rna6244, rna6244 (mRNA) Nannochloropsis gaditana

Overview
Namerna6244
Unique Namerna6244
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length687
Alignment locationCM002468.1:66523..68221 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100820g1.5792.mrna
Orig protein idgnl|cribi|Naga_100820g1.5792
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:66523..68221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100820g1gene6035Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6244rna6244-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24445.1cds6229Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6244 ID=rna6244|Name=rna6244|organism=Nannochloropsis gaditana|type=mRNA|length=687bp
ATGTCCACTCGGAGCGGCATGCTGGTGTTCGGGAGCGTCGTGCTCGCAGT
GGCTGGCAATGTCTTGGTGGCCCGCCGATACGGGAGGCGAGTCATGAGCT
GGGCGGTACCTACGGAGAACAAGCACAGTAGTTTTGTGAAAAGGGAAATG
TACAAAGAGTACTGGGACCCGGCGTTTAAACGGGCGCGATGGGAATCATA
CTTCTCCGCCGCAGCCGAGGAGGAAAGGCAACAGGCAGAAAGGATCTACG
CATGGATGATGGAGGAACGAGAACGAGAGGCGTTGAGGGAGAAGCTTCAC
CGTTTCTACCACGAAAAAGTGGACGAGCAGACGTGGCAAGGCTTTTCTGC
CGAGGATTTCTTCGGGGCTCAATTCGGAGAAGAGGGCCGTAAGGGGTTCC
GACGGCGAGCAGGGGCACGGCGCCCACCCCCACCTTCCACTTTCTCCCAA
CAGCGGGTTGAAGCCCTGAAGACGCTGGAGCTCTCAAGCAACCCTTTGGA
GGAGTTGAAGGAGGAGACGGTGAAAGAGGCTTTCCGCAGGAAGGCCCTGG
CATGCCATCCCGATAGAGTATCCCCTGAAGAACGCGCCAAAAGCAGCCAG
GAGTTCAAGAAGGTGAACGCGGCTTTCACTTTCTTGATGGAAGAGGTGGT
AGAAGGGAGAAAGAGGGAGGAGGAGGATGACTGGTAG
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protein sequence of rna6244

>rna6244-protein ID=rna6244-protein|Name=rna6244|organism=Nannochloropsis gaditana|type=polypeptide|length=193bp
MPQVWYEGKIIEREDDVVKVHFHKWPSKYDEWIPLRAKRFAPHKCFTAVT
KDFIKRKRAERRDGEEDEEEDEEEDEAQKQQEEEEESEEEPGRRRKRRCV
KRKEEAKEEFMRAKQERREKKRARESSKKNDEGRAEERGECGWEGRREGG
KEGGLASDGNGWGTSNGDGSREEDKRLDKKQGEDSVGVDDDAE
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mRNA from alignment at CM002468.1:66523..68221-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6244 ID=rna6244|Name=rna6244|organism=Nannochloropsis gaditana|type=mRNA|length=1699bp|location=Sequence derived from alignment at CM002468.1:66523..68221- (Nannochloropsis gaditana)
GATGCCACAGGTGTGGTACGAAGGCAAGATCATCGAACGGGAGGATGATG
