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Properties
| Property Name | Value |
|---|
| Product | dna mismatch repair protein |
| Orig transcript id | gnl|cribi|Naga_100246g12.10062.mrna |
| Orig protein id | gnl|cribi|Naga_100246g12.10062 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:228762..230594 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6313 ID=rna6313|Name=rna6313|organism=Nannochloropsis gaditana|type=mRNA|length=2841bp
TCCGTGTCCACTCCTCCCGTTTCCTCCGCCGCTGGCTTCTCACACCGCCT
CCCTACCACCTGGCCGACGCCATGCAAGCCCTCTGCCGGCACCTCGCCCG
GCCCCCTCCCTCTAGCCCGGCCTCCCCCACGTCTTCTACCCCTTCTTCCA
CACCCGTCGTAGGCGCGGCTCCACCCCTCTGCAAACCCGTCGGCGTCGGG
AAGATGGTCGCGATGTTGAGCATGGGCCAGGGAAACGTCCCCCTCTTCCG
CGATTTGGCCGGGTGTTTGCAGGGTCTATTGGTGGTGTTGGGGGAAGGCG
GGAAGGAGGAAGGGGGCACTTCCGTCTTTCGGGAGGTACTGCCAAGTTTG
CGGGCCATTGTGGCGTATGAGAGTGGGATGGAAGTTGCGGAAGAGGAGTT
GCGCGTGCGGGGAAAGGCAGCCCTGGCGGCGATTGAAGATGTGGTCATTC
CGGCCACGGTGGAGGATTTGCCCTCCCTCCCGTCCTCCTTCGCGTCCTCT
ACCTCGACCTTGTCTTCGTCGCCTTTGCCTATGACTGCGTTGCAAGGAGC
GACTGACGGACACGACGTCGACGCAAATCGTGGGGAGACGCTCGAGCCAT
CCATTAAATCAACGGTCGCGACCGTGCCCGCTGTTTTTTTCGAGCGGAAC
GAAGAAACCTTCCGCAATACCGTCCGGCCCACCCACCCCTTGGTTCTCGA
GCCATTTGCTCGGGTGAAAGAATCAGCTGCTGCCTTGTGTCGGGCGGTCG
CCCAAGACTTCGACCCGGGCGCCGACGTGACAGTGGACCCTCTGAACAAT
GCCGTGATGATGAAAAAAATACCCGCTCCCTCCTTCCGCTCTCCCCTTTC
TCCTCGCGGCCCCTCGCCCACCGCCACCTCAACCGAGACCAGCACTGGCT
ATATCCACCCCACGGACCGGCACCGAAAACCGTTATCGAGCCGTTACACA
ACCGTTCGAGTCGAAACCGCCCTGAACGACTACCTGCAGGCCTGCGGACA
GGCGACAGTGGCGGTGCGACGAGCCCTCCAGTCCCTTTCCTCCACCCTTC
GGTCCGATCTGCCCACTTTGATCACAGCCACCCATATGGCTGTAGTCCTT
CAAGCCGCGGCCGCCCACGTGGCAGCCGCGAAGCAAAAGGGATGGACGCT
GCCCACATTGCTCTCCTTTTCGGACAGCGACTGCGATGGGAAAGAAGGCG
ACCGAGGGCTTTCTCCCTCCACCCCTGCCGTCACCCCGGCCTCTCATCCC
TTGGGCCCGCCCTCCCGCCCGTCCTGGCGCATGAGGCTTCCCAACCTCAC
GCCCTACTGGCTGAGTCGAAACAGTGGGGGTGTGAGCAGTAGCGTCGACT
TGGATGGCCTATTCCTGTTGACAGCGCCGAACATGAGCGGAAAGAGCACC
CTGATGCGTTCTATCGCCGTGGCTGCTCTCTTGGGGAATGCCGGCCTTTT
