EWM24415.1, cds6258 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|585105839|gb|EWM24415.1| (generic methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 315.464 bits (807), Expect = 5.781e-109 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 1 MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL 156
MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL
Sbjct: 1 MKGENGAGRLLPAALPRLAASPHFLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREERREGGREGRREGGEERQTRILRRRPDRHFPPHASTLLPPFPPFL 156
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1179605942|ref|WP_083374139.1| (hypothetical protein [Moorea producens]) HSP 1 Score: 111.309 bits (277), Expect = 1.607e-25 Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
F HPA LY+NK R+AG+++ IN +FE LFETGVDEMSWDDM+KN WPS+ EV +YRR+VY+ V VI THP F S
Sbjct: 103 FYYCHPATLYINKLRLAGIIDLGINSYFEQLFETGVDEMSWDDMSKNEMEWPSIKEVNEYRRKVYQIVLEVIATHPDFAS 182
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1092226394|gb|AOY84736.1| (hypothetical protein BJP36_17695 [Moorea producens JHB]) HSP 1 Score: 111.309 bits (277), Expect = 1.651e-25 Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
F HPA LY+NK R+AG+++ IN +FE LFETGVDEMSWDDM+KN WPS+ EV +YRR+VY+ V VI THP F S
Sbjct: 55 FYYCHPATLYINKLRLAGIIDLGINSYFEQLFETGVDEMSWDDMSKNEMEWPSIKEVNEYRRKVYQIVLEVIATHPDFAS 134
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|813226569|ref|XP_012212361.1| (hypothetical protein SPRG_17611, partial [Saprolegnia parasitica CBS 223.65] >gi|641521140|gb|KDO16931.1| hypothetical protein SPRG_17611, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.923 bits (276), Expect = 2.126e-25 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHP 99
F GHP YVNKFR+AGLL GP+N FE LFE GVDEM WDDM+KN K WPS+ E++ YRRQVY V+ ++L+HP
Sbjct: 157 FYYGHPTCFYVNKFRLAGLLQGPVNPAFEDLFEVGVDEMRWDDMSKNEKEWPSLHEMQAYRRQVYGLVKSIVLSHP 232
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|302842843|ref|XP_002952964.1| (hypothetical protein VOLCADRAFT_105776 [Volvox carteri f. nagariensis] >gi|300261675|gb|EFJ45886.1| hypothetical protein VOLCADRAFT_105776 [Volvox carteri f. nagariensis]) HSP 1 Score: 110.923 bits (276), Expect = 2.690e-25 Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEKEVGREE 112
F GHPAVLY+NKFRVAGLL IN +FE LFETGVDEMSWDD+++ WP V EV +YR+Q Y +R +IL HPA + EVG ++
Sbjct: 120 FYYGHPAVLYINKFRVAGLLEKGINQYFEQLFETGVDEMSWDDLSRGRDDWPPVREVHEYRKQSYAVIRDIILNHPALD--KGEVGWDD 206
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|159472416|ref|XP_001694347.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158277010|gb|EDP02780.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 109.768 bits (273), Expect = 6.490e-25 Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPSLEK-EVGREE 112
F GHPAVLY+NKFRV GLL +N FE LFETGVDEMSWDD+++ WP V EV +YRR+ YE VR VIL HPA L+K E+G ++
Sbjct: 42 FYYGHPAVLYINKFRVGGLLTDGLNQFFEQLFETGVDEMSWDDLSRGRDDWPPVREVTEYRRKAYEVVRDVILNHPA---LDKPEIGWDD 128
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|880911163|ref|WP_048673544.1| (hypothetical protein [Candidatus Competibacter denitrificans]) HSP 1 Score: 109.768 bits (273), Expect = 7.002e-25 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
F GHP VLY+NK R+AGL+ P+N +FE LFETGVDEM WDDM+KN WPS+ EV YR+QVY VR VI THP S
Sbjct: 109 FYYGHPPVLYINKLRIAGLIEKPLNPYFEQLFETGVDEMRWDDMSKNEMLWPSIQEVHAYRQQVYRTVRGVIETHPDLAS 188
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|590103713|emb|CDI02980.1| (conserved hypothetical protein [Candidatus Competibacter denitrificans Run_A_D11]) HSP 1 Score: 109.383 bits (272), Expect = 7.140e-25 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAFPS 103
F GHP VLY+NK R+AGL+ P+N +FE LFETGVDEM WDDM+KN WPS+ EV YR+QVY VR VI THP S
Sbjct: 110 FYYGHPPVLYINKLRIAGLIEKPLNPYFEQLFETGVDEMRWDDMSKNEMLWPSIQEVHAYRQQVYRTVRGVIETHPDLAS 189
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1160388879|ref|WP_079433228.1| (hypothetical protein [Zoogloea sp. LCSB751]) HSP 1 Score: 109.383 bits (272), Expect = 7.484e-25 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAF 101
F GHPAVLYVNK RVAGL++ PIN +FE +FETGVDEM WDDM+KN WP SEV YR+QVY VR +I THP
Sbjct: 109 FYYGHPAVLYVNKLRVAGLIDTPINPYFERIFETGVDEMRWDDMSKNEMRWPGFSEVHTYRQQVYLTVRRLIETHPGL 186
BLAST of EWM24415.1 vs. NCBI_GenBank
Match: gi|1004147490|gb|KXZ55463.1| (hypothetical protein GPECTOR_2g1012 [Gonium pectorale]) HSP 1 Score: 108.997 bits (271), Expect = 1.152e-24 Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0
Query: 24 FLVGHPAVLYVNKFRVAGLLNGPINGHFESLFETGVDEMSWDDMTKNFKAWPSVSEVRDYRRQVYEAVRHVILTHPAF 101
F GHPAVLY+NKFRVAGLL IN +FE LFETGVDEMSWDD+++ WP V EV YR++ Y+ VR VIL HPA
Sbjct: 119 FYYGHPAVLYINKFRVAGLLEDGINQYFEQLFETGVDEMSWDDLSRGRDDWPPVREVHAYRQKAYQVVRGVILNHPAL 196 The following BLAST results are available for this feature:
BLAST of EWM24415.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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