TCGTCAAGGTACGTGGCGCTTTTCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCTTCCCTCCCTTTCTCCCTCTCACGTGCTCTCTGGTTCTCCCCGCTCTC
TCCAGGTGCATTTCCACAAATGGCCAAGCAAGTACGACGAGTGGATCCCT
CTCCGAGCCAAACGCTTCGCGCCCCATAAATGCTTCACTGCCGTCACAAA
GGTAGCCTCTCGCCCTCTCTTGTCCTCTTTCCAGTCCTGCTTTCTCGGAT
CTAGTGCCGCTTTTACCCCTCCTTCGTCTTGCTATCTCGGTCGGAGGATG
ACGTATCGCCTCCTAGGCAGCTTATGTCTCGTCTCTCTTCTGCCAATTCG
CTTTCTCGTTCAATCTGTTCCCTCCTTCCAGTGTTTTCGCGGATGGGATC
CGTCCATTTTCCTGTGTTGTCTCCGTTTCTCTCCGGCTCGGTAAATGCAG
CCCTTCCAGAGGGCAACACTTTGTGCCCTCCGTCCTTTTTCCTCCCTCTT
TGTCAAAATGACTTAAATCTTGACCCGAACCCTATCCCCTCCCCAAATTT
CTAGGACTTCATTAAACGGAAGCGCGCGGAGAGGAGAGACGGGGAGGAAG
ACGAGGAGGAGGACGAGGAGGAGGACGAGGCACAGAAACAGCAAGAGGAG
GAGGAGGAAAGGTGCGTCTGTGGGAAGGAAGTGGACAAGTGGAGCGCGTA
CAACCCTAGGGGGAAAGAATAGCAGTGCACTCATGATCTGCTTCCTTTTC
CTCCCTCCCTGCATCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCTTCCCT
TTCTCCCTACGGTACAGTGAAGAGGAGCCGGGTAGACGCCGGAAGCGCCG
GTGTGTGAAACGGAAGGAAGAAGCAAAGGAGGAGTTTATGAGAGCCAAGC
AGGAACGCCGTGAGAAAAAGAGGGCGAGGGAATCATCGAAGAAAAATGAT
GAGGGACGGGCGGAAGAGCGTGGGGAGTGTGGGTGGGAGGGCAGGAGGGA
GGGCGGGAAGGAGGGAGGGCTTGCGTCGGACGGCAATGGTTGGGGGACGA
GTAACGGAGACGGGAGTAGGGAGGAGGACAAAAGACTGGACAAGAAGCAG
GGAGAGGACTCGGTGGGAGTGGACGACGATGCCGAGTGAGCATCTGGCAT
GTCCAGAGAGGATGGATGAGGGAGGTCGTGCTGTTCTAAGGAAGGACGTA
AGAGGGAAGAAAATTGGTAATATGGTGCTGGTGGTGAGATGATGATGGTG
ACAATAATTGGTATTGCTCCATTTTTATGATTAAAATGGCGTGGACTGCG
ACGTATCCGAGACTGATTGTTGTGCGCGATGGATGTTGTGATATTTTGAA
GGGTACTGACGCCTTTCTGAGGGCCCTTCTCGAATGTATCGGTTTGAAAA
GTAACCAAGAGAGGGTGCGTGGACCAGGCACTTGAAGCGAGAAGGAAAAA
AGGGCAGGGTTGGATGGACGCGGAAGAGCCCCCGAAAGAAAATCCATAGC
GAGTAAAAGCAAGTCGTGTCAACATACAATAAAGCCATGCATGTGCAGAA
GGACGATAGGGACCAGTACGTCTCCAATCCAGCCCCTGACTTGTAAAGTC
AAGCCACACTGCCACTCAAAGTCTAAACTGAAGCAACCGTATCAACAGG
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Coding sequence (CDS) from alignment at CM002468.1:66523..68221-

>rna6244 ID=rna6244|Name=rna6244|organism=Nannochloropsis gaditana|type=CDS|length=2328bp|location=Sequence derived from alignment at CM002468.1:66523..68221- (Nannochloropsis gaditana)
TGAAGAGGAGCCGGGTAGACGCCGGAAGCGCCGGTGTGTGAAACGGAAGG
AAGAAGCAAAGGAGGAGTTTATGAGAGCCAAGCAGGAACGCCGTGAGAAA
AAGAGGGCGAGGGAATCATCGAAGAAAAATGATGAGGGACGGGCGGAAGA
GCGTGGGGAGTGTGGGTGGGAGGGCAGGAGGGAGGGCGGGAAGGAGGGAG
