAGCGACTTACGAGGAAGT
GGAGAAGGCCCTCATTAAAGATGTGCGCCTCCCTCAGTTGATTTCCAGCC
CTAAGGGTGGTAAGAATGTTGACAATAACACGTCAAGTATAACAACGACT
GACGCCGTCACCACTCGCAGTAGGAAAAGAGCGGCAAGCAGAAAGAAGGG
GAAACAAATTTGCAGGAGTGCTCTCGTGTATCGAGCACTAGATGCAGTGG
ATTCACTTGTAAGAGACGCAACATTTGATCCCTTTCATCGGCAGCACGGT
CGAATTATTGGGACAAATCACTCCCACAAGCTGCTTCTATCTCTATGCGA
AGAGTGGGGCCCTGCCATGGCGGACTTGGTGGTCTTGAAGAAGGAAGAAA
TTGAAAAATTTTGTCCCTCTGGGCATTATCCAACACCGGTCTTGTGGAAG
GAAGGAAAAGAGGTTACGATAGGTGCTGTAGTACGTCGCATGGTAGAAGT
CTTGAGGGAGACACGAAATACGAAAGACAGAGATAAAGTAAGAAAGAGAG
AGAGGGAGCAAGAGTGAATGCCCTCTTGTGTTACCCCATCCCCGCTCTTC
GACTCTTATATATTGGTACTTTTCTCATGTGGGACCCTCATACCTTCGGT
TTTTACACCCGTGGGGCCTTTTGGATGGAAATTTAAATTAAATGAGGCCA
AGCATATTTTGGTCGAGGCTGGCACTGCTGAACTCTCCGACATCATCCCT
GTCCATGTTTTTTGCGAAGCGACTTACGAGGAAGTGGAGAAGGCCCTCAT
TAAAGATGTGCGCCTCCCTCAGTTGATTTCCAGCCCTAAGGGTGGTAAGA
ATGTTGACAATAACACGTCAAGTATAACAACGACTGACGCCGTCACCACT
CGCAGTAGGAAAAGAGCGGCAAGCAGAAAGAAGGGGAAACAAATTTGCAG
GAGTGCTCTCGTGTATCGAGCACTAGATGCAGTGGATTCACTTGTAAGAG
ACGCAACATTTGATCCCTTTCATCGGCAGCACGGTCGAATTATTGGGACA
AATCACTCCCACAAGCTGCTTCTATCTCTATGCGAAGAGTGGGGCCCTGC
CATGGCGGACTTGGTGGTCTTGAAGAAGGAAGAAATTGAAAAATTTTGTC
CCTCTGGGCATTATCCAACACCGGTCTTGTGGAAGGAAGGAAAAGAGGTT
ACGATAGGTGCTGTAGTACGTCGCATGGTAGAAGTCTTGAGGGAGACACG
AAATACGAAAGACAGAGATAAAGTAAGAAAGAGAGAGAGGGAGCAAGAGT
GAATGCCCTCTTGTGTTACCCCATCCCCGCTCTTCGACTCTTATATATTG
GTACTTTTCTCATGTGGGACCCTCATACCTTCGGTTTTTACACCCGTGGG
GCCTTTTGGATGGAAATTTA back to top
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