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Properties
| Property Name | Value |
|---|
| Product | kef-type k transport systems -binding component |
| Orig transcript id | gnl|cribi|Naga_100832g2.990.mrna |
| Orig protein id | gnl|cribi|Naga_100832g2.990 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:163981..166137 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6280 ID=rna6280|Name=rna6280|organism=Nannochloropsis gaditana|type=mRNA|length=1033bp
AATGCACAGAACATTCAAAAGGCGTCATATTTTCAATCCTCGAACCAATG
TTATCGGAAGCTTTCTAGCTGTCCGTCCGGTACCGACACTCGCTCCTTCG
AGGGGAGGACTGTCGCCCACGCTGATGGAGAAGCTTCGTTTTGGTCCGTG
TGATGCAAGTTAAAATTGAAATGCTTCGTGTCCTTCCTAAGTGGTGTATT
CGTCCTGGCTTGCCATCAAGAGAGTTTGTTTTTTTTCCGCGAACAGAATA
GAAATGACTGGGGACAAATCAAGCATGGATTCTTCTTCATGTAGACCTCT
TAAGTAATCTTGCGGTCGTCGCATCAGTGGCAATGGTTTTGTTCCACAAA
ATGTCAACGATGTCTGTTTAAGTCCCGTGCTTCATAAGTAACTACCTCGC
CCGCACAGCAGCTCGCACTTTATTGAGAAGGCGTGCAACCGGGATAGAGC
CATGAGTGAAGACCTTCAGCAGCGGTTTGAGGAGGCAGCTAAGCGCATTG
CCGCCTGGAAACCCGCCTCAAAGGAGCCCAGCGACGAGGAGAAACTCACT
GTCTACGCCCTCTACAAACAAGCGACTGTAGGGGATTGCAACACCCCCAA
GTAAGTCATGGTGGGGGGACCGATGGCCTTCGCGGGGGGCGGGAGGCCTG
CGGGCATCTGTCAGGGGCCATCGTCATCTGCTGTGCCTTCTCCTGACCCG
AAGCCTGCTCCTAAACTTCCTACCATCCGCCGTGGATGGATGGTCACGAA
CTTCCCCATCGACTCTCACGTCGTCGACACTCCCCTCCCTATCCTGCGGC
CGCAGGCCCGGGCTTCTCGACTTCACAGGGAGACGGAAACACGCCGCGTG
GGAGGGGAAGAAAGGGATGGCAAAGGCGGCGGCCATGACCGCCTACATTG
CCGAAGTGGATCGGCAGATCCAGGTGTACGGTACCAAGGCATAACATATA
TATAAGATGATTGATGGTGGGAGGGAAATTTGCAGGCAGTGTGGTGGAAG
AAGAGGAGGAAGGGGCTGAGGCCTTTCGTGCTC back to topprotein sequence of rna6280 >rna6280-protein ID=rna6280-protein|Name=rna6280|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MTATTVGFGDFYPTSTLGRFVAIVAAYTGIVGIALPSTIIGKSFIDVYFR
VLEERKKEEQLLKAEREREEEARKARGDTGTGLMALLCCRRRRRAPAVVP
GMEGGREGGKEGGKEGGKEGGRLVGGLKTEADSTPSQSPRRPWRDFYIER
ENTVAQRVLRKEKELAEEKAKEDALVREIEAQVWAQEQEERAQVGAEGEE
EGRARCDGKEGGKCQGYTLAASVLEGRGSNVPSAHLMTCIHQANRGGASA
SAALQAIPLAKKVRKQQQQIEKLAHIVGDQLHHIHALSEALTEMERATVY
LMSRFDELESD back to topmRNA from alignment at CM002468.1:163981..166137- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6280 ID=rna6280|Name=rna6280|organism=Nannochloropsis gaditana|type=mRNA|length=2157bp|location=Sequence derived from alignment at CM002468.1:163981..166137- (Nannochloropsis gaditana)
AGTTCCCGGACGGAGAGTACATTCGAAAGAACGTTCATGGTGGGGGCACA
GAGCAGTCGCCGTTCACCTCCATTCCCGTTGCGGCCTATTGGGTCATCAT
GACGGCCACCACCGTGGGATGTAAGAGCCAACGGAGGGAGGGTGGAAAGG
AGGGCGGGGAAAGGCGGTTAGGGGGGGGACGCGTTTTCAGGCGTCAGTGT
AACCATGGCGCTTCCCCTAGTGGCTTGCTGACCCCTCTTTCCTTCCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCGGTCCCAGTC
GGAGATTTCTACCCCACCTCCACACTGGGTCGCTTCGTGGCCATCGTCGC
TGCCTACACGGGCATCGTCGGCATCGCCCTCCCCTCCACCATCATCGGCA
AGAGCTTCATCGACGTCTACTTCCGGGTAGGTTCCCCCCCCCTTGCATCC
CTTGTGTGCTTGTGTGGGGGGAGAGTCCTGCTGCTTGCTGTTGTCCTTTC
TACGCGTTGATTTGCGCTCTCTCTCGGCTTTATTCGGGGGGAGGGGTGTG
TGGGTGCCGGAGGTTTCTTGGCGACTTTAGGTGCTTCTCGAACCCAATCA
CTTCTCCGGGTCCGGGGCAGAGCCTTTGGGGGCACTATAGACCTCCCTTT
GGTGTCCCTGTTCATGTCTCCTCCACCGACGCCCACCTCGGACCCCGTGT
CTTCCAGGTGTTGGAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCGG
AGAGAGAGCGGGAAGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCACG
GGCTTGATGGCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGT
GGTGCCAGGGATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGG
AGGGGGGGAAGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCA
GATTCCACGCCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACAT
CGAGCGGGAGAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAAT
TGGCGGAGGAGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCC
CAAGTCTGGGCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGG
CGAGGAAGAGGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCC
AGGGGTACACGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTA
CCTTCGGCCCATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGC
CTCAGCCTCGGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGGTAGGGG
GGAGGGAGGGCGGGGTCGAGGGAGGGGGGAAGGGAGGGGTCGAGGGAGGG
GTGGTGGACGTTCGTGGGGATGGAAACTGGGAGTGGTCTCGTACAGTGGC
AGATGAACGGGAATCTTCATGGCACAGGTACGGAAACAACAGCAGCAGAT
AGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCACCATATCCATGCCC
TTTCGGAAGCGTTGACCGAGATGGTGAGTGCGGGGGAGGGGAGGGGGCGA
GATAGCGCCCGGGGAGAATGGATGTGGTCCTCGAGATGTTGTCATTGAGC
TTGCACCTCCCTCACAGGAACGGGCGACGGTCTATCTGATGAGTCGCTTC
GACGAACTTGAAAGCGATTGAGGCCCGGCCCATATCCAGGCTGCAAGGAG
AGCGGCCCATATCGTGCGATCCAGGCTGCAAGGAGAGCGTGCGGTGCCAA
GTTGAACGAAAAGCAAAAGCCGCACGAGCCCGTGACTGGAAGAGGAGTAC
CGCACATATAGATAAATCTATATATATATATGTATACGCCAAATGTAAAT
TTTGGTCCGGAAGGACAATAGGTTTGGCACTAAGTGCAAAACACGGCAAT
AAACGAGGCGAAAGTTGGGGTGGGGGCGGGAAAAGGGATTCTTCAACGAG
TCGGTAGTAAGACGCTGAAACCAATGCCGCCAACTCGATTTAAAAGTTCA
CGCCTTCGTAGATGATTGGACGAGCATGTGAAAGTCGATGGAGCAATGAA
AACCCAACGTTTTGTTGTTTTCTTTGGTAAGCAATGTCAATCCATTGGAT
CGTGTCT back to topCoding sequence (CDS) from alignment at CM002468.1:163981..166137- >rna6280 ID=rna6280|Name=rna6280|organism=Nannochloropsis gaditana|type=CDS|length=4680bp|location=Sequence derived from alignment at CM002468.1:163981..166137- (Nannochloropsis gaditana)
GAACGGGCGACGGTCTATCTGATGAGTCGCTTCGACGAACTTGAAAGCGA
TTGAGTACGGAAACAACAGCAGCAGATAGAGAAGCTCGCGCACATAGTGG
GCGATCAATTGCACCATATCCATGCCCTTTCGGAAGCGTTGACCGAGATG
GTGTTGGAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCGGAGAGAGA
GCGGGAAGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCACGGGCTTGA
TGGCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCCA
GGGATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGGG
GAAGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCAGATTCCA
CGCCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACATCGAGCGG
GAGAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGGA
GGAGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTCT
GGGCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGAA
GAGGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGTA
CACGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCGG
CCCATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGCC
TCGGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGTCGGAGATTTCTAC
CCCACCTCCACACTGGGTCGCTTCGTGGCCATCGTCGCTGCCTACACGGG
CATCGTCGGCATCGCCCTCCCCTCCACCATCATCGGCAAGAGCTTCATCG
ACGTCTACTTCCGGATGACGGCCACCACCGTGGGATGAACGGGCGACGGT
CTATCTGATGAGTCGCTTCGACGAACTTGAAAGCGATTGAGTACGGAAAC
AACAGCAGCAGATAGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCAC
CATATCCATGCCCTTTCGGAAGCGTTGACCGAGATGGTGTTGGAGGAGCG
AAAAAAGGAGGAACAGCTCCTCAAGGCGGAGAGAGAGCGGGAAGAAGAGG
CCAGGAAAGCGAGGGGGGACACGGGCACGGGCTTGATGGCATTGCTCTGT
TGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCCAGGGATGGAGGGGGG
GAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGGGGAAGGAGGGGGGAA
GACTTGTCGGGGGATTAAAAACGGAGGCAGATTCCACGCCCTCCCAGTCC
CCCCGACGGCCCTGGCGGGATTTCTACATCGAGCGGGAGAACACGGTGGC
GCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGGAGGAGAAAGCGAAGG
AGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTCTGGGCCCAAGAGCAG
GAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGAAGAGGGCCGGGCCCG
GTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGTACACGCTGGCCGCTT
CGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCGGCCCATTTGATGACC
TGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGCCTCGGCGGCTTTACA
GGCCATTCCCTTGGCGAAGAAGTCGGAGATTTCTACCCCACCTCCACACT
GGGTCGCTTCGTGGCCATCGTCGCTGCCTACACGGGCATCGTCGGCATCG
CCCTCCCCTCCACCATCATCGGCAAGAGCTTCATCGACGTCTACTTCCGG
ATGACGGCCACCACCGTGGGATGAACGGGCGACGGTCTATCTGATGAGTC
GCTTCGACGAACTTGAAAGCGATTGAGTACGGAAACAACAGCAGCAGATA
GAGAAGCTCGCGCACATAGTGGGCGATCAATTGCACCATATCCATGCCCT
TTCGGAAGCGTTGACCGAGATGGTGTTGGAGGAGCGAAAAAAGGAGGAAC
AGCTCCTCAAGGCGGAGAGAGAGCGGGAAGAAGAGGCCAGGAAAGCGAGG
GGGGACACGGGCACGGGCTTGATGGCATTGCTCTGTTGTCGGCGGCGACG
GCGGGCCCCCGCGGTGGTGCCAGGGATGGAGGGGGGGAGGGAGGGAGGGA
AGGAGGGAGGGAAGGAGGGGGGGAAGGAGGGGGGAAGACTTGTCGGGGGA
TTAAAAACGGAGGCAGATTCCACGCCCTCCCAGTCCCCCCGACGGCCCTG
GCGGGATTTCTACATCGAGCGGGAGAACACGGTGGCGCAGCGGGTGCTAC
GGAAGGAGAAGGAATTGGCGGAGGAGAAAGCGAAGGAGGACGCGCTGGTG
CGGGAGATCGAAGCCCAAGTCTGGGCCCAAGAGCAGGAGGAACGGGCACA
GGTCGGGGCCGAGGGCGAGGAAGAGGGCCGGGCCCGGTGCGACGGGAAAG
AGGGAGGGAAATGCCAGGGGTACACGCTGGCCGCTTCGGTCTTGGAAGGG
CGGGGGAGCAACGTACCTTCGGCCCATTTGATGACCTGCATCCACCAAGC
GAATCGGGGGGGGGCCTCAGCCTCGGCGGCTTTACAGGCCATTCCCTTGG
CGAAGAAGTCGGAGATTTCTACCCCACCTCCACACTGGGTCGCTTCGTGG
CCATCGTCGCTGCCTACACGGGCATCGTCGGCATCGCCCTCCCCTCCACC
ATCATCGGCAAGAGCTTCATCGACGTCTACTTCCGGATGACGGCCACCAC
CGTGGGATGAACGGGCGACGGTCTATCTGATGAGTCGCTTCGACGAACTT
GAAAGCGATTGAGTACGGAAACAACAGCAGCAGATAGAGAAGCTCGCGCA
CATAGTGGGCGATCAATTGCACCATATCCATGCCCTTTCGGAAGCGTTGA
CCGAGATGGTGTTGGAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCG
GAGAGAGAGCGGGAAGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCAC
GGGCTTGATGGCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGG
TGGTGCCAGGGATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAG
GAGGGGGGGAAGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGC
AGATTCCACGCCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACA
TCGAGCGGGAGAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAA
TTGGCGGAGGAGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGC
CCAAGTCTGGGCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGG
GCGAGGAAGAGGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGC
CAGGGGTACACGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGT
ACCTTCGGCCCATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGG
CCTCAGCCTCGGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGTCGGAG
ATTTCTACCCCACCTCCACACTGGGTCGCTTCGTGGCCATCGTCGCTGCC
TACACGGGCATCGTCGGCATCGCCCTCCCCTCCACCATCATCGGCAAGAG
CTTCATCGACGTCTACTTCCGGATGACGGCCACCACCGTGGGATGAACGG
GCGACGGTCTATCTGATGAGTCGCTTCGACGAACTTGAAAGCGATTGAGT
ACGGAAACAACAGCAGCAGATAGAGAAGCTCGCGCACATAGTGGGCGATC
AATTGCACCATATCCATGCCCTTTCGGAAGCGTTGACCGAGATGGTGTTG
GAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCGGAGAGAGAGCGGGA
AGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCACGGGCTTGATGGCAT
TGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCCAGGGATG
GAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGGGGAAGGA
GGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCAGATTCCACGCCCT
CCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACATCGAGCGGGAGAAC
ACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGGAGGAGAA
AGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTCTGGGCCC
AAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGAAGAGGGC
CGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGTACACGCT
GGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCGGCCCATT
TGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGCCTCGGCG
GCTTTACAGGCCATTCCCTTGGCGAAGAAGTCGGAGATTTCTACCCCACC
TCCACACTGGGTCGCTTCGTGGCCATCGTCGCTGCCTACACGGGCATCGT
CGGCATCGCCCTCCCCTCCACCATCATCGGCAAGAGCTTCATCGACGTCT
ACTTCCGGATGACGGCCACCACCGTGGGAT back to top
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