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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100283g4.8476.mrna |
| Orig protein id | gnl|cribi|Naga_100283g4.8476 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:192466..194824 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6294 ID=rna6294|Name=rna6294|organism=Nannochloropsis gaditana|type=mRNA|length=3995bp
GATACACCTCAATGCATCTATTAACAGCTCAAAGCTAGAAAGACCAAAAG
CTTGTATGAGTCACATAATGTCTCCACACATGCACGTAGCCTTGCCCAGA
AATTCTTTTTTAAGTTCAAGCCTTTCGAAAAAACCTCCCAGCTTTTTTAT
TTCATTTTTTCCCCGCCCCGCTCGCTTTCAGGGCTTGGCATGTTCTTGTT
TCTTATATGCGTGTTTACGCGACCCCCATTCGGCACATTCTTCTGTTCCC
TTTGCGTCCATGTTATCCACCATGCATGTGCCTCTGCTGGCATGGACATA
CGTTTTCGACGTTTCTGGGAGTCGGTGGTGATCCATTTCCCTTTTTTCGT
CTGCTCTGACATCAGCGTGTACGTACAGCGAGCAGAAGAAAGGAGCTTTC
TTGGCAGCTGGTGCAGTCAGCAAAATTTCCAGGCGTTGATCACTTGCAAG
GAAAGACACCCACGCACTGACCCTTCCCGGCACGGTGATTGGGACACGCG
AGACGAACCTAGAGGAGACAGTCCGCGCCACCTTCCCTCTCCTGCTCCCC
CGCCTTTGTACAAACAGCACTGCGGGGTTGAGAGGAAATTTGGAAGGGAA
GAGTAGTGCAGACGTCTCTAGTAGCGTGACTGGCTGTGCCGACGAGTTGC
AGCAGCCACAGCCCTTGCCGAGCACCCCAAAGGGTCCGAGGCAATCCCCA
GAGACAACAAGCCACGAGAACCGTCCTTTGCCGCTGCGCACGGCGCGAGG
GACGTTTTGCAGCCGCGCCGTTTACGAGGAAACGGACGTCGGTACCAATT
TATTGAAGAGCACGGGCAAGCATAGCAGCCAACGGCGTCGAGTCGGCACC
ATGGTCTCTGCAACGCGGCGCCATCGGCGGTACGGAGGTTACGGCGGAGG
CAGTGGGGGGCGGGGGAAGGGCACAGGGCGGGGGGGTGCCCACGCTGTGG
GCCAGCAGGGCGTGGACGAGACGCTTTTGCGCAAGTACCACCAGGCGGCG
GACCTGATCGCGCCGGTGGAACGGGACGAGGAGAAGCGGAACGTGCACCG
GGTGCGGGAGTACTGGCTCGAGCACGAGGCGATCAAGCACTTGGCCACCC
TGCAAGCCCTGCAGATTCCCGTGGCCACGTTTGAATCCCACTTCTTGCAG
GCGAACGCCCACAACCCCAAGTATGTCCGAGGGACGTTACGGGAAACGGT
TCGCACCTTCTTCCGAGAATTCACCGACGAGGCCGGCGTCCGGGTCTTGA
CGCTGAAATTGTCGGAAAGGATGGTGTACTCGAAACCCAGCAAGAATATT
TTGAAACGCTGGAATCTGAGCAACGGCATGCTGTACTTCTTCTACGCGGC
GGTGGGTCGGTCGGCACCGCCGACAGGGGACGAAATCCTGGAGCCTTTTT
ATTTCCAAAAGCGCGTGGACTTTATCCGCAAAGTGTGCGGTGGTGGGGAA
GGCGCGGGGAGTGACGTGGGACTGGCGTTGTCCCTTCCCCCGGCCCTACG
