rna6295, rna6295 (mRNA) Nannochloropsis gaditana

Overview
Namerna6295
Unique Namerna6295
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2082
Alignment locationCM002468.1:195353..196383 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100283g3.8478.mrna
Orig protein idgnl|cribi|Naga_100283g3.8478
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:195353..196383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100283g3gene6088Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6295rna6295-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24396.1cds6280Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6295 ID=rna6295|Name=rna6295|organism=Nannochloropsis gaditana|type=mRNA|length=2082bp
ATGGGCGGAGAGAAATTAAATCATACTAATCCGTTCAGAGTAGAGCCACT
GCCTCAAGAATCAGCGGACGAAGGGGTGGCTTCCATAATCGCTACAACAA
CACGCAAGTGCCCCAGCCGTTGTGAGAAACGCGAAGCCTTCCTCCGTCAG
GCACTGGCGGATAAACAAGCCACACTTGTACGCCTTCATGAATATGAAAT
AGTGGTAAAAGAGCTCGCAGAGGCGATCGACAAGATCACAGAAGAAAAAG
AAGAAATACAAGATAAGCTACATGCGGTTCATCATCAGAATAGGCAGGGG
AATGAATTGCACTTGCTCCTTGACGCCATGATGACTCTCGGTACTTCCCG
GCGACATTCCTCCTTCGGAAGCTTCTCCGATGCCCCAGAGGGACGAGTCG
ACGCAACGTCTTCAAGAGGAGAGGCAATGACAGCGCGAGACGATCTGATG
GGCATCTGGGCCCGAGGGGAGACCAAAGAGCATCAAGAGGTGGAACGAGA
GCTCAACGTCTTGCGAAGGCGCATGGCCAAACTCTGTCGACGTATCCGAA
CACGGCAGGTGGAGAGCGAACGAGGAGCTCTACACCGCGTCCATGGATCT
GACAATAATGAGAGCCAGGGCGCAGCTACCAGTGCTTCCAAAGGAACATC
CCAAGATGGCGAGCACGTCGGGATGCGGCACGAAGAACGACGGGAGGAGG
TCTGGCACCCACGGTCACAGCTCCCGGGGCAGGAGCAAGACCAAAGGCAT
CATGAAAAACCGCACGTCCTCCAAAACGAGATCCGGGACTTGAAAGATAA
TCTACAGGTTGCACAGGCGCGATGCGCGAGCCTGGAGTCGGCAGTTTTCG
CGGAACATGGACAGTTGGAAGAAAGTCGCGGCGACCTCCGCGAAGCGATG
GAACGCGTCACGGAATTAGAAAAGCAGATTCAGCGGGCTCAGGAGTCCGA
GAAAGCGATCAAGGAGGAGACACGAGAAGAGATGGAAGCTTTGGAGTTCA
CAAATCACGACTTATCCCGGGAGGTGATGACTTTGGAGGCGTCGCTCGAA
GAAGCGCAGCAGGCGGCTGAGTCGGCGAGAAGCGAGCTTTTTCAACTTCA
AGTGGGAAGGGAAGAGGCAGAGCTAAGGACAGAGGCCGAAAAAGAGAAGG
TGGAGGAGCTTTCTGTGATCAAGCTTGCCTTAGCGGGCCAGGTCCGTCGT
TTGGAAGAAGAGCAGAGGCAGTGCACGGCCCGCCTCTCCTTGATGGAGGA
GGAGGTTCAGGTTTGGCGGCAGCGCGCGGAGGACGTGTCTGAGTGGGTCG
GCGTCATGTGCAATGAAACGGAGAAGAAAGAGGCAGGCACGGAGGAGGTT
CCCATCCCAGGGATCTTGGCAGCCGAGGGGAGGGTACAAACGGAGGAATA
TCAGACGGCAGAGAACGTGCTCAACGTCACGCGGGCCTCAACCGCCGAAG
CGAGCACAGCGACCGCGGCCACGATGACGACCCCCCAAGCTGACAGCCTG
CCTCTTCCCTCGATAAAGAAGACTGGAAATGCTGGTTCGAATCGTGTGGA
GGCCCTGCTGCAGGAAAATTTGGCCCTCCGTAAAACGATCGAAGGGTTGC
GAGGAGAGGACACCAAGGCGAAGCTTTCCTGAAGACGAAATCGAAGATGG
CACAACGTGTGGTGGAGGCGAAAGGGAAAGGTTAGGGAGGTATAATGCTT
GATGTCAGGAATAGCAAGTGAGAATGCTGGTGGGAATGGAGGAGGAGGAA
GCATTGTTTGGTAAGAAAATGGAAAAGCCTGAAGTGAAAAACGAGCCCAG
TGGGGGGAAAGGAGTGATAATGACAGGAAAGATAACGCAGTAGAAAGAAA
CAAAGTGATAAATTAATTGGACGGAAGTAAGAGAGCATGATCAGGGCAGA
TAGGGCGCAGGAAAGGGTAGGAGGCATTGAAGCAGGGCGGGTAAGAAGAC
TGGCAATAGGCATGGAACGTGTAAAGGGAGGGGCAGGGGCCCTGAGCTTT
GTATGAGAAGGCTGGGAGAAGAAAGAGAGCATGGATACGGCTCAGTCAAG
CCAGGCTTCAGAAACTAAGAAGACTCCGCACA
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protein sequence of rna6295

>rna6295-protein ID=rna6295-protein|Name=rna6295|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MSEDNPATRSPPASTTATNWFGSFSADIGRAFETARDQVVKAADEASPAF
TSAMDAVKLRAVKLKEEAVQAAQALHQVAEKAAQEISAEEARIKASSSAA
VPPSSLVSLLPWEANDESQEILTQPLMEQILAISHDEATFAPLHAEEEEQ
FGPFDLENYVTVITRLLSLDPALEKMHARLGGRGREEKEFWQSYFYRCAC
LRSGCGMGGNAPGGGGGGMRSGGSR
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mRNA from alignment at CM002468.1:195353..196383-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6295 ID=rna6295|Name=rna6295|organism=Nannochloropsis gaditana|type=mRNA|length=1031bp|location=Sequence derived from alignment at CM002468.1:195353..196383- (Nannochloropsis gaditana)
ATGTCTGAAGACAACCCTGCCACGCGCTCTCCACCCGCTTCAACCACCGC
GACCAATTGGTTCGGAAGTTTTAGTGCAGACATTGGCAGAGCCTTTGAGA
CAGCCCGGGATCAAGTCGTGAAGGCAGCAGATGTACGTGCTTGAGGACTA
GAGAGGGAGGAGCGAGGGAAGACGGGACAGGAGAGTCTTGGGAAATGTCT
CTTTATCTGCGAAAGGCAAGAAAGCGATTACCTCTTATCTTTTCTCGCAC
ATAACCAGGAAGCCTCTCCTGCATTTACCTCCGCCATGGACGCTGTGAAA
CTGCGTGCTGTAAAATTAAAAGAGGTACTGCTCCTCTCTCTCCTCTCCTG
CATGAGGCAGGAATCTACTTCTTCCATCGCATGCACGTATCACATTAAAA
TATACTGATTTTGTCAAGCTAGTTCCAAGTCCCAGCATTAGTTATTTCAA
TTCCAATGATAATTAGATCATTTGGTAGGCAACGCTTTTCACCTCCAGTC
GTCATTTCCTCTCTCTCTTCCGATTTTCCTCCCCGATATCCTTCCACCTA
GGAGGCTGTTCAAGCTGCTCAGGCCCTCCATCAGGTTGCTGAGAAAGCTG
CACAGGAAATCAGCGCCGAAGAAGCTCGAATCAAGGCATCTTCGTCCGCA
GCCGTTCCCCCATCTTCGCTTGTAAGCTTGCTGCCTTGGGAGGCGAATGA
TGAAAGTCAAGAAATCTTGACCCAGCCGTTGATGGAGCAAATTCTGGCCA
TTTCTCACGACGAGGCAACCTTTGCGCCCCTGCATGCGGAAGAAGAGGAG
CAGTTTGGCCCGTTTGACCTGGAAAATTACGTCACGGTCATTACCCGGCT
CCTGAGCTTGGACCCTGCCTTGGAGAAAATGCACGCCCGACTGGGCGGAC
GCGGGAGGGAGGAGAAAGAATTTTGGCAGTCGTATTTTTACCGGTGTGCC
TGTTTGCGTTCGGGGTGTGGGATGGGAGGGAATGCCCCGGGCGGGGGGGG
AGGGGGTATGAGATCAGGGGGGAGCCGGTGA
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Coding sequence (CDS) from alignment at CM002468.1:195353..196383-

