|
|
Properties
| Property Name | Value |
|---|
| Product | dynamin GTPase family protein |
| Orig transcript id | gnl|cribi|Naga_101589g1.5286.mrna |
| Orig protein id | gnl|cribi|Naga_101589g1.5286 |
| Gene | RME1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:47480..49428 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6234 ID=rna6234|Name=rna6234|organism=Nannochloropsis gaditana|type=mRNA|length=333bp
ATGCTGGCCTTGCTCTCAGGGGAGTCCTACCTGGACGTGATAGCCCGGCT
CGAGCCCATCATCATCGAAATGGAGAGACATCGAGAGCCACTCCTCATCG
TCGGCCACCAGGGTATACTGCGCATCATCTACGCATTCTACATGGGCCTC
ACTCGGGCGCAAGCCCCCTACGTCTCCATCCCTCTTAACTGTGTCGTGCA
GCTCGAGCCGAGTGCCTTCCATTGTCACGAGGAGCGCCACATCCTCTATA
CTCCCACGAAAGCTCTCCCCACGGACGGGCAGGACGAGCCGATCAACAAG
TACGAGATGATGACCGACCCGCAGTCGCACTAG back to topprotein sequence of rna6234 >rna6234-protein ID=rna6234-protein|Name=rna6234|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MAVAGNLPFRGLDRFGVSFLNRFEGSVCPSEVLRNIHIVDTPGVLAGNKQ
TVARGYDFTNVCGWFAERADLILLLFDAHKLDISDEFKEVIEKLRGHDDK
IRCVLNKADQVDRQKLMRVYGALMWSMGKVMKTPEGEQGALRDGGERLDE
GFEGPAPKLCHAQDQRARQADAPLASTCLYNRVLEGADADIYGPGEDAGA
PPS back to topmRNA from alignment at CM002468.1:47480..49428- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6234 ID=rna6234|Name=rna6234|organism=Nannochloropsis gaditana|type=mRNA|length=1949bp|location=Sequence derived from alignment at CM002468.1:47480..49428- (Nannochloropsis gaditana)
ATGGCGGTGGCGGGAAACTTGCCATTTCGGGGATTGGATCGCTTCGGTGT
CTCTTTCCTGAACCGGTTCGAGGTAAAATGGGCGGGCGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGTGGGAGACCTGATTGGCAAGTCGACGCGGGGT
GGGATGTCTGTGACAAGTTCCAACAACACTCTCCCCCCCCCCCTGTTGTC
AGGGCTCTGTCTGTCCCTCTGAAGTGCTTCGCAACATTCACATTGTGGAT
ACTCCCGGGGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGCGGGTAATC
GAGGGAGGGAAGGAGGACGTGGGGGAGGGAGGGTTGCATGGACCAAAAGA
CAGGCAGTGTGTCCCTGATTTTCGTTCCCGTGATTCCCCGACGCAATGTT
GCCTTGCATTGGCTTGTACGCTCTCTCACCCCATCCTTCCGTCCGGGGTC
CTTTTCCATCATTTCCCACGTCATCCCTCTTCAGGTACGACTTCACCAAC
GTGTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATCCTTCTTCTCTTTGA
TGCGCACAAGCTCGATATATCCGATGAATTCAAGGTAGATCACGCCCCTT
CCTCCCCATCCCTCCCCCCCTTCCCTCCCCCGCCTTTCTTGTGCTATCGA
