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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100179g1.5424.mrna |
Orig protein id | gnl|cribi|Naga_100179g1.5424 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002456.1 | supercontig | CM002456.1:31364..32790 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna629 ID=rna629|Name=rna629|organism=Nannochloropsis gaditana|type=mRNA|length=1984bp TTTGGGAGTTTCCTTGATACTTGCGCCTGTTCACCCCAGCCGTTACCGGT AGCTTTAAAGCGTGCGCTGCGGAACGAGGAGAGGAAAAGAGTGGGAAAGA AACGACTGTCGAATCTCTCTACTGCAGCAGAGGATCGGCATGTCTGTGGA CACAATGAATCAATCATCTGTAGGCTCTTAGCAGTAGGAAAAGACAAGGT CAGACCATATAGCCGACGGAAATAGCTACGCGTGCATAGCGTTCGTTCTT AATCTTGGGAGTGGGTGACAAGATTTCTCCTTTGAATCGTCCTCTTTTTC CCTCTCTCTCATCCAGAGGTGTGGAGCATGTAAGATTGTGTACTTATTTT ATCTGACAGTGTCCATGATATAGCATCAGTATTAAATAAATAGTACTTAT ATTATAATTTCGCAAGCTATCTTTGCTTCGAAACGGAATTGCTTGTGGCC ATGTTAGACGAGTAAGCGCATGGTAGAAAAGAGCCCAGTGTACGGGACAG AACTGAACAAGCGCGAGTAGGAATGCTCATATACACACCTCTTATTGCCA CCTTTTCTCGTAGTGTTCAATTCCTCGATCCTCTCTATCGCCACCATGCG CCGCATCCTTTCTCTGCTCGCCCTGGGCGTCACGCTCGTCATGACTGCCG GTCAAGAGTTTACCCTGAAGAACGTCAAGGTCGCTGAAAGATCCAAGACA GCGAGGGATCAGTGGAGCATGAAGGGCAATCTAGATAATCCAGCGATGAA TGTTGTACCTGCAATCGGCCAGTTAGGTCTTACCGTGAATTTGCTGGATG TCAGCTTGGACCCGCTTGCCAGCACTGCTTTCGCGGCCACCAATTGCAAG CTGCTTCGAAACGGACGAGGCGTCAGGTGTAAGAAGATGGGTGCCCGGGT GTCCATTAAAAGGACCAGGCGTCCCAAGGGTGCCAAGGTGAAGAGCAGCA ACTCCAACTCGACTGGCGGGTACTACGGCGCGTCGGGAATGTTCCGCCGA TTGCAGTTCCTGCAGGACCCTGTGGTGACCCCCCTGACCGTTCAAGTGGT AGTGGGGAGCACAACTTTACCTGCGATTGTCTCTACATGCTCTGAGAGGA CCAAGGGTGCTGGGAGGATCACCAAAATCACTTGCACGCCAGGGCCCGCT CCTGTTACACCTGCCCCTACCGCCGCTTCTCCCTAATAATGTGAAGTGTG GACCCGGTTAGGTTTCCGACTGACTAGGCGGCCGGCCTCCATAGCATTGG GCAACCAATAGTTCATTCTGCTTGGTGATCTCTATGTAAGGAATGACTTG AATTAGAGATGCTCCACTGTCTGTGTAATACTACTTGTGTGTGTGAGTGT GGTCCTGTAACATGTCAGTGTCCGTAAGCGAAAGACTCGTCGGGAGTCAT TGTGAGTCGTGGGTTACTGAAGTGTGATTTTGGGCTTTCTTTCTGACTGC TGGTTGGAAACAAAGGAATGCCTTTACGACAAAAGAATGGAAAATAATAC CCCGGAAAGTATCCAGGTCTATTTTGTTCTTTGTATGTGGATTGTCCACT