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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101033g1.4765.mrna |
| Orig protein id | gnl|cribi|Naga_101033g1.4765 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:91778..93798 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6252 ID=rna6252|Name=rna6252|organism=Nannochloropsis gaditana|type=mRNA|length=876bp
AGAAAGGGGCCGACTAGACACTTGAAAAGGTTCGCGGAGTGTACGACTGA
GAAATTCGAATTTTGTGGGCCAGCTAAACACACAATCATTGCCTATCACA
CAATCAGGTCGCGAGCACAATTTTGGCATGATGCCTGTTTAACAGATGAG
GACATCCCGAAAATAGGATGACTTTGACGTTGTAGGCTGTGCAGGCATCA
AAAATGGTCAAAGAAACCCAGGATTTCGGGCCACCAGGAGGAAGAACGAT
GCGACCGCAGGTGTTGGCGAGCCACGCAAAGCCAGCTTGTGGCATAAACG
ATAATCTCAACCCCGTCTTGGACCGTGTAAGTGAAACGCGCCTTACAGAG
TTACCAAGTGGTCACATGCATGTGGGGAGGGATTTTACAAGGAGATTACA
GGCATGATTAAGTCACAAAGCGCGTACGCACCACGGACACATGTGCCGAT
CTTGTACCGGGGCAGCGGGGGGGTAAAGCGAAGTATTGCCTTCCTTTTCA
TGCCTTTTAATGCCCGCGGTTTTTTTACCGCCAAGTACACACACGCCAAA
GTACATTCCATTAAACGTACTGCCTCGATGGCATGTTTTGGTTGCGGACA
GTGGAAGTGCATTTTTAGCACGCCGCACCTACTCTTAACGGCCCTCCTCT
CGTGTCGCCGATGGACTTGGGCCATAAGTTCTACACGCCTGTCAAAGAGA
AATCCATCTGATTGGATATATGAGGAGAGAGGTTACCCTGAGTCCTGCAA
AGATACCTTATATGCTTAAAAGATTGTATTCAGGGTCAGAACAGGGGGAG
GGCCTTCACGTGTGCCTATCGACAAGCACACTTGGGGCTGAGCACACTTG
ATTGTAGCAAAAGAAATACCTTCACC back to topprotein sequence of rna6252 >rna6252-protein ID=rna6252-protein|Name=rna6252|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp
MIVCLAGPQNSNFSVVHSANLFKCLVGPFLPPMEVVPSRRGTAQIAVEIE
EEEEAICVQKALGASLSLLHVMRQKQKPSRRPEAEGWRDHSVRYVSPSSM
PESSSPSHLDATVLSRSAGFQALRVCLEEILTLPMALEREREGLVATERA
FVDGMGPFAAPEGVNKSGNDTKPDVPQPFSLAPSLFEAASTASPTPSESS
HSGMDLSPPPASTCKRRRRMWSYHPEAGADGAQEKAGKREGGRGGRREGL
LRRSLSAGSLHVLDTEEVETRNVEEEGREEVKEELSRPPPHCALPALPKS
HAQTHTASCLTPSPPPPPSLPAIPSPPRPTCSASPSTSSSSGTLLPPAFV
PALPPSLFPPPSLRDPLPARPAVPDHPLACLQGLEGPRPRTSLLAPHPQS
GTSRG back to topmRNA from alignment at CM002468.1:91778..93798+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6252 ID=rna6252|Name=rna6252|organism=Nannochloropsis gaditana|type=mRNA|length=2021bp|location=Sequence derived from alignment at CM002468.1:91778..93798+ (Nannochloropsis gaditana)
TGCCACAAGCTGGCTTTGCGTGGCTCGCCAACACCTGCGGTCGCatcgtt
cttcctcctggtggcCCGAAATCCTGGGTTTCTTTGACCATTTTTGATGC
CTGCACAGCCTACAACGTCAAAGTCATCCTATTTTCGGGATGTCCTCATC
TGTTAAACAGGCATCATGCCAAAATTGTGCTCGCGACCTGATTGTGTGAT
AGGCAATGATTGTGTGTTTAGCTGGCCCACAAAATTCGAATTTCTCAGTC
GTACACTCCGCGAACCTTTTCAAGTGTCTAGTCGGCCCCTTTCTGCCTCC
TATGGAAGTGGTGCCAAGCCGTCGGGGCACAGCGCAAATCGCAGTGGaaa
tcgaggaagaggaggaagcaattTGCGTGCAAAAAGCGCTTGGGGCCTCC
TTATCCTTGCTCCATGTCATGCGACAGAAGCAGAAGCCCAGCCGTAggcc
ggaggcggagggatggagggatcATTCGGTGCGATacgtttccccttcct
cgatgcCAGAGTCTTCCTCACCGAGCCACCTCGACGCTACCGTGTTGTCC
CGCTCGGCTGGTTTTCAGGCCTTGCGGGTGTGCTTGGAAGAGATTCTGAC
CCTTCCCATGGCCCTGGAGCGGGAGCGAGAGGGCCTGGTCGCGACGGAAC
GGGCGTTTGTAGACGGCATGGGGCCGTTTGCAGCGCCCGAGGGAGTAAAC
AAAAGCGGCAACGACACCAAAGTGAGTCTGTGGGACGATGAAGATTCCCT
GTAgacgtccttttcctcttcccatgccctccctgctccatctctccctt
tcgcctcctcacCATGCCCCTactgctctttttctccaaGCTTCGCTATC
CTTACCCAGACTCTCCATATATGATATCTGTGTTTCATAttctgcctcct
cgccgagccccttccctcccccactttcTTGCCAGACCACATaacccttt
cccctcccctttccctccctcggtgcccgccctccctccctccttcaagc
ccgACGTCCCCCaacccttctccctcgccccctccctcttcgaggCCGCG
TCTACCGCCAGCCCCACCCCCTCGGAGAGCAGCCACAGCGGCATGgatct
ctcccccccccccgcctcgacGTGCAAGAGGCGCCGGCGTATGTGGTCGT
ACCATCcagaggcaggggcggacggggcacaggagaaggcgggaaagagg
gagggagggagggggggaaggagggagggtctcTTGCGAAGGTCCCTCAG
CGCGGGTTCTCTGCACGTCTTGGAcacagaggaggtggagaccaggaacg
tggaggaggaaggaagggaggaggtgaaagaggagctctcgcgccccccc
ccacactgcgccctccccgccctccccaagAGCCACGCCCAGACCCATAC
TGCTTCCTGcctcactccttctcctccccctcctccctccctgcccgcga
TACCTTCACCTCCACGACCGACCTGCTCCGCCTCGccgtccacttcctcc
tcgtcggggacgctccttccccccgccttcgtccccgccctccctccctc
cctcttcccccccccctccctccgagaCCCTCTCCCGGCACGACCGGCGG
TGCCTGACCACCCTCTCGCTTGTTTGCAAGGACTGGAAGGACCTCGCCCG
AGAACCTCGCTTTTGGCGCCCCATCCTCAAAGCGGTACTTCCCGTGGCTG
atgcggaggcggaagaacAGGCACCAtggcggcggtgggaggaagggaag
ggagggaaaggaggacggaggggaagaggagcagaaCACGACCCACCCCA
GGCTCGCACCAgggcgtcctccctccctccctccccctccccctcccctt
tcgccctcctccgcgagcAGGGCCGTGCTATCCTCCagcgccagctcctc
ctggaGGGCAGCCTGCcacccccgtcctccttgctcctccagtTCGACGT
CTTGGACATGATGGACggtctccgccttctctcctgcTCGGGGCCCTTTG
TGGTTGTGCCCGTCGAAGGCA back to topCoding sequence (CDS) from alignment at CM002468.1:91778..93798+ >rna6252 ID=rna6252|Name=rna6252|organism=Nannochloropsis gaditana|type=CDS|length=2436bp|location=Sequence derived from alignment at CM002468.1:91778..93798+ (Nannochloropsis gaditana)
ATGATTGTGTGTTTAGCTGGCCCACAAAATTCGAATTTCTCAGTCGTACA
CTCCGCGAACCTTTTCAAGTGTCTAGTCGGCCCCTTTCTGCCTCCTATGG
AAGTGGTGCCAAGCCGTCGGGGCACAGCGCAAATCGCAGTGGaaatcgag
gaagaggaggaagcaattTGCGTGCAAAAAGCGCTTGGGGCCTCCTTATC