GCGTTCGTTGCGAGACAGCTTCGAGGAGATGGCATGGTGGGCCCCAACTG
TAAAGCGTCTCTTTTTTAAACCCTCCCGCATTTCCTTCGTCCCTCCCTTT
CTGCTATCCTTCCCTGTCTTATTGCTGCGACCGTAGGAGGTGATCGAGAA
GCTTCGGGGTCACGACGACAAAATCCGCTGTGTCCTGAATAAGGCCGACC
AGGTCGGTCGAGGACTGGGAGGGAGGAGGGCGGGAAGCATGGACGGAATT
CCTCTTTATCTCACTTGGATTTGGATTTAAATTTAAAATCTAAATTTGAA
TTTTTGCTGCCAAATCTTTAGGTGGACCGGCAGAAGCTCATGCGGGTATA
TGGCGCGCTCATGTGGAGTATGGGCAAGGTACTTGACAGACCAAGAAGGG
GATTGAAAGGGAGGCAAAGAGGGAGGGCGGTGGCACGAGGTTGGAATCTT
GGGAAGAGTCTTGGCAAAAGAAGACTTTCAGGAGCTTGTCTCCGGAGAGA
TGTGCCGTAATAAAATGCGGGCTGCTCCATGCCCTCCCTTCCTCCCTTCC
CCCCTTCCTCCTTTCCTTTCACCCCTCGCCAGGTGATGAAAACGCCCGAG
GTCCTGCGTGTCTACGTGGGCTCGTTCTGGGACCACCCCTTGATGTACAG
GGAGAACAAGGAGCTCTTCGAGATGGAGGAGAAAGACTTGATGAAGGATT
TGAAGGACCTGCCCCGGTACTTCCCTCCGACACACCCTCCCTTTGTTTTT
CTTTCCTCTGTTTCAACCCTACATTTCCCACCCTTTCCGTGTCCGCTGCT
GACGGGAAACTCCTTCGTTTTCAATCGCATTGCTCTTTCTTAACCTCCGC
CCGCCCCGTTTCCCTCCCTCCCTCCCTCCCTCCCGTCCACCCTCCTTTCT
CAGAAACTCTGCCATGCGCAAGATCAACGAGCTCGTCAAGCGGACGCGCC
TCTTGCGAGTACATGCTTATATAATCGGGTACTTGAAGGAGCAGATGCCG
ATATTTATGGGCCGGGAGAAGATGCAGGTGAGGGAGGGAGGGAAGGAGGG
AGGGAGGGAGGGAGGGAAGGCACGTGGGCATCGATATATGGTGGATGCGC
TGTGCAGGCGAGAAGGAAGGTGTTGTACGGGGAAGGGGGAGGGCAGGAAG
GTTGAGAAGGGTGCGGACACATTTGGAGGGCGTCGATTCTCCTCACGCCA
TTCCTCCTCCCTTCCTAGACTTAACCCCTTCCTTCCCTCCCGTGCTCTTT
TCCTCCGCTTGTTTCTCCCCTTTTTTGCCCAGGAGCGCCTCCTTCGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:47480..49428- >rna6234 ID=rna6234|Name=rna6234|organism=Nannochloropsis gaditana|type=CDS|length=5508bp|location=Sequence derived from alignment at CM002468.1:47480..49428- (Nannochloropsis gaditana)
GAGCGCCTCCTTCGTGAAAACTCTGCCATGCGCAAGATCAACGAGCTCGT
CAAGCGGACGCGCCTCTTGCGAGTACATGCTTATATAATCGGGTACTTGA
AGGAGCAGATGCCGATATTTATGGGCCGGGAGAAGATGCAGGGAGAACAA
GGAGCTCTTCGAGATGGAGGAGAAAGACTTGATGAAGGATTTGAAGGACC
TGCCCCGGTGATGAAAACGCCCGAGGTGGACCGGCAGAAGCTCATGCGGG
TATATGGCGCGCTCATGTGGAGTATGGGCAAGGAGGTGATCGAGAAGCTT
CGGGGTCACGACGACAAAATCCGCTGTGTCCTGAATAAGGCCGACCAGGT
ACGACTTCACCAACGTGTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATC
CTTCTTCTCTTTGATGCGCACAAGCTCGATATATCCGATGAATTCAAGGG
CTCTGTCTGTCCCTCTGAAGTGCTTCGCAACATTCACATTGTGGATACTC
CCGGGGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGCGGATGGCGGTGG
CGGGAAACTTGCCATTTCGGGGATTGGATCGCTTCGGTGTCTCTTTCCTG
AACCGGTTCGAGGAGCGCCTCCTTCGTGAAAACTCTGCCATGCGCAAGAT
CAACGAGCTCGTCAAGCGGACGCGCCTCTTGCGAGTACATGCTTATATAA
TCGGGTACTTGAAGGAGCAGATGCCGATATTTATGGGCCGGGAGAAGATG
CAGGGAGAACAAGGAGCTCTTCGAGATGGAGGAGAAAGACTTGATGAAGG
ATTTGAAGGACCTGCCCCGGTGATGAAAACGCCCGAGGTGGACCGGCAGA
AGCTCATGCGGGTATATGGCGCGCTCATGTGGAGTATGGGCAAGGAGGTG
ATCGAGAAGCTTCGGGGTCACGACGACAAAATCCGCTGTGTCCTGAATAA
GGCCGACCAGGTACGACTTCACCAACGTGTGCGGCTGGTTCGCAGAGCGG
GCCGACCTCATCCTTCTTCTCTTTGATGCGCACAAGCTCGATATATCCGA
TGAATTCAAGGGCTCTGTCTGTCCCTCTGAAGTGCTTCGCAACATTCACA
TTGTGGATACTCCCGGGGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGC
GGATGGCGGTGGCGGGAAACTTGCCATTTCGGGGATTGGATCGCTTCGGT
GTCTCTTTCCTGAACCGGTTCGAGGAGCGCCTCCTTCGTGAAAACTCTGC
CATGCGCAAGATCAACGAGCTCGTCAAGCGGACGCGCCTCTTGCGAGTAC
ATGCTTATATAATCGGGTACTTGAAGGAGCAGATGCCGATATTTATGGGC
CGGGAGAAGATGCAGGGAGAACAAGGAGCTCTTCGAGATGGAGGAGAAAG
ACTTGATGAAGGATTTGAAGGACCTGCCCCGGTGATGAAAACGCCCGAGG
TGGACCGGCAGAAGCTCATGCGGGTATATGGCGCGCTCATGTGGAGTATG
GGCAAGGAGGTGATCGAGAAGCTTCGGGGTCACGACGACAAAATCCGCTG
TGTCCTGAATAAGGCCGACCAGGTACGACTTCACCAACGTGTGCGGCTGG
TTCGCAGAGCGGGCCGACCTCATCCTTCTTCTCTTTGATGCGCACAAGCT
CGATATATCCGATGAATTCAAGGGCTCTGTCTGTCCCTCTGAAGTGCTTC
GCAACATTCACATTGTGGATACTCCCGGGGTGCTGGCCGGGAACAAGCAG
ACGGTGGCTCGCGGATGGCGGTGGCGGGAAACTTGCCATTTCGGGGATTG
GATCGCTTCGGTGTCTCTTTCCTGAACCGGTTCGAGGAGCGCCTCCTTCG
TGAAAACTCTGCCATGCGCAAGATCAACGAGCTCGTCAAGCGGACGCGCC
TCTTGCGAGTACATGCTTATATAATCGGGTACTTGAAGGAGCAGATGCCG
ATATTTATGGGCCGGGAGAAGATGCAGGGAGAACAAGGAGCTCTTCGAGA
TGGAGGAGAAAGACTTGATGAAGGATTTGAAGGACCTGCCCCGGTGATGA
AAACGCCCGAGGTGGACCGGCAGAAGCTCATGCGGGTATATGGCGCGCTC
ATGTGGAGTATGGGCAAGGAGGTGATCGAGAAGCTTCGGGGTCACGACGA
CAAAATCCGCTGTGTCCTGAATAAGGCCGACCAGGTACGACTTCACCAAC
GTGTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATCCTTCTTCTCTTTGA
TGCGCACAAGCTCGATATATCCGATGAATTCAAGGGCTCTGTCTGTCCCT
CTGAAGTGCTTCGCAACATTCACATTGTGGATACTCCCGGGGTGCTGGCC
GGGAACAAGCAGACGGTGGCTCGCGGATGGCGGTGGCGGGAAACTTGCCA
TTTCGGGGATTGGATCGCTTCGGTGTCTCTTTCCTGAACCGGTTCGAGGA
GCGCCTCCTTCGTGAAAACTCTGCCATGCGCAAGATCAACGAGCTCGTCA
AGCGGACGCGCCTCTTGCGAGTACATGCTTATATAATCGGGTACTTGAAG