GCAGATCTCATCTCGAGAATTCCTGAAAAGGTCCTAAACCCATCTTGTTT CGCGAGGGTAGGTTCATCGACTTACAAGATTAGCCATGCGCAAGAATGAA GCAGGAGCTGAGATGCCTCCACAGAGTATTGTCATCGCTTGTGAAATGTC TCATGCATCCTACTTGAGCCATATCGAAAGATCTCGAGTCCCTCAACTCA ACACTTTTTCCCTTTCTTCCCGGCCCTGTTCTTCGTGGTAGTCTTGTGTC TAACATTGATATTCCCAAGGCCATGATGGAGAGAAGCTTTCTGGAGATTC GACAAAATGCTGACCAAACAAAGGAACATGGTCAGTCCGTTGGCCTTGTC CACCTCACTGGAAGAGGTAGCACGGTCAGGTTTAGACACCACCGGGTACA TCAGAAGCAACAAATGCTTTTTTTGCACATCTAG back to topprotein sequence of rna629 >rna629-protein ID=rna629-protein|Name=rna629|organism=Nannochloropsis gaditana|type=polypeptide|length=375bp MAWLKRAQLVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFTLKNVKVI DKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFA ASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSAS GMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRI TCTPGPTPLTRGLILISPVISIRGVPLSVCFLCVSVFLYYFSREAYECLP VLTSIRAPVFHVLAKTCRVHCKPSRMSDWSTLKYDFWLPSCLLVEFKKTC TCMIIRMGKRKFLVEGMQVFNFASKCRLILSRPNIFFDYPKLPCTIMMQE LRCLHTGFLFAYLFVCRIRCHLSYS back to topmRNA from alignment at CM002456.1:31364..32790+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna629 ID=rna629|Name=rna629|organism=Nannochloropsis gaditana|type=mRNA|length=1427bp|location=Sequence derived from alignment at CM002456.1:31364..32790+ (Nannochloropsis gaditana) ATGGCATGGTTAAAAAGAGCTCAATGTGTGTAAGTGACAGGACAGAAGAA
GTGCAATTAAGAGTACTCACATACATATCTCACATTTTCACGATTTTCAT
GCAGTGGTCAACGTTTCGATCTTCTCTATCACCACCATGCGCCGCGCCTT
TTTTTTGCTCGCCCTGGGCATCACACTTGTCATGACTGCCGGTCAGGATT
TGTTCACCCTCAAGAACGTCAAGGTGATTGATAAGTCCAAGACAGCGAGG
GATCAGTGGAGCATGAAGGGCAATCTAGATGACCCGACGATGACTGTTGT
ACCTTTGATCGGCCAGGAAGGTCTTACCGTGGAGTTGCAGGACATGGCCC
TCGCCACGCTTGAGAGCACGGCTTTCGCGGCCAGCGATTGCAAGTTGCGT
CGAAACGGACGAGGCGTCAGCTGTAAGACGAGGGGTGCTCGGGTGTCCAT
TAAAATGTCCAGGCGTCCCAAGGGTGCCTATGTCCAGAACAGCAATTACA
ACTCGACTGGCGGGTACTACAGTGCGTCAGGAATGTTCCGCCGATTGCAG
TTCCTGCAGGACCCTATTGTGTTCCCCCTAACCGTGGTATTGAATGTGCC
CAGCATACCTTTCCCACCATCTGCCATGGTCTCCTCATGCTCTGAGAAGA
TCAAGGGTGCTGGGAGGACCACCAGGATCACGTGCACGCCCGGGCCTACT
CCTGTTACACCGGCCCCTACCACCGCTTAATTAATAGGAAGTGTGGAACC
GGCAAGACATGCTGGTCCTCAGCTGACTAGGGGCTTAATTTTAATATCAC
CGGGTAGCTAGTTCTGCCGTCTGCTCGGTAATGTCTGTGTAAGGAGTGAT
TTCAATTAGAGGTGTCCCGCTGTCTGTGTGTTTTTTGTGTGTGAGTGTGT
TCCTGTACTATTTTAGTGTCTGTcagtttccttcccctggaCATGATCCT
CGCCTTCTTGCCGTCTGCGATAGCAATTTAGCGAGAAGCCTATGAGTGCC
TACCAGTGTTGACTTCAATACGAGCACCTGTTTTCCATGTTCTAGCGAAG
ACTTGCAGGGTTCATTGTAAGCCGTCGCGCATGTCTGACTGGTCTACACT
TAAGTATGATTTTtggcttccctcctgcctcctaGTTGAATTCAAGAAGA
CATGTACTTGCATGATAATAAgaatgggaaaaagaaagttcCTTGTGGAA
GGTATGCAGGTCTTTAATTTTGCCTCTAAATGTCGAGTGTCCATTGCTTA
TGAATCGCGATTTCCTGGAAACGTCCCTAGCTCATCTTGAGTCGTCCGAA
TATATTCTTTGATTATCCCAAACTGCCATGCACAATAATGATGCAGGAGC
TGAGATGCCTTCATACAGGTTTTCTGTTCGCATATCTGTTTGTTTGCCGA
ATAAGGTGTCATCTTTCTTACTCCTAG back to topCoding sequence (CDS) from alignment at CM002456.1:31364..32790+ >rna629 ID=rna629|Name=rna629|organism=Nannochloropsis gaditana|type=CDS|length=6768bp|location=Sequence derived from alignment at CM002456.1:31364..32790+ (Nannochloropsis gaditana) ATGGCATGGTTAAAAAGAGCTCAATTGGTCAACGTTTCGATCTTCTCTAT CACCACCATGCGCCGCGCCTTTTTTTTGCTCGCCCTGGGCATCACACTTG TCATGACTGCCGGTCAGGATTTGTTCACCCTCAAGAACGTCAAGGTGATT GATAAGTCCAAGACAGCGAGGGATCAGTGGAGCATGAAGGGCAATCTAGA TGACCCGACGATGACTGTTGTACCTTTGATCGGCCAGGAAGGTCTTACCG TGGAGTTGCAGGACATGGCCCTCGCCACGCTTGAGAGCACGGCTTTCGCG GCCAGCGATTGCAAGTTGCGTCGAAACGGACGAGGCGTCAGCTGTAAGAC GAGGGGTGCTCGGGTGTCCATTAAAATGTCCAGGCGTCCCAAGGGTGCCT ATGTCCAGAACAGCAATTACAACTCGACTGGCGGGTACTACAGTGCGTCA GGAATGTTCCGCCGATTGCAGTTCCTGCAGGACCCTATTGTGTTCCCCCT AACCGTGGTATTGAATGTGCCCAGCATACCTTTCCCACCATCTGCCATGG TCTCCTCATGCTCTGAGAAGATCAAGGGTGCTGGGAGGACCACCAGGATC ACGTGCACGCCCGGGCCTACTCCTCTGACTAGGGGCTTAATTTTAATATC ACCGGTGATTTCAATTAGAGGTGTCCCGCTGTCTGTGTGTTTTTTGTGTG TGAGTGTGTTCCTGTACTATTTTAGTCGAGAAGCCTATGAGTGCCTACCA GTGTTGACTTCAATACGAGCACCTGTTTTCCATGTTCTAGCGAAGACTTG CAGGGTTCATTGTAAGCCGTCGCGCATGTCTGACTGGTCTACACTTAAGT ATGATTTTtggcttccctcctgcctcctaGTTGAATTCAAGAAGACATGT ACTTGCATGATAATAAgaatgggaaaaagaaagttcCTTGTGGAAGGTAT