CTTGCTCCATGTCATGCGACAGAAGCAGAAGCCCAGCCGTAggccggagg
cggagggatggagggatcATTCGGTGCGATacgtttccccttcctcgatg
cCAGAGTCTTCCTCACCGAGCCACCTCGACGCTACCGTGTTGTCCCGCTC
GGCTGGTTTTCAGGCCTTGCGGGTGTGCTTGGAAGAGATTCTGACCCTTC
CCATGGCCCTGGAGCGGGAGCGAGAGGGCCTGGTCGCGACGGAACGGGCG
TTTGTAGACGGCATGGGGCCGTTTGCAGCGCCCGAGGGAGTAAACAAAAG
CGGCAACGACACCAAAcccgACGTCCCCCaacccttctccctcgccccct
ccctcttcgaggCCGCGTCTACCGCCAGCCCCACCCCCTCGGAGAGCAGC
CACAGCGGCATGgatctctcccccccccccgcctcgacGTGCAAGAGGCG
CCGGCGTATGTGGTCGTACCATCcagaggcaggggcggacggggcacagg
agaaggcgggaaagagggagggagggagggggggaaggagggagggtctc
TTGCGAAGGTCCCTCAGCGCGGGTTCTCTGCACGTCTTGGAcacagagga
ggtggagaccaggaacgtggaggaggaaggaagggaggaggtgaaagagg
agctctcgcgcccccccccacactgcgccctccccgccctccccaagAGC
CACGCCCAGACCCATACTGCTTCCTGcctcactccttctcctccccctcc
tccctccctgcccgcgaTACCTTCACCTCCACGACCGACCTGCTCCGCCT
CGccgtccacttcctcctcgtcggggacgctccttccccccgccttcgtc
cccgccctccctccctccctcttcccccccccctccctccgagaCCCTCT
CCCGGCACGACCGGCGGTGCCTGACCACCCTCTCGCTTGTTTGCAAGGAC
TGGAAGGACCTCGCCCGAGAACCTCGCTTTTGGCGCCCCATCCTCAAAGC
GGTACTTCCCGTGGCTGaATGATTGTGTGTTTAGCTGGCCCACAAAATTC
GAATTTCTCAGTCGTACACTCCGCGAACCTTTTCAAGTGTCTAGTCGGCC
CCTTTCTGCCTCCTATGGAAGTGGTGCCAAGCCGTCGGGGCACAGCGCAA
ATCGCAGTGGaaatcgaggaagaggaggaagcaattTGCGTGCAAAAAGC
GCTTGGGGCCTCCTTATCCTTGCTCCATGTCATGCGACAGAAGCAGAAGC
CCAGCCGTAggccggaggcggagggatggagggatcATTCGGTGCGATac
gtttccccttcctcgatgcCAGAGTCTTCCTCACCGAGCCACCTCGACGC
TACCGTGTTGTCCCGCTCGGCTGGTTTTCAGGCCTTGCGGGTGTGCTTGG
AAGAGATTCTGACCCTTCCCATGGCCCTGGAGCGGGAGCGAGAGGGCCTG
GTCGCGACGGAACGGGCGTTTGTAGACGGCATGGGGCCGTTTGCAGCGCC
CGAGGGAGTAAACAAAAGCGGCAACGACACCAAAcccgACGTCCCCCaac
ccttctccctcgccccctccctcttcgaggCCGCGTCTACCGCCAGCCCC
ACCCCCTCGGAGAGCAGCCACAGCGGCATGgatctctcccccccccccgc
ctcgacGTGCAAGAGGCGCCGGCGTATGTGGTCGTACCATCcagaggcag
gggcggacggggcacaggagaaggcgggaaagagggagggagggaggggg
ggaaggagggagggtctcTTGCGAAGGTCCCTCAGCGCGGGTTCTCTGCA
CGTCTTGGAcacagaggaggtggagaccaggaacgtggaggaggaaggaa
gggaggaggtgaaagaggagctctcgcgcccccccccacactgcgccctc
cccgccctccccaagAGCCACGCCCAGACCCATACTGCTTCCTGcctcac
tccttctcctccccctcctccctccctgcccgcgaTACCTTCACCTCCAC
GACCGACCTGCTCCGCCTCGccgtccacttcctcctcgtcggggacgctc
cttccccccgccttcgtccccgccctccctccctccctcttccccccccc
ctccctccgagaCCCTCTCCCGGCACGACCGGCGGTGCCTGACCACCCTC
TCGCTTGTTTGCAAGGACTGGAAGGACCTCGCCCGAGAACCTCGCTTTTG
GCGCCCCATCCTCAAAGCGGTACTTCCCGTGGCTGa back to top
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