rna6273, rna6273 (mRNA) Nannochloropsis gaditana

Overview
Namerna6273
Unique Namerna6273
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1142
Alignment locationCM002468.1:147225..148204 -

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Properties
Property NameValue
Productgeneric methyltransferase
Orig transcript idgnl|cribi|Naga_102033g1.1497.mrna
Orig protein idgnl|cribi|Naga_102033g1.1497
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:147225..148204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102033g1gene6066Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6273rna6273-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24415.1cds6258Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6273 ID=rna6273|Name=rna6273|organism=Nannochloropsis gaditana|type=mRNA|length=1142bp
CCTCCCTCCCTCCATCCTTCCCTCCCTTTCTCAGGTGCCTACGACGCTGT
CCTCCTCGCGAACGTCTTGTGTCGCCTCCCAGACCCACGACTAGCCCTTG
AGATGATCGGAGGGAGGGAGGGAGGGAGGGAGGGCGTTTTGGCCCCCGGG
GGCTTGTTCATGCTGACCACGCCCTTCTCGTGGAAGGAATGCTTCACGCC
CAAGGAGAAGTGGCTGGGGGGCGCGGCGCCTGATGGGAAAGATTCGCATG
CCGAGTTGAAACGGCTCATGGGCGGTTTAGGATTCAAACTTTTGAAAGAG
CAGGAGATGCCTTTGATCATCCACCAGCACGCGAGGCTTTTCGAGCTCAT
CACTCCCATGGCAACAGTCTGGCAGAAAATGTGAGCCGCGAGGTGACCGT
TATCCGTTATCTTCGGCGGTTGCATGATTCAACTGTTTGAATTCCGACGA
TAAGAAGCAGATTGATCGATACAAGAAAAGATTAGGAATTGTTGCTCTTA
AAGGCAATTGATTGAAATGATGGAGGCCAAATTTGTGCTTGAGGGATATG
GCTGATGACAGCACAGACATGGCAAATCGAATCTAAATTATGTAATACTG
ACAAGGAGGAGTGAAGAGAAGCCAGGGCGTCGACAAGGGGAGACGAAGGA
AGATATTTAATTTGAAAATTAACGGATGAGCAAGGAGAAAGCGCCGGGCA
CACCAAGGAGAATGGGAAGAAAGAAGGGTGGAAGGAAGAGAGGCAGGAGA
GCAGGTCCATAAGAATGAGAGAGAGAAGGCAATGGATCGGGAAAGGGGTT
GAAAGAAGGGAAAAGCGAGCATCACGTAGGGGAAACGGTCAAGTCTCTAA
GGCGGGGAAGGGGGAGGTTGAGGTGATAGACTTTCCACCGATGCAATGGG
AGGGCTCCTTCCTCATCCGTGGATGATCGATGCAGGTTCAGGGCCTTATG
ATGAAAGTGGAAGGAGCGATAATTCAGGAGCAGTATTGGGAGGCAGGAAG
GGAGGATGCACTGACGTCAGTCATCATCCCTCCTCCAAGAACACCTCAGC
GATGGACGCGTTTCGAAAGAAGCAAGGAGCAAGCTGTGTTGAACAGCTTC
GTGCGCCCACAAGTGTTCTCCGTTAGCATGAACCTTCCATCG
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protein sequence of rna6273

>rna6273-protein ID=rna6273-protein|Name=rna6273|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGH
FESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPA
FPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLP
PFPPFL
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mRNA from alignment at CM002468.1:147225..148204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6273 ID=rna6273|Name=rna6273|organism=Nannochloropsis gaditana|type=mRNA|length=980bp|location=Sequence derived from alignment at CM002468.1:147225..148204- (Nannochloropsis gaditana)
ATGAAGGGAGAAAACGGTAAAAGGGCGTCCCGAGCTGTGCTGTTCAACCC CTTTTCTTCCCTTCGCCTTCTCCACCAGGCCCAATCCCCCTGCCTGGTCA GAACTGCCCCGGCCTCCTGCCTGACGGCTCCCTGACCTCCCTCCCCCTCC CCCGCCTCTCTCCCTCCTCCTCATCCGCGCGCCTCACGCGCGAGAGCTTG GCTGCCTACTTCGACAACACCTGGGCGCTTACTGAGGTCTTGTTCGCAGG GTTGCAGGGGCCGGAAGGCTTCTACCAGCCGCCCTACCACGGCTTGCGGC ATCCCCTGTGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGGGGCATGG AACTAGGGGAGATATTGGATGTAGGATGTAGTATGTTCGGCCCTTTTCAA GATGTTAGCTCACATTTTGGTCCCTCCCTTCCTCCCTCCCTCCCTCCCTC GCTTCCATCCAGCATTTTCTAGTAGGCCACCCAGCCGTCCTCTACGTAAA CAAGTTTCGCGTAGCGGGTCTCTTGAACGGCCCCATTAACGGCCATTTTG AATCGCTTTTTGAAACGGGCGTGGATGAGGTACGTTCGGGAAGCGAGTGA GAGGGGGGGTGAGAGCCGGAGAGGCCCTTCCATGTCTCAAGCCACCGTTT CCCCCCTCCCTCCCTCCCTCCCTGCTTTCTTTGCCCCCCTAGATGTCGTG GGACGACATGACCAAGAACTTCAAGGCCTGGCCGTCCGTATCGGAAGTTC GGGATTATCGCCGACAGGTCTACGAAGCCGTGCGCCACGTCATCCTCACC CACCCGGCCTTCCCCTCCCTGGAGAAAGAGGTAGGGAGGGAAGAGCGGAG GGAGGGAGGGAGGGAGGGACGGCGGGAGGGCGGGGAGGAGAGACAGACGA GGATTCTCCGGAGGCGACCGGACCGACATTTCCCTCCCCATGCCTCAACT CTTCTTCCCCCGTTCCCGCCCTTTCTTTAG
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Coding sequence (CDS) from alignment at CM002468.1:147225..148204-

>rna6273 ID=rna6273|Name=rna6273|organism=Nannochloropsis gaditana|type=CDS|length=1884bp|location=Sequence derived from alignment at CM002468.1:147225..148204- (Nannochloropsis gaditana)
ATGTCGTGGGACGACATGACCAAGAACTTCAAGGCCTGGCCGTCCGTATC
GGAAGTTCGGGATTATCGCCGACAGGTCTACGAAGCCGTGCGCCACGTCA
TCCTCACCCACCCGGCCTTCCCCTCCCTGGAGAAAGAGGTAGGGAGGGAA
GAGCGGAGGGAGGGAGGGAGGGAGGGACGGCGGGAGGGCGGGGAGGAGAG
ACAGACGAGGATTCTCCGGAGGCGACCGGACCGACATTTCCCTCCCCATG
CCTCAACTCTTCTTCCCCCGTTCCCGCCCTTTCTTTAGCATTTTCTAGTA
GGCCACCCAGCCGTCCTCTACGTAAACAAGTTTCGCGTAGCGGGTCTCTT
GAACGGCCCCATTAACGGCCATTTTGAATCGCTTTTTGAAACGGGCGTGG
ATGAGGGGCCGGAAGGCTTCTACCAGCCGCCCTACCACGGCTTGCGGCAT
CCCCTATGAAGGGAGAAAACGATGTCGTGGGACGACATGACCAAGAACTT
CAAGGCCTGGCCGTCCGTATCGGAAGTTCGGGATTATCGCCGACAGGTCT
ACGAAGCCGTGCGCCACGTCATCCTCACCCACCCGGCCTTCCCCTCCCTG
GAGAAAGAGGTAGGGAGGGAAGAGCGGAGGGAGGGAGGGAGGGAGGGACG
GCGGGAGGGCGGGGAGGAGAGACAGACGAGGATTCTCCGGAGGCGACCGG
ACCGACATTTCCCTCCCCATGCCTCAACTCTTCTTCCCCCGTTCCCGCCC
TTTCTTTAGCATTTTCTAGTAGGCCACCCAGCCGTCCTCTACGTAAACAA
GTTTCGCGTAGCGGGTCTCTTGAACGGCCCCATTAACGGCCATTTTGAAT
CGCTTTTTGAAACGGGCGTGGATGAGGGGCCGGAAGGCTTCTACCAGCCG
CCCTACCACGGCTTGCGGCATCCCCTATGAAGGGAGAAAACGATGTCGTG
GGACGACATGACCAAGAACTTCAAGGCCTGGCCGTCCGTATCGGAAGTTC
GGGATTATCGCCGACAGGTCTACGAAGCCGTGCGCCACGTCATCCTCACC
CACCCGGCCTTCCCCTCCCTGGAGAAAGAGGTAGGGAGGGAAGAGCGGAG
GGAGGGAGGGAGGGAGGGACGGCGGGAGGGCGGGGAGGAGAGACAGACGA
GGATTCTCCGGAGGCGACCGGACCGACATTTCCCTCCCCATGCCTCAACT
CTTCTTCCCCCGTTCCCGCCCTTTCTTTAGCATTTTCTAGTAGGCCACCC
AGCCGTCCTCTACGTAAACAAGTTTCGCGTAGCGGGTCTCTTGAACGGCC
CCATTAACGGCCATTTTGAATCGCTTTTTGAAACGGGCGTGGATGAGGGG
CCGGAAGGCTTCTACCAGCCGCCCTACCACGGCTTGCGGCATCCCCTATG
AAGGGAGAAAACGATGTCGTGGGACGACATGACCAAGAACTTCAAGGCCT
GGCCGTCCGTATCGGAAGTTCGGGATTATCGCCGACAGGTCTACGAAGCC
GTGCGCCACGTCATCCTCACCCACCCGGCCTTCCCCTCCCTGGAGAAAGA
GGTAGGGAGGGAAGAGCGGAGGGAGGGAGGGAGGGAGGGACGGCGGGAGG
GCGGGGAGGAGAGACAGACGAGGATTCTCCGGAGGCGACCGGACCGACAT
TTCCCTCCCCATGCCTCAACTCTTCTTCCCCCGTTCCCGCCCTTTCTTTA
GCATTTTCTAGTAGGCCACCCAGCCGTCCTCTACGTAAACAAGTTTCGCG
TAGCGGGTCTCTTGAACGGCCCCATTAACGGCCATTTTGAATCGCTTTTT
GAAACGGGCGTGGATGAGGGGCCGGAAGGCTTCTACCAGCCGCCCTACCA
CGGCTTGCGGCATCCCCTATGAAGGGAGAAAACG
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Synonyms
Publications