EWM24415.1, cds6258 (CDS) Nannochloropsis gaditana

Overview
NameEWM24415.1
Unique Namecds6258
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:148189..148204 -
Alignment locationCM002468.1:147898..147947 -
Alignment locationCM002468.1:147626..147742 -
Alignment locationCM002468.1:147225..147512 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24415.1
Productgeneric methyltransferase
Orig transcript idgnl|cribi|Naga_102033g1.1497.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:148189..148204 -
CM002468.1supercontigCM002468.1:147898..147947 -
CM002468.1supercontigCM002468.1:147626..147742 -
CM002468.1supercontigCM002468.1:147225..147512 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|585105839|gb|EWM24415.1| (generic methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 315.464 bits (807), Expect = 5.781e-109
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL 156
            MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL
Sbjct:    1 MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL 156          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1179605942|ref|WP_083374139.1| (hypothetical protein [Moorea producens])

HSP 1 Score: 111.309 bits (277), Expect = 1.607e-25
Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
            F   HPA LY+NK R+AG+++  IN +FE LFETGVDEMSWDDM+KN   WPS+ EV +YRR+VY+ V  VI THP F S
Sbjct:  103 FYYCHPATLYINKLRLAGIIDLGINSYFEQLFETGVDEMSWDDMSKNEMEWPSIKEVNEYRRKVYQIVLEVIATHPDFAS 182          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1092226394|gb|AOY84736.1| (hypothetical protein BJP36_17695 [Moorea producens JHB])

HSP 1 Score: 111.309 bits (277), Expect = 1.651e-25
Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
            F   HPA LY+NK R+AG+++  IN +FE LFETGVDEMSWDDM+KN   WPS+ EV +YRR+VY+ V  VI THP F S
Sbjct:   55 FYYCHPATLYINKLRLAGIIDLGINSYFEQLFETGVDEMSWDDMSKNEMEWPSIKEVNEYRRKVYQIVLEVIATHPDFAS 134          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|813226569|ref|XP_012212361.1| (hypothetical protein SPRG_17611, partial [Saprolegnia parasitica CBS 223.65] >gi|641521140|gb|KDO16931.1| hypothetical protein SPRG_17611, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 110.923 bits (276), Expect = 2.126e-25
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHP 99
            F  GHP   YVNKFR+AGLL GP+N  FE LFE GVDEM WDDM+KN K WPS+ E++ YRRQVY  V+ ++L+HP
Sbjct:  157 FYYGHPTCFYVNKFRLAGLLQGPVNPAFEDLFEVGVDEMRWDDMSKNEKEWPSLHEMQAYRRQVYGLVKSIVLSHP 232          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|302842843|ref|XP_002952964.1| (hypothetical protein VOLCADRAFT_105776 [Volvox carteri f. nagariensis] >gi|300261675|gb|EFJ45886.1| hypothetical protein VOLCADRAFT_105776 [Volvox carteri f. nagariensis])

HSP 1 Score: 110.923 bits (276), Expect = 2.690e-25
Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREE 112
            F  GHPAVLY+NKFRVAGLL   IN +FE LFETGVDEMSWDD+++    WP V EV +YR+Q Y  +R +IL HPA    + EVG ++
Sbjct:  120 FYYGHPAVLYINKFRVAGLLEKGINQYFEQLFETGVDEMSWDDLSRGRDDWPPVREVHEYRKQSYAVIRDIILNHPALD--KGEVGWDD 206          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|159472416|ref|XP_001694347.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158277010|gb|EDP02780.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 109.768 bits (273), Expect = 6.490e-25
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEK-EVGREE 112
            F  GHPAVLY+NKFRV GLL   +N  FE LFETGVDEMSWDD+++    WP V EV +YRR+ YE VR VIL HPA   L+K E+G ++
Sbjct:   42 FYYGHPAVLYINKFRVGGLLTDGLNQFFEQLFETGVDEMSWDDLSRGRDDWPPVREVTEYRRKAYEVVRDVILNHPA---LDKPEIGWDD 128          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|880911163|ref|WP_048673544.1| (hypothetical protein [Candidatus Competibacter denitrificans])