CGTTCCCTGTATGACCGGCAAGGAAGGGTTCGAGGACGTGAGGGAGGGCG
GGGGGCAGGGCGGGTTGTGTGGAAAACGAAGGAAGTTTCAAGAAGGCGGG
CCGGGTGCGGGAAGGAAGAGCGTTGTGATTCCACGCTTCGACCATCTCTT
CTTGCGCACGGCCAGCTACGACGTTCCTTCGGAAGGAAAGTCGGCGTTTG
CCTTGGAAATGGATGACGTGCGCGTTTTGTTGCGGGACAGCACGTCTCGG
TCGCTGGTCTTCCTGGACGAGTTGGGGAAAGGTACCTCGGCGAGGGAGGG
AGCCGCCTTGTCCGGAGCCTTGATCGAAGCGTTGGACGCTGTGCCAGTGA
CAGGGATATTTGCTACCCATTTGCACGAAATCTTCGACCTGCCGTTGCAG
ACCAGTGATCGCGTCCGCTGGAAGAGGATGGGGTTCGAGGAAGACGTGGT
GGAGGGCGGGGAGGAGGGGCCGCAGGAGAGGCGCGTGAGGTGGACGTACC
AGCTGGAAGATGGTCGGTGCTTGGACTCCATGGCCTGGTACACCGCTCGA
AAATTTGGGATTCCGGAGACGATCCTGGCCAGAGCCCAGGTCCTGGGGAA
GGAATTCGACGCATCGTGTCGGGGGCGAGGAGACAGCAAGGAAGACGGGA
AGGGGGGGGGCTGGCGGGACTCGAGGGGGGGGCTTGGAGAAGGGATTGGG
CGTGGGGAAGACAAGATGAGAGAGGCAGGATGCGAGCTTGATAGGACTTG
GGTCGAGGAGTCGATGACATTGGAGGGCGCAGCCGAAGTCCTGGCCTCCA
TTTTTCGCGGGTACCACAGCTCCTCCTCCAACTCCCTCCCTCCCTCTCTC
CCGCCCTCCCTCCCGCCCTTTCTACGCGTCCCTCCCGGCAACGAGCCGTC
TCCGTCATTGGAAGGCAGCGCTTGTCTCTACGTCCTCCTCTACCCTCCCC
CTTCCTCCGCCCTCCTCACTCCCCCCTCCTTCTACGTGGGTGAGACGGAA
AGCGCCCGCCAACGGCTCGCCCAACACCGGGCCACGCACAAAAAGAAGTC
TCGAATACCGGAGTCCGACTTGGAGGCGTTGTTCGTTCCTGTGGCTTCCA
AGACAGAGGCTCGGAACCTGGAGGCCCTCGTCATCAATGCCTTGGCCAGG
CGGGGGTTCCCCCTGTCGTCGGAGGCAGATGGACGGAGGGCGGTGGGGAA
GTGAGGAGGGCAGAGCGGGGATCAGGGAAAGGCCCTAAATTTAGAGAGAT
GTGTGTACAAAAAAAAGCGAGAGAAACGGAAAGTAGGTGTATGCGTAGGG
GAGTGCGGGGACGTGGGGTTAGCGGGCGTCCGGAGGGCATTCACAGCAAG
AAGCACAAGTGCGAGTAAAATGCGGTGACAGAGCACCAGGC back to topprotein sequence of rna6313 >rna6313-protein ID=rna6313-protein|Name=rna6313|organism=Nannochloropsis gaditana|type=polypeptide|length=418bp
MEVSSRPVARHLLFCFFLSALLLHVQLPTATTTTNIMLSCAVRKHVPHIS
GFRTRLCFAPWRLRETATSTSHRRPSSSLDRVAPSHVLRVSSRSSSSSNS
NEQARKGPGRSKATSKSPPRGAKRGGKSSRSLSSASSSMASPENERAVAD
IIGKRTEAGKKAGGLEGSLVRERDMLISEDAGRMAPREEEKAENDDASDG
GKSQHGSNQSLPLLLLPSSPPSPFTSPSPPPSSPFDLPDDHLAGHLQRLY
AGSQPPSPSSSLGPDTLHPYWLKRLSMLQRPAARALVSQILPTNPLGFDA
GPTLSQRRGTLYDFVLTQKKAHPEKVILTRVGEFYETYGVDAIMLVEYAG