GCCTGCGGGCGAACGAGGGCAGGGCGAGGCGGTGGGCGGGGGAGAGGGGC
TGACAGAGGCAGGGGTAGGAACGGCAGCCACCGCCGCGGGAGGGTTGGGA
GGCAGGGGAGAACGGCACCGCGCGGGTTCACACGACTTTTTCTACCAGCA
AGAGCAACTGCAGCAAGCGGGCAGATCCAGGAAACGCCGCCGGGAAGGGG
GAGGGGCGCCTCTACCCCTGTCGGAGCTCTATGTCCCCGCCGACCCGGTC
AGTGCCTCCGTGGAGAAGGCGGGCGTGAAGGAGGAAGCCCCGGTTGAAGT
GGAGGATGGAGACGAGGAGGCAGTGCACCTGTTGCTAAGCTTTTTGAAAG
AGCGAGTTTGGGCGGGCGTGGAGGAGAAAGCCGTGCGGGACGCCGTATCG
GCGGGGGTGTGGCGCTTGGTGGCCGAAGAAAGCCTGGAGGCGGATCCCTC
CCTTGCTTACCTGGCACGACCCGCCCGGACGTTTTGGGTCCCCTCCTTGG
CACCCCCGGCATGGGAGGAAGGGAAGGAGGGCGGGGTGGAGGGCGGGGTG
GAGGGTTGGGGGTGGGAGAATGGATGCCTTCCAGTCTTTGTCCGGGCTTG
TCGCCGGAATTGGGCGAAGGTGGAAGGGGTGTGGGAGGCGTGGAACGAGG
ACCTGGGGAACAATGCCTTGGAGTGGAAGGAGCTGTGGCGGGACGTGGGG
GCGGAGGAAGGGGAGGAGGGCGGGGTGGAGGAAGACCTGGGCATGGATCT
GGGCTTGGAATTGAAGGCCCCGGTGGCGGGGGAGAGCGGGCGGAAAGAGG
AAGAGGACAGTTTCCTCCTCTTCCCCTGCAGCTTGGAGGGGGCACAGGCA
GAGACGGAGAACGTGTCGATGCCGTCCATGGGGGTGATGAGGGACGGGAG
GGAGGACGTGACGGAGGGCGTGACGGAGGGCGGGCTCCCGGAGCACCGGG
GCGCACCAGTCGTGTTCGCGCCCGTGCCCGATCCGAACGGTGATTTCCCC
CCCTTGGGCTATGGACAGACGCGTCCTTTCCCCTCCCTCGTTCCCTCCAC
GGACCCGTCCTCTCTCTCCTTCTCCTCGACGCCCACCCGGTCCGTGACCG
TGGCGCCCCCTCCGGGAGACGTCTTCTTCTCCGTGTCGGTGGAAGGGGAG
GACGGGAAGGAGGACGGGAGGGAGGACAGGAGGGAGGACGGGAGGGAAGG
GGCGGTGTTCCAGGAAGGGGCGTTGAAGCCCTGGGTGAAACAAGAGGAAA
TGCGAGAAGAGAGGGAGGAGGAGGCGACTGAGGTGGTTTCCGCTGGGACC
AGCGCGGCTGCTACGGTGGAGGGGGGTGAGGGAGGGACGGAGGAGGTGTG
GGAAGACGGGGAGGAAGGCAGAATGATGATGGATTTGGGCCTCAACATGG
GTGACGCTACCCTGCAGGCCTTCATGGCGGGGGTTGGGGGGGGAATGGAG
GGAGGAAAAGAGGGAGGGAAAGGGGGGGTGGGAGGACGGGAGGGCATGAC
GGGCGAGGTAAACACGAGTGGGCGAGGTATGGGAGAAGGCGGATGCGGCT
TGGTGGATGAAAGCTTTTATTTCGCATACCCTGGACCGCAATCAGAGGTC
GGTAGTAACGGCGAAGTGCCGCCGTTGCCGGTCTCGGAGAATCTGTTTTG
AGACACGGAAGGCGAACAAGGACAGGCACGGTGGAGTAGGCGAGGGAAAG
GAAGAAGACAAGGGGGTTCGAGGGGAGGGAGGTGTCTTGTGGAGGTGGAG
GGAAGGGCTGAAGGGGCGGAAGACGGCTCAGGGCCGAGGGGGGGGGGCGG
TCGCGGGAGAAGAGGGGCGGAGGCTGGAACGGGAGGAATTTCGATGGAGT
ATCCTCATAGAGGAAAGGTTGTGAGATTAAGACAATGAAGCTGGCTTAGA