GCAGGTCTTTAATTTTGCCTCTAAATGTCGACTCATCTTGAGTCGTCCGA ATATATTCTTTGATTATCCCAAACTGCCATGCACAATAATGATGCAGGAG CTGAGATGCCTTCATACAGGTTTTCTGTTCGCATATCTGTTTGTTTGCCG AATAAGGTGTCATCTTTCTTACTCCTAGATGGCATGGTTAAAAAGAGCTC AATTGGTCAACGTTTCGATCTTCTCTATCACCACCATGCGCCGCGCCTTT TTTTTGCTCGCCCTGGGCATCACACTTGTCATGACTGCCGGTCAGGATTT GTTCACCCTCAAGAACGTCAAGGTGATTGATAAGTCCAAGACAGCGAGGG ATCAGTGGAGCATGAAGGGCAATCTAGATGACCCGACGATGACTGTTGTA CCTTTGATCGGCCAGGAAGGTCTTACCGTGGAGTTGCAGGACATGGCCCT CGCCACGCTTGAGAGCACGGCTTTCGCGGCCAGCGATTGCAAGTTGCGTC GAAACGGACGAGGCGTCAGCTGTAAGACGAGGGGTGCTCGGGTGTCCATT AAAATGTCCAGGCGTCCCAAGGGTGCCTATGTCCAGAACAGCAATTACAA CTCGACTGGCGGGTACTACAGTGCGTCAGGAATGTTCCGCCGATTGCAGT TCCTGCAGGACCCTATTGTGTTCCCCCTAACCGTGGTATTGAATGTGCCC AGCATACCTTTCCCACCATCTGCCATGGTCTCCTCATGCTCTGAGAAGAT CAAGGGTGCTGGGAGGACCACCAGGATCACGTGCACGCCCGGGCCTACTC CTCTGACTAGGGGCTTAATTTTAATATCACCGGTGATTTCAATTAGAGGT GTCCCGCTGTCTGTGTGTTTTTTGTGTGTGAGTGTGTTCCTGTACTATTT TAGTCGAGAAGCCTATGAGTGCCTACCAGTGTTGACTTCAATACGAGCAC CTGTTTTCCATGTTCTAGCGAAGACTTGCAGGGTTCATTGTAAGCCGTCG CGCATGTCTGACTGGTCTACACTTAAGTATGATTTTtggcttccctcctg cctcctaGTTGAATTCAAGAAGACATGTACTTGCATGATAATAAgaatgg gaaaaagaaagttcCTTGTGGAAGGTATGCAGGTCTTTAATTTTGCCTCT AAATGTCGACTCATCTTGAGTCGTCCGAATATATTCTTTGATTATCCCAA ACTGCCATGCACAATAATGATGCAGGAGCTGAGATGCCTTCATACAGGTT TTCTGTTCGCATATCTGTTTGTTTGCCGAATAAGGTGTCATCTTTCTTAC TCCTAGATGGCATGGTTAAAAAGAGCTCAATTGGTCAACGTTTCGATCTT CTCTATCACCACCATGCGCCGCGCCTTTTTTTTGCTCGCCCTGGGCATCA CACTTGTCATGACTGCCGGTCAGGATTTGTTCACCCTCAAGAACGTCAAG GTGATTGATAAGTCCAAGACAGCGAGGGATCAGTGGAGCATGAAGGGCAA TCTAGATGACCCGACGATGACTGTTGTACCTTTGATCGGCCAGGAAGGTC TTACCGTGGAGTTGCAGGACATGGCCCTCGCCACGCTTGAGAGCACGGCT TTCGCGGCCAGCGATTGCAAGTTGCGTCGAAACGGACGAGGCGTCAGCTG TAAGACGAGGGGTGCTCGGGTGTCCATTAAAATGTCCAGGCGTCCCAAGG GTGCCTATGTCCAGAACAGCAATTACAACTCGACTGGCGGGTACTACAGT GCGTCAGGAATGTTCCGCCGATTGCAGTTCCTGCAGGACCCTATTGTGTT CCCCCTAACCGTGGTATTGAATGTGCCCAGCATACCTTTCCCACCATCTG CCATGGTCTCCTCATGCTCTGAGAAGATCAAGGGTGCTGGGAGGACCACC AGGATCACGTGCACGCCCGGGCCTACTCCTCTGACTAGGGGCTTAATTTT