LNPMGNKAKAGCPVKNVQATLDGLTSAGLTVAVIEEISDLDSASPRTSKL
KSRLLSQIVSPGASTYLP back to topmRNA from alignment at CM002468.1:228762..230594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6313 ID=rna6313|Name=rna6313|organism=Nannochloropsis gaditana|type=mRNA|length=1833bp|location=Sequence derived from alignment at CM002468.1:228762..230594- (Nannochloropsis gaditana)
ATGGAGGTCTCGTCTCGACCCGTCGCCCGTCATTTGCTCTTTTGCTTCTT
CCTTTCCGCTCTCCTTCTCCACGTACAACTGCCCACTGCGACCACCACGA
CAAATATCATGCTTTCATGTGCCGTGCGTAAGCATGTCCCGCATATTTCT
GGATTTCGCACTCGGTTATGCTTTGCGCCGTGGCGACTCCGAGAGACCGC
AACTTCCACCTCCCACCGTCGTCCGTCCTCCTCCCTGGACCGAGTAGCGC
CATCCCACGTTCTAAGAGTATCAAGCAGGAGCAGCAGTAGTAGTAATAGT
AATGAGCAGGCTAGGAAAGGGCCGGGGAGATCGAAAGCCACATCGAAATC
TCCGCCTCGAGGCGCGAAACGTGGTGGGAAAAGTAGCCGCTCCTTGTCCA
GTGCATCTTCCTCCATGGCGTCCCCGGAAAACGAGAGGGCCGTGGCCGAC
ATCATCGGGAAAAGGACGGAGGCCGGGAAGAAGGCGGGCGGCCTGGAGGG
GTCGCTGGTCCGGGAGAGGGATATGTTGATCTCAGAGGACGCGGGTAGAA
TGGCGCCCCGGGAGGAGGAAAAGGCCGAGAACGATGACGCAAGCGACGGC
GGGAAGAGCCAGCATGGCAGCAATCAATCACTACCTCTCCTTCTTTTACC
ATCTTCTCCCCCCTCGCCTTTCACCAGTCCCTCCCCTCCTCCCTCCTCCC
CTTTCGATCTGCCCGACGACCACCTCGCTGGTCACCTTCAACGCCTCTAC
GCCGGCAGCCAACCGCCTTCCCCTTCCTCCTCTCTGGGCCCTGATACCTT
GCATCCCTACTGGTTGAAGCGCTTGTCGATGCTTCAACGTCCGGCGGCGC
GGGCGCTGGTGTCGCAGATCCTCCCCACGAACCCTTTGGGCTTCGATGCC
GGCCCCACTCTGTCCCAGCGGCGCGGCACTCTCTACGACTTTGTGCTCAC
GCAAAAAAAAGCCCACCCTGAAAAAGTGATCTTGACCCGGGTGGGTGAAT
TCTACGAGACCTACGGCGTGGATGCTATCATGCTGGTCGAATACGCAGGT
CCGTCCCACAGGCCCCCCCCTCTCGGTCCTATTCTTGCTATACGACACCC
GTTGCCATGTTTTGCATGTCACTGGCCGTGGCGTTGTACCACCCGTTATT
CTTCGTCTTTATCTCTTTGTCTCTTCCGGACCCTCACGCTCCACCTTCCC
CCCCTCCGGGTCCTCCCTCCAGGGCTCAACCCCATGGGGAACAAGGCCAA
GGCGGGCTGCCCCGTCAAGAACGTGCAGGCGACCCTCGATGGCCTCACGT
CCGCGGGCCTCACTGTCGCTGTGATAGAGGTACGCATGCCTCTTTTCCCC
CCTCTTTTCCCTCTTCCTCCAACTTTTGCTTCTTTTTGTCTGCTGTCGTG
CCTGCCTCCTGCTTGACTCCTGTCCCATGCCCGTGGGACCGCACCACGGA
GCGCTCGGGCCAATGTCTTCTTTCAAACCCAACCGATCGTAATCCCCCCA