>rna6295 ID=rna6295|Name=rna6295|organism=Nannochloropsis gaditana|type=CDS|length=2034bp|location=Sequence derived from alignment at CM002468.1:195353..196383- (Nannochloropsis gaditana)
GAGGCTGTTCAAGCTGCTCAGGCCCTCCATCAGGTTGCTGAGAAAGCTGC
ACAGGAAATCAGCGCCGAAGAAGCTCGAATCAAGGCATCTTCGTCCGCAG
CCGTTCCCCCATCTTCGCTTGTAAGCTTGCTGCCTTGGGAGGCGAATGAT
GAAAGTCAAGAAATCTTGACCCAGCCGTTGATGGAGCAAATTCTGGCCAT
TTCTCACGACGAGGCAACCTTTGCGCCCCTGCATGCGGAAGAAGAGGAGC
AGTTTGGCCCGTTTGACCTGGAAAATTACGTCACGGTCATTACCCGGCTC
CTGAGCTTGGACCCTGCCTTGGAGAAAATGCACGCCCGACTGGGCGGACG
CGGGAGGGAGGAGAAAGAATTTTGGCAGTCGTATTTTTACCGGTGTGCCT
GTTTGCGTTCGGGGTGTGGGATGGGAGGGAATGCCCCGGGCGGGGGGGGA
GGGGGTATGAGATCAGGGGGGAGCCGGTGAGAAGCCTCTCCTGCATTTAC
CTCCGCCATGGACGCTGTGAAACTGCGTGCTGTAAAATTAAAAGAGATGT
CTGAAGACAACCCTGCCACGCGCTCTCCACCCGCTTCAACCACCGCGACC
AATTGGTTCGGAAGTTTTAGTGCAGACATTGGCAGAGCCTTTGAGACAGC
CCGGGATCAAGTCGTGAAGGCAGCAGATGAGGCTGTTCAAGCTGCTCAGG
CCCTCCATCAGGTTGCTGAGAAAGCTGCACAGGAAATCAGCGCCGAAGAA
GCTCGAATCAAGGCATCTTCGTCCGCAGCCGTTCCCCCATCTTCGCTTGT
AAGCTTGCTGCCTTGGGAGGCGAATGATGAAAGTCAAGAAATCTTGACCC
AGCCGTTGATGGAGCAAATTCTGGCCATTTCTCACGACGAGGCAACCTTT
GCGCCCCTGCATGCGGAAGAAGAGGAGCAGTTTGGCCCGTTTGACCTGGA
AAATTACGTCACGGTCATTACCCGGCTCCTGAGCTTGGACCCTGCCTTGG
AGAAAATGCACGCCCGACTGGGCGGACGCGGGAGGGAGGAGAAAGAATTT
TGGCAGTCGTATTTTTACCGGTGTGCCTGTTTGCGTTCGGGGTGTGGGAT
GGGAGGGAATGCCCCGGGCGGGGGGGGAGGGGGTATGAGATCAGGGGGGA
GCCGGTGAGAAGCCTCTCCTGCATTTACCTCCGCCATGGACGCTGTGAAA
CTGCGTGCTGTAAAATTAAAAGAGATGTCTGAAGACAACCCTGCCACGCG
CTCTCCACCCGCTTCAACCACCGCGACCAATTGGTTCGGAAGTTTTAGTG
CAGACATTGGCAGAGCCTTTGAGACAGCCCGGGATCAAGTCGTGAAGGCA
GCAGATGAGGCTGTTCAAGCTGCTCAGGCCCTCCATCAGGTTGCTGAGAA
AGCTGCACAGGAAATCAGCGCCGAAGAAGCTCGAATCAAGGCATCTTCGT
CCGCAGCCGTTCCCCCATCTTCGCTTGTAAGCTTGCTGCCTTGGGAGGCG
AATGATGAAAGTCAAGAAATCTTGACCCAGCCGTTGATGGAGCAAATTCT
GGCCATTTCTCACGACGAGGCAACCTTTGCGCCCCTGCATGCGGAAGAAG
AGGAGCAGTTTGGCCCGTTTGACCTGGAAAATTACGTCACGGTCATTACC
CGGCTCCTGAGCTTGGACCCTGCCTTGGAGAAAATGCACGCCCGACTGGG
CGGACGCGGGAGGGAGGAGAAAGAATTTTGGCAGTCGTATTTTTACCGGT
GTGCCTGTTTGCGTTCGGGGTGTGGGATGGGAGGGAATGCCCCGGGCGGG
GGGGGAGGGGGTATGAGATCAGGGGGGAGCCGGTGAGAAGCCTCTCCTGC
ATTTACCTCCGCCATGGACGCTGTGAAACTGCGTGCTGTAAAATTAAAAG
AGATGTCTGAAGACAACCCTGCCACGCGCTCTCCACCCGCTTCAACCACC
GCGACCAATTGGTTCGGAAGTTTTAGTGCAGACATTGGCAGAGCCTTTGA
GACAGCCCGGGATCAAGTCGTGAAGGCAGCAGAT
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Synonyms
Publications