CACGCAAAAGAGAGGAGAAACGGGAGTCTTGGGGGCGATGAACTTGCGCC
TAAGAGGACCCCTGGGCCCATGGAAACACACAATTTCACGGTACATACAT
GCACAAAAAGAGAAATAGAGACAAGTGGTAGCATTGATTGAAAAGAGAAA
GGGCGGGTGAGCAAGGATCGTCCGTGTAGAAAATCGAAGAGGAGCGTTGA
GAAGCGCCCGAATGAAGACCGCAGGGACACGAAGGGTGAGCAGCTGTACA
AAAGCAGAGACAGAGAAGAAGGCCTTGGAGGGGATGAAATGATATAAAGC
GTATAAATGTAGGAATGAGAGAGGGAAAGATAAGACTGCTTTCTTTGGTT
TTTGCAATGTCTTATCCCGCGAGATTGAAAGAGGCAGTTTGACGGGCGGA
AGAAGTGAATTTTCACATATTGCGGGGGAAAAACACCCTCCAAACTTCTA
AACCTTGATGCGTTTACATAATTGAAGGGAAGCAAGAATTGTTTCAACAT
GTGAAAAAAGAGAGAGGACGCGACCGAAAGGTTGTCACGCGCGCTTTTGG
AAAGGAAAAGTGAGGACTTTCTCCACAGTTCTGGCACCGCTTGTT back to topprotein sequence of rna6294 >rna6294-protein ID=rna6294-protein|Name=rna6294|organism=Nannochloropsis gaditana|type=polypeptide|length=543bp
MGGEKLNHTNPFRVEPLPQESADEGVASIIATTTRKCPSRCEKREAFLRQ
ALADKQATLVRLHEYEIVVKELAEAIDKITEEKEEIQDKLHAVHHQNRQG
NELHLLLDAMMTLGTSRRHSSFGSFSDAPEGRVDATSSRGEAMTARDDLM
GIWARGETKEHQEVERELNVLRRRMAKLCRRIRTRQVESERGALHRVHGS
DNNESQGAATSASKGTSQDGEHVGMRHEERREEVWHPRSQLPGQEQDQRH
HEKPHVLQNEIRDLKDNLQVAQARCASLESAVFAEHGQLEESRGDLREAM
ERVTELEKQIQRAQESEKAIKEETREEMEALEFTNHDLSREVMTLEASLE
EAQQAAESARSELFQLQVGREEAELRTEAEKEKVEELSVIKLALAGQVRR
LEEEQRQCTARLSLMEEEVQVWRQRAEDVSEWVGVMCNETEKKEAGTEEV
PIPGILAAEGRVQTEEYQTAENVLNVTRASTAEASTATAATMTTPQADSL
PLPSIKKTGNAGSNRVEALLQENLALRKTIEGLRGEDTKAKLS back to topmRNA from alignment at CM002468.1:192466..194824+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6294 ID=rna6294|Name=rna6294|organism=Nannochloropsis gaditana|type=mRNA|length=2359bp|location=Sequence derived from alignment at CM002468.1:192466..194824+ (Nannochloropsis gaditana)
ATGGGCGGAGAGAAATTAAATCATACTAATCCGTTCAGAGTAGAGCCACT
GCCTCAAGAATCAGCGGACGAAGGGGTGGCTTCCATAATCGCTACAACAA
CACGCAAGTGCCCCAGCCGTTGTGAGAAACGcgaagccttcctccgtcag
gcACTGGCGGATAAACAAGCCACACTTGTACGCCTTCATGAATATGAAAT
AGTGGTAAAAGAGCTCGCAGAGGCGATCGACAAGATcacagaagaaaaag
gtGCGACATATTCACACAACTTGTCCCATACTTTTTTTGTAGCGACGATA