GGCTTGCGTCGGACGGCAATGGTTGGGGGACGAGTAACGGAGACGGGAGT
AGGGAGGAGGACAAAAGACTGGACAAGAAGCAGGGAGAGGACTCGGTGGG
AGTGGACGACGATGCCGAGTGAGACTTCATTAAACGGAAGCGCGCGGAGA
GGAGAGACGGGGAGGAAGACGAGGAGGAGGACGAGGAGGAGGACGAGGCA
CAGAAACAGCAAGAGGAGGAGGAGGAAAGGTGCATTTCCACAAATGGCCA
AGCAAGTACGACGAGTGGATCCCTCTCCGAGCCAAACGCTTCGCGCCCCA
TAAATGCTTCACTGCCGTCACAAAGATGCCACAGGTGTGGTACGAAGGCA
AGATCATCGAACGGGAGGATGATGTCGTCAAGTGAAGAGGAGCCGGGTAG
ACGCCGGAAGCGCCGGTGTGTGAAACGGAAGGAAGAAGCAAAGGAGGAGT
TTATGAGAGCCAAGCAGGAACGCCGTGAGAAAAAGAGGGCGAGGGAATCA
TCGAAGAAAAATGATGAGGGACGGGCGGAAGAGCGTGGGGAGTGTGGGTG
GGAGGGCAGGAGGGAGGGCGGGAAGGAGGGAGGGCTTGCGTCGGACGGCA
ATGGTTGGGGGACGAGTAACGGAGACGGGAGTAGGGAGGAGGACAAAAGA
CTGGACAAGAAGCAGGGAGAGGACTCGGTGGGAGTGGACGACGATGCCGA
GTGAGACTTCATTAAACGGAAGCGCGCGGAGAGGAGAGACGGGGAGGAAG
ACGAGGAGGAGGACGAGGAGGAGGACGAGGCACAGAAACAGCAAGAGGAG
GAGGAGGAAAGGTGCATTTCCACAAATGGCCAAGCAAGTACGACGAGTGG
ATCCCTCTCCGAGCCAAACGCTTCGCGCCCCATAAATGCTTCACTGCCGT
CACAAAGATGCCACAGGTGTGGTACGAAGGCAAGATCATCGAACGGGAGG
ATGATGTCGTCAAGTGAAGAGGAGCCGGGTAGACGCCGGAAGCGCCGGTG
TGTGAAACGGAAGGAAGAAGCAAAGGAGGAGTTTATGAGAGCCAAGCAGG
AACGCCGTGAGAAAAAGAGGGCGAGGGAATCATCGAAGAAAAATGATGAG
GGACGGGCGGAAGAGCGTGGGGAGTGTGGGTGGGAGGGCAGGAGGGAGGG
CGGGAAGGAGGGAGGGCTTGCGTCGGACGGCAATGGTTGGGGGACGAGTA
ACGGAGACGGGAGTAGGGAGGAGGACAAAAGACTGGACAAGAAGCAGGGA
GAGGACTCGGTGGGAGTGGACGACGATGCCGAGTGAGACTTCATTAAACG
GAAGCGCGCGGAGAGGAGAGACGGGGAGGAAGACGAGGAGGAGGACGAGG
AGGAGGACGAGGCACAGAAACAGCAAGAGGAGGAGGAGGAAAGGTGCATT
TCCACAAATGGCCAAGCAAGTACGACGAGTGGATCCCTCTCCGAGCCAAA
CGCTTCGCGCCCCATAAATGCTTCACTGCCGTCACAAAGATGCCACAGGT
GTGGTACGAAGGCAAGATCATCGAACGGGAGGATGATGTCGTCAAGTGAA
GAGGAGCCGGGTAGACGCCGGAAGCGCCGGTGTGTGAAACGGAAGGAAGA
AGCAAAGGAGGAGTTTATGAGAGCCAAGCAGGAACGCCGTGAGAAAAAGA
GGGCGAGGGAATCATCGAAGAAAAATGATGAGGGACGGGCGGAAGAGCGT
GGGGAGTGTGGGTGGGAGGGCAGGAGGGAGGGCGGGAAGGAGGGAGGGCT
TGCGTCGGACGGCAATGGTTGGGGGACGAGTAACGGAGACGGGAGTAGGG
AGGAGGACAAAAGACTGGACAAGAAGCAGGGAGAGGACTCGGTGGGAGTG
GACGACGATGCCGAGTGAGACTTCATTAAACGGAAGCGCGCGGAGAGGAG
AGACGGGGAGGAAGACGAGGAGGAGGACGAGGAGGAGGACGAGGCACAGA
AACAGCAAGAGGAGGAGGAGGAAAGGTGCATTTCCACAAATGGCCAAGCA
AGTACGACGAGTGGATCCCTCTCCGAGCCAAACGCTTCGCGCCCCATAAA
TGCTTCACTGCCGTCACAAAGATGCCACAGGTGTGGTACGAAGGCAAGAT
CATCGAACGGGAGGATGATGTCGTCAAG
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Synonyms
Publications