ACATCTCTTGTGCACGCGGCTTGTAGGAAATAAGCGATTTGGATTCCGCT
TCCCCCCGAACCAGCAAGCTCAAAAGTCGCCTGCTCTCCCAAATCGTCTC
CCCGGGCGCTTCAACTTACCTGTATGACTGCTGTCTACGACCCGACGACG
TCGAATACCCCGAGAACCGGCCTTTTCTGGGTTTATTGAACCTGCCCAGC
AACGGTTACACCCTGGTGGAAGTGCACGTGGACGCACAGACGGCGCGTAT
CACTGAGGGCCTGACGGAGGAAGGGGTCAAAATGATGCTGCTGGCGGGGG
GAATGGCGGAACCCCTCTACACCCAGGCCGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:228762..230594- >rna6313 ID=rna6313|Name=rna6313|organism=Nannochloropsis gaditana|type=CDS|length=5028bp|location=Sequence derived from alignment at CM002468.1:228762..230594- (Nannochloropsis gaditana)
GCCGTGAGAAATAAGCGATTTGGATTCCGCTTCCCCCCGAACCAGCAAGC
TCAAAAGTCGCCTGCTCTCCCAAATCGTCTCCCCGGGCGCTTCAACTTAC
CTGGCTCAACCCCATGGGGAACAAGGCCAAGGCGGGCTGCCCCGTCAAGA
ACGTGCAGGCGACCCTCGATGGCCTCACGTCCGCGGGCCTCACTGTCGCT
GTGATAGAGATGGAGGTCTCGTCTCGACCCGTCGCCCGTCATTTGCTCTT
TTGCTTCTTCCTTTCCGCTCTCCTTCTCCACGTACAACTGCCCACTGCGA
CCACCACGACAAATATCATGCTTTCATGTGCCGTGCGTAAGCATGTCCCG
CATATTTCTGGATTTCGCACTCGGTTATGCTTTGCGCCGTGGCGACTCCG
AGAGACCGCAACTTCCACCTCCCACCGTCGTCCGTCCTCCTCCCTGGACC
GAGTAGCGCCATCCCACGTTCTAAGAGTATCAAGCAGGAGCAGCAGTAGT
AGTAATAGTAATGAGCAGGCTAGGAAAGGGCCGGGGAGATCGAAAGCCAC
ATCGAAATCTCCGCCTCGAGGCGCGAAACGTGGTGGGAAAAGTAGCCGCT
CCTTGTCCAGTGCATCTTCCTCCATGGCGTCCCCGGAAAACGAGAGGGCC
GTGGCCGACATCATCGGGAAAAGGACGGAGGCCGGGAAGAAGGCGGGCGG
CCTGGAGGGGTCGCTGGTCCGGGAGAGGGATATGTTGATCTCAGAGGACG
CGGGTAGAATGGCGCCCCGGGAGGAGGAAAAGGCCGAGAACGATGACGCA
AGCGACGGCGGGAAGAGCCAGCATGGCAGCAATCAATCACTACCTCTCCT
TCTTTTACCATCTTCTCCCCCCTCGCCTTTCACCAGTCCCTCCCCTCCTC
CCTCCTCCCCTTTCGATCTGCCCGACGACCACCTCGCTGGTCACCTTCAA
CGCCTCTACGCCGGCAGCCAACCGCCTTCCCCTTCCTCCTCTCTGGGCCC
TGATACCTTGCATCCCTACTGGTTGAAGCGCTTGTCGATGCTTCAACGTC
CGGCGGCGCGGGCGCTGGTGTCGCAGATCCTCCCCACGAACCCTTTGGGC
TTCGATGCCGGCCCCACTCTGTCCCAGCGGCGCGGCACTCTCTACGACTT
TGTGCTCACGCAAAAAAAAGCCCACCCTGAAAAAGTGATCTTGACCCGGG
TGGGTGAATTCTACGAGACCTACGGCGTGGATGCTATCATGCTGGTCGAA
TACGCAGGCCGTGAGAAATAAGCGATTTGGATTCCGCTTCCCCCCGAACC
