EWM30036.1, cds629 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585112664|gb|EWM30036.1| (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0 Query: 1 MAWLKRAQLVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLTRGLILISPVISIRGVPLSVCFLCVSVFLYYFSREAYECLPVLTSIRAPVFHVLAKTCRVHCKPSRMSDWSTLKYDFWLPSCLLVEFKKTCTCMIIRMGKRKFLVEGMQVFNFASKCRLILSRPNIFFDYPKLPCTIMMQELRCLHTGFLFAYLFVCRIRCHLSYS 375 MAWLKRAQLVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLTRGLILISPVISIRGVPLSVCFLCVSVFLYYFSREAYECLPVLTSIRAPVFHVLAKTCRVHCKPSRMSDWSTLKYDFWLPSCLLVEFKKTCTCMIIRMGKRKFLVEGMQVFNFASKCRLILSRPNIFFDYPKLPCTIMMQELRCLHTGFLFAYLFVCRIRCHLSYS Sbjct: 1 MAWLKRAQLVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLTRGLILISPVISIRGVPLSVCFLCVSVFLYYFSREAYECLPVLTSIRAPVFHVLAKTCRVHCKPSRMSDWSTLKYDFWLPSCLLVEFKKTCTCMIIRMGKRKFLVEGMQVFNFASKCRLILSRPNIFFDYPKLPCTIMMQELRCLHTGFLFAYLFVCRIRCHLSYS 375
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|553189589|ref|XP_005855033.1| (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >gi|422294031|gb|EKU21331.1| hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 389.037 bits (998), Expect = 1.267e-133 Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0 Query: 20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLT 210 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGA VQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTP+T Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGANVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPVT 191
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585112674|gb|EWM30045.1| (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 275.018 bits (702), Expect = 8.226e-89 Identity = 140/199 (70.35%), Postives = 159/199 (79.90%), Query Frame = 0 Query: 20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLTRGLILISP 218 MRR LLALG+TLVMTAGQ+ FTLKNVKV ++SKTARDQWSMKGNLD+P M VVP IGQ GLTV L D++L L STAFAA++CKL RNGRGV CK GARVSIK +RRPKGA V++SN NSTGGYY ASGMFRRLQFLQDP+V PLTV + V S P A+VS+CSE+ KGAGR T+ITCTPGP P+T SP Sbjct: 1 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRRPKGAKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGSTTLP--AIVSTCSERTKGAGRITKITCTPGPAPVTPAPTAASP 196
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585099510|gb|EWM20135.1| (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 251.136 bits (640), Expect = 1.742e-79 Identity = 128/185 (69.19%), Postives = 149/185 (80.54%), Query Frame = 0 Query: 20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTP 204 MR LLALGITLVMTAGQ+ FTLKN+KV + KTARDQWSMKGNLD+PTM VVP+IGQ GLTV L D +L+ L S AFAA++CKL RN RGVSCK+ GARV IK +RRPK A V++S+YNSTGGYY+ASGMFRRLQFLQD +V PLTV L V + P A+VS+CSE+ K AGR T+ITCTP Sbjct: 1 MRCILSLLALGITLVMTAGQE-FTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRRPKAAKVKSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTTTLP--AIVSTCSERTKSAGRITKITCTP 182
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585099453|gb|EWM20105.1| (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana]) HSP 1 Score: 242.276 bits (617), Expect = 1.278e-75 Identity = 131/185 (70.81%), Postives = 150/185 (81.08%), Query Frame = 0 Query: 9 LVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKG 193 + N SI SI TMRR LLALG+TLVMTAGQ+ FTLKNVKV ++SKTARDQWSMKGNLD+P M VVP IGQ GLTV L D++L L STAFAA++CKL RNGRGVSCK GARVSIK +RRPKGA V++SN NSTGGYY ASGMFRRLQFLQDP+V P+TV + V S P A+VS+CSE+ KG Sbjct: 26 MFNSSILSIATMRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRRPKGAKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKVGSTTLP--AIVSTCSERTKG 207
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585108538|gb|EWM26485.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 188.348 bits (477), Expect = 3.027e-54 Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 0 Query: 20 MRRAFFLLALGIT----LVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGP 206 MR A LL LG+T LV TAGQDL LK+++ +D+S T +D W MKGN++DP++T+VP IGQ GLTVELQD A L + AFAASDC++ +GR +CK RGARVSIK SRRPK V +YNSTGGYYS +G FR L FL++P+V PLT L + S ++SC + + +GR T C PGP Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDL-NLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGSVL--SDTLTSCYDLARKSGRNTISHCEPGP 191
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585108537|gb|EWM26484.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 188.734 bits (478), Expect = 9.795e-54 Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 0 Query: 20 MRRAFFLLALGIT----LVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGP 206 MR A LL LG+T LV TAGQDL LK+++ +D+S T +D W MKGN++DP++T+VP IGQ GLTVELQD A L + AFAASDC++ +GR +CK RGARVSIK SRRPK V +YNSTGGYYS +G FR L FL++P+V PLT L + S ++SC + + +GR T C PGP Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDL-NLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGSVL--SDTLTSCYDLARKSGRNTISHCEPGP 191
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585100200|gb|EWM20521.1| (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 185.267 bits (469), Expect = 2.599e-53 Identity = 102/194 (52.58%), Postives = 127/194 (65.46%), Query Frame = 0 Query: 20 MRRAFFLLALGITL----VMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGP 206 MR LLALGITL V TAGQDL LK+++ +D+S T +D W MKGN++DP++T VP IGQ GLTVELQD A L + AFAASDC++ +GR +CK RGARVSIK SRRPK V +YNSTGGYYS +G FR L FL++P+V PLT L V S + SC + + + R+T C PGP Sbjct: 1 MRSPLSLLALGITLGSTLVTTAGQDL-NLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVL--SDTLISCYDLARKSARSTISQCEPGP 191
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585109630|gb|EWM27399.1| (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 179.489 bits (454), Expect = 1.218e-50 Identity = 99/194 (51.03%), Postives = 125/194 (64.43%), Query Frame = 0 Query: 20 MRRAFFLLALGITL----VMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGP 206 MR LLALGITL V TAGQDL LK+++ +D+S T +D W MKG+++DP++T+V IGQ+GLTVELQD A L + FAASDC++ +GR +CK RGARVSIK SRRPK V +YNSTGGYYS +G FR L FL++P+V PLT L V S ++ C + GR T C PGP Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDL-NLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVDESVL--SDTLTLCYNLPRKNGRNTISHCEPGP 191
BLAST of EWM30036.1 vs. NCBI_GenBank
Match: gi|585109627|gb|EWM27397.1| (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 175.637 bits (444), Expect = 1.002e-47 Identity = 95/194 (48.97%), Postives = 122/194 (62.89%), Query Frame = 0 Query: 20 MRRAFFLLALGITL----VMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGP 206 MR LLALGITL V T GQ L LK+++ +D+S T +D W MKG+++DP++T+VP IGQ+GLTVELQD L + FAA DC++ +G+ +CK RGARV IK SRRPK V YNSTGGYYS +G FRRL FL++P+V PLT L V S ++SC + + GR C PGP Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSL-NLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNSTGGYYSVTGTFRRLTFLENPVVSPLTAALTVNESVL--SDTLTSCYDLPRKNGRNPITHCEPGP 259 The following BLAST results are available for this feature:
BLAST of EWM30036.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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