CAATTAATGGAGCATAAACTCGCCATGTAGGGCTTGCAGCAATACCCACA
AAGCGCACTTGTGCTGCGGCATGTTCCCTCGATACACAATCTATGCACGC
ATGGGTACATACACGAAGACGAGTGCCATGCgatttccttttttccttac
TTCCCCGTATTTGTCCGCTATGGTAGTGCTTTGTCTGCAAACAACTCATA
AAGCCCCTATCGATGCTCTTTTCACAGAAGAAATACAAGATAAGCTACAT
GCGGTTCATCATCAGAATAGGCAGGGGAATGAATTGCACTTGCTCCTTGA
CGCCATGATGACTCTCGGTACTTCCCGGCGACATTCCTCCTTCGGAAGCT
TCTCCGATGCCCCAGAGGGACGAGTCGACGCAACGTCTTCAAGAGGAGAG
GCAATGACAGCGCGAGACGATCTGATGGGCATCTGGGCCCGAGGGGAGAC
CAAAGAGCATCAAGAGGTGGAACGAGAGCTCAACGTCTTGCGAAGGCGCA
TGGCCAAACTCTGTCGACGTATCCGAACACGGCAGGTGGAGAGCGAACGA
GGAGCTCTACACCGCGTCCATGGATCTGACAATAATGAGAGCCAGGGCGC
AGCTACCAGTGCTTCCAAAGGAACATCCCAAGATGGCGAGCACGTCGGGA
TGCGGCACGAAGAACGACGGGAGGAGGTCTGGCACCCACGGTCACAGCTC
CCGGGGCAGGAGCAAGACCAAAGGCATCATGAAAAACCGCACGTCCTCCA
AAACGAGATCCGGGACTTGAAAGATAATCTACAGGTTGCACAGGCGCGAT
GCGCGAGCCTGGAGTCGGCAGTTTTCGCGGAACATGGACAGTTGGAAGAA
AGTCGCGGCGACCTCCGCGAAGCGATGGAACGCGTCACGGAATTAGAAAA
GCAGATTCAGCGGGCTCAGGAGTCCGAGAAAGCGATCAAGGAGGAGACAc
gagaagagatggaagcTTTGGAGTTCACAAATCACGACTTATCCCGGGAG
GTGATGACTTTGGAGGCGTCGCTCGAAGAAGCGCAGCAGGCGGCTGAGTC
GGCGAGAAGCGAGCTTTTTCAACTTCaagtgggaagggaagaggcagagc
tAAGGACAGAGGCcgaaaaagagaaggtggaggagctttCTGTGATCAAG
CTTGCCTTAGCGGGCCAGGTCCGTCgtttggaagaagagcagagGCAGTG
CACggcccgcctctccttgatggaggaggaggttcaggTTTGGCGGCAGC
GCGCGGAGGACGTGTCTGAGTGGGTCGGCGTCATGTGCAATGaaacggag
aagaaagaggcaggcACGGAGGAGGTTCCCATCCCAGGGATCTTGGCAGC
CGAGGGGAGGGTACAAACGGAGGAATATCAGACGGCAGAGAACGTGCTCA
ACGTCACGCGGGCCTCAACCGCCGAAGCGAGCACAGCGACCGCGGCCACG
ATGACGACCCCCCAAGCTGACagcctgcctcttccctcgaTAAAGAAGAC
TGGAAATGCTGGTTCGAATCGTGTGGAGGCCCTGCTGCAGGAAAATTTGG
CCCTCCGTAAAACGATCGAAGGGTTGCGAGGAGAGGACACCAAGGCGAAG
CTTTCCTGAAGACGAAATCGAAGATGGCACAAcgtgtggtggaggcgaaa
gggaaaggTTAGGGAGGTATAATGCTTGATGTCAGGAATAGCAAGTGAGA
ATGCTggtgggaatggaggaggaggaagcattgTTTGGtaagaaaatgga
aaagccTGAAGTGAAAAACGAGCCCagtggggggaaaggagtgaTAATGA
CAGGAAAGATAACGCAGTAGAAAGAAACAAAGTGATAAATTAATTGGACG
GAAGTAAGAGAGCATGATCAGGGCAGATAGGGCGCAGGAAAGGGTAGGAG