HSP 1 Score: 109.768 bits (273), Expect = 7.002e-25
Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
            F  GHP VLY+NK R+AGL+  P+N +FE LFETGVDEM WDDM+KN   WPS+ EV  YR+QVY  VR VI THP   S
Sbjct:  109 FYYGHPPVLYINKLRIAGLIEKPLNPYFEQLFETGVDEMRWDDMSKNEMLWPSIQEVHAYRQQVYRTVRGVIETHPDLAS 188          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|590103713|emb|CDI02980.1| (conserved hypothetical protein [Candidatus Competibacter denitrificans Run_A_D11])

HSP 1 Score: 109.383 bits (272), Expect = 7.140e-25
Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
            F  GHP VLY+NK R+AGL+  P+N +FE LFETGVDEM WDDM+KN   WPS+ EV  YR+QVY  VR VI THP   S
Sbjct:  110 FYYGHPPVLYINKLRIAGLIEKPLNPYFEQLFETGVDEMRWDDMSKNEMLWPSIQEVHAYRQQVYRTVRGVIETHPDLAS 189          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1160388879|ref|WP_079433228.1| (hypothetical protein [Zoogloea sp. LCSB751])

HSP 1 Score: 109.383 bits (272), Expect = 7.484e-25
Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAF 101
            F  GHPAVLYVNK RVAGL++ PIN +FE +FETGVDEM WDDM+KN   WP  SEV  YR+QVY  VR +I THP  
Sbjct:  109 FYYGHPAVLYVNKLRVAGLIDTPINPYFERIFETGVDEMRWDDMSKNEMRWPGFSEVHTYRQQVYLTVRRLIETHPGL 186          
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1004147490|gb|KXZ55463.1| (hypothetical protein GPECTOR_2g1012 [Gonium pectorale])

HSP 1 Score: 108.997 bits (271), Expect = 1.152e-24
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0
Query:   24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAF 101
            F  GHPAVLY+NKFRVAGLL   IN +FE LFETGVDEMSWDD+++    WP V EV  YR++ Y+ VR VIL HPA 
Sbjct:  119 FYYGHPAVLYINKFRVAGLLEDGINQYFEQLFETGVDEMSWDDLSRGRDDWPPVREVHAYRQKAYQVVRGVILNHPAL 196          
The following BLAST results are available for this feature:
BLAST of EWM24415.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105839|gb|EWM24415.1|5.781e-109100.00generic methyltransferase [Nannochloropsis gaditan... [more]
gi|1179605942|ref|WP_083374139.1|1.607e-2561.25hypothetical protein [Moorea producens][more]
gi|1092226394|gb|AOY84736.1|1.651e-2561.25hypothetical protein BJP36_17695 [Moorea producens... [more]
gi|813226569|ref|XP_012212361.1|2.126e-2563.16hypothetical protein SPRG_17611, partial [Saproleg... [more]
gi|302842843|ref|XP_002952964.1|2.690e-2558.43hypothetical protein VOLCADRAFT_105776 [Volvox car... [more]
gi|159472416|ref|XP_001694347.1|6.490e-2560.00predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|880911163|ref|WP_048673544.1|7.002e-2562.50hypothetical protein [Candidatus Competibacter den... [more]
gi|590103713|emb|CDI02980.1|7.140e-2562.50conserved hypothetical protein [Candidatus Competi... [more]
gi|1160388879|ref|WP_079433228.1|7.484e-2565.38hypothetical protein [Zoogloea sp. LCSB751][more]
gi|1004147490|gb|KXZ55463.1|1.152e-2464.10hypothetical protein GPECTOR_2g1012 [Gonium pector... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6273rna6273Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications