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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100283g6.8475.mrna |
| Orig protein id | gnl|cribi|Naga_100283g6.8475 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:185811..186866 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6292 ID=rna6292|Name=rna6292|organism=Nannochloropsis gaditana|type=mRNA|length=1347bp
AGGAGGGAGGGAAGAAGAGCAACTTGAAATCTTCCCTTGTCGCCTGCTAC
CGGAGTGGCAAAAGCCATTTCCTCGACCGTATTCCTCCCCCTCCTCCTCC
TCTACCTCACTACCCTCCCTCCCTCCCTCCTCCCGCTCCTCTTCGCCTCC
CTCCTTCTTCCACCTGCCACCCTTCCCTTCCCCCCTGGAAGAGCATGCCT
CCCTCCTCCACCTCTTGCAGCAGCAGAGGAAACACCTTCGGCAGCAAAAA
GAGAGAGGAAGTCCCGGAGAGGAGGAGAAGTGCATCGCCCTCCTTATCGA
CGGAGGCTTCCTTTTCCTCCTTGACGCCGGACGGTGAGGCACTAAAGCCA
ATGGATTCGGTGCCCCTCCCCCCCTACAGCGCCGTATCATTACTACGTTT
AAATCCTCCCTTCCCTGTCCGTCTTATCGCTCCCTCTCACCCTCCTTTCC
TTTCCTTCTTTCTTCGAGGGAAAAAAGGCCGTCGTCCTCTTTCCTCCACA
CCGAGTGCTGCAAGTGCTGACAAACTGTCTCCCCACTGTCTTCCCGCCCC
CCCTCTCTCCCTTCCTCCCTCCCTCCCTAGTACCCGCTACCTGTCCGCCT
TGCCCTTGCAGCACGTGGATGTCGCTCTCGTCTCGCAACAGCCTCGTCAT
CTTACCGTCGTCACCTGGATCGACCCTGCCCTCCCTCCCTTCCTCCCTCC
TCCCAGCCTTGTTTCCTCCTCCGCCGCCGCCTCGACCATCCCATTGTGGC
GCCTTCGCCGCCTCCTCCCTCCCTCCACCCCTTCCTCCACCGGTTCCTCT
TCCACTTACCTCGCTTGCCCTTCCCCCCGAAGGATGAGCAGGGGGATGGA
TGAGGAAGGAGGGGAGGTTGTGCAACGCGTCCTCGACCTAGAATTTGAAA
ATATGTCCGATTGTCAGCGGGCAAAGCATCGAGTGGAAAGCGCGCGTCTT
CAGAGCAGGCGGGAAACCCGGGAGAAAGTACGCGTGTGGTTGGAGTGTTA
CGCAATGGTTGACAAAGAGGGAGGGGTGGGGAGGAGAGAGGGAACAAGGA
ATGGCAAGGGGGAGGGAGGGGCCTTGAGAGGCGGAATAAAATAAATCGGA
GCCATTTTGCTGCCATGTCTGGACAGTCCAGCCGTTCCTTGAAGGCTCGG
TGATCCTACATATATCATATTATCCCGCTCCTGAGAACAGTGTTGCCAGA
GCGCGATGGCCTCTTACTTGTGCCGATTTACAATTCTTTCTAAGCATCAC
ATTGTGCGTCATTTTTTGACATGAATCATGTACAGATGATACATCAGTCA
GGCTTGCGCTCTTAACTTCCCATGATGAAGAATCATTCTCTTTTTGT back to topprotein sequence of rna6292 >rna6292-protein ID=rna6292-protein|Name=rna6292|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MRRAGIGRRMGGGGGGGAGWGEEYTLSVEIFDRKGGFRLFCSYGRVSIMH
QGVGVEGRWMTKLAVTGFASCWHFSAASRDSVHGRFETIKDYFERAHEPG
LEHCLCTEVTAMHKKTGRMAVLYASSKESRRRLAGEKNGTSYFEEELRPA
FASSAGVMASTASGSSHPGLPPSLSSFCAPSPGIPYLAASGIAVSKVSTP
PSTSSLSPLPAGIPSMDEEKEQKYRVDRLYLIFSTERRWDLPKIFEGLEW
T back to topmRNA from alignment at CM002468.1:185811..186866+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6292 ID=rna6292|Name=rna6292|organism=Nannochloropsis gaditana|type=mRNA|length=1056bp|location=Sequence derived from alignment at CM002468.1:185811..186866+ (Nannochloropsis gaditana)
GTGGCCTTGGCTGAAATCGCTCAAGACGGGGCCCGTCGACTTGTTGCCCT
GCCTGGACGCGTACCAGGGTGGCCGAGAGGGgccggaaggggggagggtg
tggcGGGAGTTTTGTCTTCGCCACGGTCGTAGCATGCGCCGGGCCGGGAT
CGGGAGACGtatggggggagggggagggggaggggctggttGGGGGGAAG
AGTATACGCTGAGCGTGGAGATTTTCGACCGAAAAGGGGGGTTCCGTCTC
TTCTGCTCCTACGGACGCGTCAGCATCATGCACCAAGGAGtcggggtgga
agggcggtGGATGACAAAGCTCGCGGTCACTGGCTTTGCCTCCTGCTGGC
ATTTCTCGGCGGCTTCCCGGGATTCTGTCCACGGTGCGTTTTGACTTTTT
GAATTCAAATTTAAAAGAGCATGAAGGTCTTTCCTAAAGCTACTCTCGCG
ActcgctcctccctgagGCTCCTATCCCAAATTCTCATACtcgtcctctc
ttttccctcttctgccaccgttcctccctctctcccccccttgttcCCAG
GTCGCTTTGAGACCATCAAGGATTACTTCGAACGCGCCCACGAGCCAGGA
CTGGAGCATTGCTTGTGCACGGAAGTGACAGCCATGCATAAGAAAACTGG
GCGGATGGCGGTGCTGTACGCTTCCAGCAAAGAATCTCGCCGTCggctgg
cgggggaaaagaacGGCACGTCGTACTTTGAAGAGGAGCTTCGCCctgcc
tttgcctcctcggccgggGTCATGGCGTCTACCGCAAGCGGGTCCTCCCa
tcctggccttcctccttctctctcctccttctgcgccccctcgcccggTA
TTCCTTacttggccgcctccggcATTGCAGTCAGTAAGgtctccacccct
ccctccacctcctccctctctccactgCCCGCCGGTATCCCCtcgatgga
cgaggagaaggaacaaaAGTACCGGGTAGACCGGTTGTATCTGATATTTT
CCACGGAACGTCGATGGGATTTGCCCAAAATCTTTGAGGGATTGGAATGG
ACGTAA back to topCoding sequence (CDS) from alignment at CM002468.1:185811..186866+ >rna6292 ID=rna6292|Name=rna6292|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002468.1:185811..186866+ (Nannochloropsis gaditana)
ATGCGCCGGGCCGGGATCGGGAGACGtatggggggagggggagggggagg
ggctggttGGGGGGAAGAGTATACGCTGAGCGTGGAGATTTTCGACCGAA
AAGGGGGGTTCCGTCTCTTCTGCTCCTACGGACGCGTCAGCATCATGCAC
CAAGGAGtcggggtggaagggcggtGGATGACAAAGCTCGCGGTCACTGG
CTTTGCCTCCTGCTGGCATTTCTCGGCGGCTTCCCGGGATTCTGTCCACG
GTCGCTTTGAGACCATCAAGGATTACTTCGAACGCGCCCACGAGCCAGGA
CTGGAGCATTGCTTGTGCACGGAAGTGACAGCCATGCATAAGAAAACTGG
GCGGATGGCGGTGCTGTACGCTTCCAGCAAAGAATCTCGCCGTCggctgg
cgggggaaaagaacGGCACGTCGTACTTTGAAGAGGAGCTTCGCCctgcc
tttgcctcctcggccgggGTCATGGCGTCTACCGCAAGCGGGTCCTCCCa
tcctggccttcctccttctctctcctccttctgcgccccctcgcccggTA
TTCCTTacttggccgcctccggcATTGCAGTCAGTAAGgtctccacccct
ccctccacctcctccctctctccactgCCCGCCGGTATCCCCtcgatgga
cgaggagaaggaacaaaAGTACCGGGTAGACCGGTTGTATCTGATATTTT
CCACGGAACGTCGATGGGATTTGCCCAAAATCTTTGAGGGATTGGAATGG
ACGTAAATGCGCCGGGCCGGGATCGGGAGACGtatggggggagggggagg
gggaggggctggttGGGGGGAAGAGTATACGCTGAGCGTGGAGATTTTCG
ACCGAAAAGGGGGGTTCCGTCTCTTCTGCTCCTACGGACGCGTCAGCATC
ATGCACCAAGGAGtcggggtggaagggcggtGGATGACAAAGCTCGCGGT
CACTGGCTTTGCCTCCTGCTGGCATTTCTCGGCGGCTTCCCGGGATTCTG
TCCACGGTCGCTTTGAGACCATCAAGGATTACTTCGAACGCGCCCACGAG
CCAGGACTGGAGCATTGCTTGTGCACGGAAGTGACAGCCATGCATAAGAA
AACTGGGCGGATGGCGGTGCTGTACGCTTCCAGCAAAGAATCTCGCCGTC
ggctggcgggggaaaagaacGGCACGTCGTACTTTGAAGAGGAGCTTCGC
CctgcctttgcctcctcggccgggGTCATGGCGTCTACCGCAAGCGGGTC
CTCCCatcctggccttcctccttctctctcctccttctgcgccccctcgc
ccggTATTCCTTacttggccgcctccggcATTGCAGTCAGTAAGgtctcc
acccctccctccacctcctccctctctccactgCCCGCCGGTATCCCCtc
gatggacgaggagaaggaacaaaAGTACCGGGTAGACCGGTTGTATCTGA
TATTTTCCACGGAACGTCGATGGGATTTGCCCAAAATCTTTGAGGGATTG
GAATGGACGTAA back to top
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