AGCAAGCTCAAAAGTCGCCTGCTCTCCCAAATCGTCTCCCCGGGCGCTTC
AACTTACCTGGCTCAACCCCATGGGGAACAAGGCCAAGGCGGGCTGCCCC
GTCAAGAACGTGCAGGCGACCCTCGATGGCCTCACGTCCGCGGGCCTCAC
TGTCGCTGTGATAGAGATGGAGGTCTCGTCTCGACCCGTCGCCCGTCATT
TGCTCTTTTGCTTCTTCCTTTCCGCTCTCCTTCTCCACGTACAACTGCCC
ACTGCGACCACCACGACAAATATCATGCTTTCATGTGCCGTGCGTAAGCA
TGTCCCGCATATTTCTGGATTTCGCACTCGGTTATGCTTTGCGCCGTGGC
GACTCCGAGAGACCGCAACTTCCACCTCCCACCGTCGTCCGTCCTCCTCC
CTGGACCGAGTAGCGCCATCCCACGTTCTAAGAGTATCAAGCAGGAGCAG
CAGTAGTAGTAATAGTAATGAGCAGGCTAGGAAAGGGCCGGGGAGATCGA
AAGCCACATCGAAATCTCCGCCTCGAGGCGCGAAACGTGGTGGGAAAAGT
AGCCGCTCCTTGTCCAGTGCATCTTCCTCCATGGCGTCCCCGGAAAACGA
GAGGGCCGTGGCCGACATCATCGGGAAAAGGACGGAGGCCGGGAAGAAGG
CGGGCGGCCTGGAGGGGTCGCTGGTCCGGGAGAGGGATATGTTGATCTCA
GAGGACGCGGGTAGAATGGCGCCCCGGGAGGAGGAAAAGGCCGAGAACGA
TGACGCAAGCGACGGCGGGAAGAGCCAGCATGGCAGCAATCAATCACTAC
CTCTCCTTCTTTTACCATCTTCTCCCCCCTCGCCTTTCACCAGTCCCTCC
CCTCCTCCCTCCTCCCCTTTCGATCTGCCCGACGACCACCTCGCTGGTCA
CCTTCAACGCCTCTACGCCGGCAGCCAACCGCCTTCCCCTTCCTCCTCTC
TGGGCCCTGATACCTTGCATCCCTACTGGTTGAAGCGCTTGTCGATGCTT
CAACGTCCGGCGGCGCGGGCGCTGGTGTCGCAGATCCTCCCCACGAACCC
TTTGGGCTTCGATGCCGGCCCCACTCTGTCCCAGCGGCGCGGCACTCTCT
ACGACTTTGTGCTCACGCAAAAAAAAGCCCACCCTGAAAAAGTGATCTTG
ACCCGGGTGGGTGAATTCTACGAGACCTACGGCGTGGATGCTATCATGCT
GGTCGAATACGCAGGCCGTGAGAAATAAGCGATTTGGATTCCGCTTCCCC
CCGAACCAGCAAGCTCAAAAGTCGCCTGCTCTCCCAAATCGTCTCCCCGG
GCGCTTCAACTTACCTGGCTCAACCCCATGGGGAACAAGGCCAAGGCGGG
CTGCCCCGTCAAGAACGTGCAGGCGACCCTCGATGGCCTCACGTCCGCGG
GCCTCACTGTCGCTGTGATAGAGATGGAGGTCTCGTCTCGACCCGTCGCC
CGTCATTTGCTCTTTTGCTTCTTCCTTTCCGCTCTCCTTCTCCACGTACA
ACTGCCCACTGCGACCACCACGACAAATATCATGCTTTCATGTGCCGTGC
GTAAGCATGTCCCGCATATTTCTGGATTTCGCACTCGGTTATGCTTTGCG
CCGTGGCGACTCCGAGAGACCGCAACTTCCACCTCCCACCGTCGTCCGTC
CTCCTCCCTGGACCGAGTAGCGCCATCCCACGTTCTAAGAGTATCAAGCA
GGAGCAGCAGTAGTAGTAATAGTAATGAGCAGGCTAGGAAAGGGCCGGGG
AGATCGAAAGCCACATCGAAATCTCCGCCTCGAGGCGCGAAACGTGGTGG
GAAAAGTAGCCGCTCCTTGTCCAGTGCATCTTCCTCCATGGCGTCCCCGG
AAAACGAGAGGGCCGTGGCCGACATCATCGGGAAAAGGACGGAGGCCGGG
AAGAAGGCGGGCGGCCTGGAGGGGTCGCTGGTCCGGGAGAGGGATATGTT
GATCTCAGAGGACGCGGGTAGAATGGCGCCCCGGGAGGAGGAAAAGGCCG
AGAACGATGACGCAAGCGACGGCGGGAAGAGCCAGCATGGCAGCAATCAA
TCACTACCTCTCCTTCTTTTACCATCTTCTCCCCCCTCGCCTTTCACCAG
TCCCTCCCCTCCTCCCTCCTCCCCTTTCGATCTGCCCGACGACCACCTCG
CTGGTCACCTTCAACGCCTCTACGCCGGCAGCCAACCGCCTTCCCCTTCC
TCCTCTCTGGGCCCTGATACCTTGCATCCCTACTGGTTGAAGCGCTTGTC
GATGCTTCAACGTCCGGCGGCGCGGGCGCTGGTGTCGCAGATCCTCCCCA
CGAACCCTTTGGGCTTCGATGCCGGCCCCACTCTGTCCCAGCGGCGCGGC
ACTCTCTACGACTTTGTGCTCACGCAAAAAAAAGCCCACCCTGAAAAAGT
GATCTTGACCCGGGTGGGTGAATTCTACGAGACCTACGGCGTGGATGCTA
TCATGCTGGTCGAATACGCAGGCCGTGAGAAATAAGCGATTTGGATTCCG
CTTCCCCCCGAACCAGCAAGCTCAAAAGTCGCCTGCTCTCCCAAATCGTC
TCCCCGGGCGCTTCAACTTACCTGGCTCAACCCCATGGGGAACAAGGCCA
AGGCGGGCTGCCCCGTCAAGAACGTGCAGGCGACCCTCGATGGCCTCACG
TCCGCGGGCCTCACTGTCGCTGTGATAGAGATGGAGGTCTCGTCTCGACC
CGTCGCCCGTCATTTGCTCTTTTGCTTCTTCCTTTCCGCTCTCCTTCTCC
ACGTACAACTGCCCACTGCGACCACCACGACAAATATCATGCTTTCATGT
GCCGTGCGTAAGCATGTCCCGCATATTTCTGGATTTCGCACTCGGTTATG
CTTTGCGCCGTGGCGACTCCGAGAGACCGCAACTTCCACCTCCCACCGTC
GTCCGTCCTCCTCCCTGGACCGAGTAGCGCCATCCCACGTTCTAAGAGTA
TCAAGCAGGAGCAGCAGTAGTAGTAATAGTAATGAGCAGGCTAGGAAAGG
GCCGGGGAGATCGAAAGCCACATCGAAATCTCCGCCTCGAGGCGCGAAAC
GTGGTGGGAAAAGTAGCCGCTCCTTGTCCAGTGCATCTTCCTCCATGGCG
TCCCCGGAAAACGAGAGGGCCGTGGCCGACATCATCGGGAAAAGGACGGA
GGCCGGGAAGAAGGCGGGCGGCCTGGAGGGGTCGCTGGTCCGGGAGAGGG
ATATGTTGATCTCAGAGGACGCGGGTAGAATGGCGCCCCGGGAGGAGGAA
AAGGCCGAGAACGATGACGCAAGCGACGGCGGGAAGAGCCAGCATGGCAG
CAATCAATCACTACCTCTCCTTCTTTTACCATCTTCTCCCCCCTCGCCTT
TCACCAGTCCCTCCCCTCCTCCCTCCTCCCCTTTCGATCTGCCCGACGAC
CACCTCGCTGGTCACCTTCAACGCCTCTACGCCGGCAGCCAACCGCCTTC
CCCTTCCTCCTCTCTGGGCCCTGATACCTTGCATCCCTACTGGTTGAAGC
GCTTGTCGATGCTTCAACGTCCGGCGGCGCGGGCGCTGGTGTCGCAGATC
CTCCCCACGAACCCTTTGGGCTTCGATGCCGGCCCCACTCTGTCCCAGCG
GCGCGGCACTCTCTACGACTTTGTGCTCACGCAAAAAAAAGCCCACCCTG
AAAAAGTGATCTTGACCCGGGTGGGTGAATTCTACGAGACCTACGGCGTG
GATGCTATCATGCTGGTCGAATACGCAG back to top
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