AATATCACCGGTGATTTCAATTAGAGGTGTCCCGCTGTCTGTGTGTTTTT TGTGTGTGAGTGTGTTCCTGTACTATTTTAGTCGAGAAGCCTATGAGTGC CTACCAGTGTTGACTTCAATACGAGCACCTGTTTTCCATGTTCTAGCGAA GACTTGCAGGGTTCATTGTAAGCCGTCGCGCATGTCTGACTGGTCTACAC TTAAGTATGATTTTtggcttccctcctgcctcctaGTTGAATTCAAGAAG ACATGTACTTGCATGATAATAAgaatgggaaaaagaaagttcCTTGTGGA AGGTATGCAGGTCTTTAATTTTGCCTCTAAATGTCGACTCATCTTGAGTC GTCCGAATATATTCTTTGATTATCCCAAACTGCCATGCACAATAATGATG CAGGAGCTGAGATGCCTTCATACAGGTTTTCTGTTCGCATATCTGTTTGT TTGCCGAATAAGGTGTCATCTTTCTTACTCCTAGATGGCATGGTTAAAAA GAGCTCAATTGGTCAACGTTTCGATCTTCTCTATCACCACCATGCGCCGC GCCTTTTTTTTGCTCGCCCTGGGCATCACACTTGTCATGACTGCCGGTCA GGATTTGTTCACCCTCAAGAACGTCAAGGTGATTGATAAGTCCAAGACAG CGAGGGATCAGTGGAGCATGAAGGGCAATCTAGATGACCCGACGATGACT GTTGTACCTTTGATCGGCCAGGAAGGTCTTACCGTGGAGTTGCAGGACAT GGCCCTCGCCACGCTTGAGAGCACGGCTTTCGCGGCCAGCGATTGCAAGT TGCGTCGAAACGGACGAGGCGTCAGCTGTAAGACGAGGGGTGCTCGGGTG TCCATTAAAATGTCCAGGCGTCCCAAGGGTGCCTATGTCCAGAACAGCAA TTACAACTCGACTGGCGGGTACTACAGTGCGTCAGGAATGTTCCGCCGAT TGCAGTTCCTGCAGGACCCTATTGTGTTCCCCCTAACCGTGGTATTGAAT GTGCCCAGCATACCTTTCCCACCATCTGCCATGGTCTCCTCATGCTCTGA GAAGATCAAGGGTGCTGGGAGGACCACCAGGATCACGTGCACGCCCGGGC CTACTCCTCTGACTAGGGGCTTAATTTTAATATCACCGGTGATTTCAATT AGAGGTGTCCCGCTGTCTGTGTGTTTTTTGTGTGTGAGTGTGTTCCTGTA CTATTTTAGTCGAGAAGCCTATGAGTGCCTACCAGTGTTGACTTCAATAC GAGCACCTGTTTTCCATGTTCTAGCGAAGACTTGCAGGGTTCATTGTAAG CCGTCGCGCATGTCTGACTGGTCTACACTTAAGTATGATTTTtggcttcc ctcctgcctcctaGTTGAATTCAAGAAGACATGTACTTGCATGATAATAA gaatgggaaaaagaaagttcCTTGTGGAAGGTATGCAGGTCTTTAATTTT GCCTCTAAATGTCGACTCATCTTGAGTCGTCCGAATATATTCTTTGATTA TCCCAAACTGCCATGCACAATAATGATGCAGGAGCTGAGATGCCTTCATA CAGGTTTTCTGTTCGCATATCTGTTTGTTTGCCGAATAAGGTGTCATCTT TCTTACTCCTAGATGGCATGGTTAAAAAGAGCTCAATTGGTCAACGTTTC GATCTTCTCTATCACCACCATGCGCCGCGCCTTTTTTTTGCTCGCCCTGG GCATCACACTTGTCATGACTGCCGGTCAGGATTTGTTCACCCTCAAGAAC GTCAAGGTGATTGATAAGTCCAAGACAGCGAGGGATCAGTGGAGCATGAA GGGCAATCTAGATGACCCGACGATGACTGTTGTACCTTTGATCGGCCAGG AAGGTCTTACCGTGGAGTTGCAGGACATGGCCCTCGCCACGCTTGAGAGC ACGGCTTTCGCGGCCAGCGATTGCAAGTTGCGTCGAAACGGACGAGGCGT