GCATTGAAGCAGGGCGGGTAAGAAGACTGGCAATAGGCATGGAACGtgta
aagggaggggcaggggccctGAGCTTTGTATGAGAAGgctgggagaagaa
agagagcatGGATACGGCTCAGTCAAGCCAGGCTTCAGAAACTAAGAAGA
CTCcgcaca back to topCoding sequence (CDS) from alignment at CM002468.1:192466..194824+ >rna6294 ID=rna6294|Name=rna6294|organism=Nannochloropsis gaditana|type=CDS|length=3264bp|location=Sequence derived from alignment at CM002468.1:192466..194824+ (Nannochloropsis gaditana)
ATGGGCGGAGAGAAATTAAATCATACTAATCCGTTCAGAGTAGAGCCACT
GCCTCAAGAATCAGCGGACGAAGGGGTGGCTTCCATAATCGCTACAACAA
CACGCAAGTGCCCCAGCCGTTGTGAGAAACGcgaagccttcctccgtcag
gcACTGGCGGATAAACAAGCCACACTTGTACGCCTTCATGAATATGAAAT
AGTGGTAAAAGAGCTCGCAGAGGCGATCGACAAGATcacagaagaaaaag
AAGAAATACAAGATAAGCTACATGCGGTTCATCATCAGAATAGGCAGGGG
AATGAATTGCACTTGCTCCTTGACGCCATGATGACTCTCGGTACTTCCCG
GCGACATTCCTCCTTCGGAAGCTTCTCCGATGCCCCAGAGGGACGAGTCG
ACGCAACGTCTTCAAGAGGAGAGGCAATGACAGCGCGAGACGATCTGATG
GGCATCTGGGCCCGAGGGGAGACCAAAGAGCATCAAGAGGTGGAACGAGA
GCTCAACGTCTTGCGAAGGCGCATGGCCAAACTCTGTCGACGTATCCGAA
CACGGCAGGTGGAGAGCGAACGAGGAGCTCTACACCGCGTCCATGGATCT
GACAATAATGAGAGCCAGGGCGCAGCTACCAGTGCTTCCAAAGGAACATC
CCAAGATGGCGAGCACGTCGGGATGCGGCACGAAGAACGACGGGAGGAGG
TCTGGCACCCACGGTCACAGCTCCCGGGGCAGGAGCAAGACCAAAGGCAT
CATGAAAAACCGCACGTCCTCCAAAACGAGATCCGGGACTTGAAAGATAA
TCTACAGGTTGCACAGGCGCGATGCGCGAGCCTGGAGTCGGCAGTTTTCG
CGGAACATGGACAGTTGGAAGAAAGTCGCGGCGACCTCCGCGAAGCGATG
GAACGCGTCACGGAATTAGAAAAGCAGATTCAGCGGGCTCAGGAGTCCGA
GAAAGCGATCAAGGAGGAGACAcgagaagagatggaagcTTTGGAGTTCA
CAAATCACGACTTATCCCGGGAGGTGATGACTTTGGAGGCGTCGCTCGAA
GAAGCGCAGCAGGCGGCTGAGTCGGCGAGAAGCGAGCTTTTTCAACTTCa
agtgggaagggaagaggcagagctAAGGACAGAGGCcgaaaaagagaagg
tggaggagctttCTGTGATCAAGCTTGCCTTAGCGGGCCAGGTCCGTCgt
ttggaagaagagcagagGCAGTGCACggcccgcctctccttgatggagga
ggaggttcaggTTTGGCGGCAGCGCGCGGAGGACGTGTCTGAGTGGGTCG
GCGTCATGTGCAATGaaacggagaagaaagaggcaggcACGGAGGAGGTT
CCCATCCCAGGGATCTTGGCAGCCGAGGGGAGGGTACAAACGGAGGAATA
TCAGACGGCAGAGAACGTGCTCAACGTCACGCGGGCCTCAACCGCCGAAG
CGAGCACAGCGACCGCGGCCACGATGACGACCCCCCAAGCTGACagcctg
cctcttccctcgaTAAAGAAGACTGGAAATGCTGGTTCGAATCGTGTGGA
GGCCCTGCTGCAGGAAAATTTGGCCCTCCGTAAAACGATCGAAGGGTTGC
GAGGAGAGGACACCAAGGCGAAGCTTTCCTGAATGGGCGGAGAGAAATTA
AATCATACTAATCCGTTCAGAGTAGAGCCACTGCCTCAAGAATCAGCGGA
CGAAGGGGTGGCTTCCATAATCGCTACAACAACACGCAAGTGCCCCAGCC
GTTGTGAGAAACGcgaagccttcctccgtcaggcACTGGCGGATAAACAA
GCCACACTTGTACGCCTTCATGAATATGAAATAGTGGTAAAAGAGCTCGC
AGAGGCGATCGACAAGATcacagaagaaaaagAAGAAATACAAGATAAGC
TACATGCGGTTCATCATCAGAATAGGCAGGGGAATGAATTGCACTTGCTC
CTTGACGCCATGATGACTCTCGGTACTTCCCGGCGACATTCCTCCTTCGG
AAGCTTCTCCGATGCCCCAGAGGGACGAGTCGACGCAACGTCTTCAAGAG
GAGAGGCAATGACAGCGCGAGACGATCTGATGGGCATCTGGGCCCGAGGG
GAGACCAAAGAGCATCAAGAGGTGGAACGAGAGCTCAACGTCTTGCGAAG
GCGCATGGCCAAACTCTGTCGACGTATCCGAACACGGCAGGTGGAGAGCG
AACGAGGAGCTCTACACCGCGTCCATGGATCTGACAATAATGAGAGCCAG
GGCGCAGCTACCAGTGCTTCCAAAGGAACATCCCAAGATGGCGAGCACGT
CGGGATGCGGCACGAAGAACGACGGGAGGAGGTCTGGCACCCACGGTCAC
AGCTCCCGGGGCAGGAGCAAGACCAAAGGCATCATGAAAAACCGCACGTC
CTCCAAAACGAGATCCGGGACTTGAAAGATAATCTACAGGTTGCACAGGC
GCGATGCGCGAGCCTGGAGTCGGCAGTTTTCGCGGAACATGGACAGTTGG
AAGAAAGTCGCGGCGACCTCCGCGAAGCGATGGAACGCGTCACGGAATTA
GAAAAGCAGATTCAGCGGGCTCAGGAGTCCGAGAAAGCGATCAAGGAGGA
GACAcgagaagagatggaagcTTTGGAGTTCACAAATCACGACTTATCCC
GGGAGGTGATGACTTTGGAGGCGTCGCTCGAAGAAGCGCAGCAGGCGGCT
GAGTCGGCGAGAAGCGAGCTTTTTCAACTTCaagtgggaagggaagaggc
agagctAAGGACAGAGGCcgaaaaagagaaggtggaggagctttCTGTGA
TCAAGCTTGCCTTAGCGGGCCAGGTCCGTCgtttggaagaagagcagagG
CAGTGCACggcccgcctctccttgatggaggaggaggttcaggTTTGGCG
GCAGCGCGCGGAGGACGTGTCTGAGTGGGTCGGCGTCATGTGCAATGaaa
cggagaagaaagaggcaggcACGGAGGAGGTTCCCATCCCAGGGATCTTG
GCAGCCGAGGGGAGGGTACAAACGGAGGAATATCAGACGGCAGAGAACGT
GCTCAACGTCACGCGGGCCTCAACCGCCGAAGCGAGCACAGCGACCGCGG
CCACGATGACGACCCCCCAAGCTGACagcctgcctcttccctcgaTAAAG
AAGACTGGAAATGCTGGTTCGAATCGTGTGGAGGCCCTGCTGCAGGAAAA
TTTGGCCCTCCGTAAAACGATCGAAGGGTTGCGAGGAGAGGACACCAAGG
CGAAGCTTTCCTGA back to top
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