CAGCTGTAAGACGAGGGGTGCTCGGGTGTCCATTAAAATGTCCAGGCGTC CCAAGGGTGCCTATGTCCAGAACAGCAATTACAACTCGACTGGCGGGTAC TACAGTGCGTCAGGAATGTTCCGCCGATTGCAGTTCCTGCAGGACCCTAT TGTGTTCCCCCTAACCGTGGTATTGAATGTGCCCAGCATACCTTTCCCAC CATCTGCCATGGTCTCCTCATGCTCTGAGAAGATCAAGGGTGCTGGGAGG ACCACCAGGATCACGTGCACGCCCGGGCCTACTCCTCTGACTAGGGGCTT AATTTTAATATCACCGGTGATTTCAATTAGAGGTGTCCCGCTGTCTGTGT GTTTTTTGTGTGTGAGTGTGTTCCTGTACTATTTTAGTCGAGAAGCCTAT GAGTGCCTACCAGTGTTGACTTCAATACGAGCACCTGTTTTCCATGTTCT AGCGAAGACTTGCAGGGTTCATTGTAAGCCGTCGCGCATGTCTGACTGGT CTACACTTAAGTATGATTTTtggcttccctcctgcctcctaGTTGAATTC AAGAAGACATGTACTTGCATGATAATAAgaatgggaaaaagaaagttcCT TGTGGAAGGTATGCAGGTCTTTAATTTTGCCTCTAAATGTCGACTCATCT TGAGTCGTCCGAATATATTCTTTGATTATCCCAAACTGCCATGCACAATA ATGATGCAGGAGCTGAGATGCCTTCATACAGGTTTTCTGTTCGCATATCT GTTTGTTTGCCGAATAAGGTGTCATCTTTCTTACTCCTAGATGGCATGGT TAAAAAGAGCTCAATTGGTCAACGTTTCGATCTTCTCTATCACCACCATG CGCCGCGCCTTTTTTTTGCTCGCCCTGGGCATCACACTTGTCATGACTGC CGGTCAGGATTTGTTCACCCTCAAGAACGTCAAGGTGATTGATAAGTCCA AGACAGCGAGGGATCAGTGGAGCATGAAGGGCAATCTAGATGACCCGACG ATGACTGTTGTACCTTTGATCGGCCAGGAAGGTCTTACCGTGGAGTTGCA GGACATGGCCCTCGCCACGCTTGAGAGCACGGCTTTCGCGGCCAGCGATT GCAAGTTGCGTCGAAACGGACGAGGCGTCAGCTGTAAGACGAGGGGTGCT CGGGTGTCCATTAAAATGTCCAGGCGTCCCAAGGGTGCCTATGTCCAGAA CAGCAATTACAACTCGACTGGCGGGTACTACAGTGCGTCAGGAATGTTCC GCCGATTGCAGTTCCTGCAGGACCCTATTGTGTTCCCCCTAACCGTGGTA TTGAATGTGCCCAGCATACCTTTCCCACCATCTGCCATGGTCTCCTCATG CTCTGAGAAGATCAAGGGTGCTGGGAGGACCACCAGGATCACGTGCACGC CCGGGCCTACTCCTCTGACTAGGGGCTTAATTTTAATATCACCGGTGATT TCAATTAGAGGTGTCCCGCTGTCTGTGTGTTTTTTGTGTGTGAGTGTGTT CCTGTACTATTTTAGTCGAGAAGCCTATGAGTGCCTACCAGTGTTGACTT CAATACGAGCACCTGTTTTCCATGTTCTAGCGAAGACTTGCAGGGTTCAT TGTAAGCCGTCGCGCATGTCTGACTGGTCTACACTTAAGTATGATTTTtg gcttccctcctgcctcctaGTTGAATTCAAGAAGACATGTACTTGCATGA TAATAAgaatgggaaaaagaaagttcCTTGTGGAAGGTATGCAGGTCTTT AATTTTGCCTCTAAATGTCGACTCATCTTGAGTCGTCCGAATATATTCTT TGATTATCCCAAACTGCCATGCACAATAATGATGCAGGAGCTGAGATGCC TTCATACAGGTTTTCTGTTCGCATATCTGTTTGTTTGCCGAATAAGGTGT CATCTTTCTTACTCCTAG back to top
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