GAGCAGATGCCGATATTTATGGGCCGGGAGAAGATGCAGGGAGAACAAGG
AGCTCTTCGAGATGGAGGAGAAAGACTTGATGAAGGATTTGAAGGACCTG
CCCCGGTGATGAAAACGCCCGAGGTGGACCGGCAGAAGCTCATGCGGGTA
TATGGCGCGCTCATGTGGAGTATGGGCAAGGAGGTGATCGAGAAGCTTCG
GGGTCACGACGACAAAATCCGCTGTGTCCTGAATAAGGCCGACCAGGTAC
GACTTCACCAACGTGTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATCCT
TCTTCTCTTTGATGCGCACAAGCTCGATATATCCGATGAATTCAAGGGCT
CTGTCTGTCCCTCTGAAGTGCTTCGCAACATTCACATTGTGGATACTCCC
GGGGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGCGGATGGCGGTGGCG
GGAAACTTGCCATTTCGGGGATTGGATCGCTTCGGTGTCTCTTTCCTGAA
CCGGTTCGAGGAGCGCCTCCTTCGTGAAAACTCTGCCATGCGCAAGATCA
ACGAGCTCGTCAAGCGGACGCGCCTCTTGCGAGTACATGCTTATATAATC
GGGTACTTGAAGGAGCAGATGCCGATATTTATGGGCCGGGAGAAGATGCA
GGGAGAACAAGGAGCTCTTCGAGATGGAGGAGAAAGACTTGATGAAGGAT
TTGAAGGACCTGCCCCGGTGATGAAAACGCCCGAGGTGGACCGGCAGAAG
CTCATGCGGGTATATGGCGCGCTCATGTGGAGTATGGGCAAGGAGGTGAT
CGAGAAGCTTCGGGGTCACGACGACAAAATCCGCTGTGTCCTGAATAAGG
CCGACCAGGTACGACTTCACCAACGTGTGCGGCTGGTTCGCAGAGCGGGC
CGACCTCATCCTTCTTCTCTTTGATGCGCACAAGCTCGATATATCCGATG
AATTCAAGGGCTCTGTCTGTCCCTCTGAAGTGCTTCGCAACATTCACATT
GTGGATACTCCCGGGGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGCGG
ATGGCGGTGGCGGGAAACTTGCCATTTCGGGGATTGGATCGCTTCGGTGT
CTCTTTCCTGAACCGGTTCGAGGAGCGCCTCCTTCGTGAAAACTCTGCCA
TGCGCAAGATCAACGAGCTCGTCAAGCGGACGCGCCTCTTGCGAGTACAT
GCTTATATAATCGGGTACTTGAAGGAGCAGATGCCGATATTTATGGGCCG
GGAGAAGATGCAGGGAGAACAAGGAGCTCTTCGAGATGGAGGAGAAAGAC
TTGATGAAGGATTTGAAGGACCTGCCCCGGTGATGAAAACGCCCGAGGTG
GACCGGCAGAAGCTCATGCGGGTATATGGCGCGCTCATGTGGAGTATGGG
CAAGGAGGTGATCGAGAAGCTTCGGGGTCACGACGACAAAATCCGCTGTG
TCCTGAATAAGGCCGACCAGGTACGACTTCACCAACGTGTGCGGCTGGTT
CGCAGAGCGGGCCGACCTCATCCTTCTTCTCTTTGATGCGCACAAGCTCG
ATATATCCGATGAATTCAAGGGCTCTGTCTGTCCCTCTGAAGTGCTTCGC
AACATTCACATTGTGGATACTCCCGGGGTGCTGGCCGGGAACAAGCAGAC
GGTGGCTCGCGGATGGCGGTGGCGGGAAACTTGCCATTTCGGGGATTGGA
TCGCTTCGGTGTCTCTTTCCTGAACCGGTTCGAGGAGCGCCTCCTTCGTG
AAAACTCTGCCATGCGCAAGATCAACGAGCTCGTCAAGCGGACGCGCCTC
TTGCGAGTACATGCTTATATAATCGGGTACTTGAAGGAGCAGATGCCGAT
ATTTATGGGCCGGGAGAAGATGCAGGGAGAACAAGGAGCTCTTCGAGATG
GAGGAGAAAGACTTGATGAAGGATTTGAAGGACCTGCCCCGGTGATGAAA
ACGCCCGAGGTGGACCGGCAGAAGCTCATGCGGGTATATGGCGCGCTCAT
GTGGAGTATGGGCAAGGAGGTGATCGAGAAGCTTCGGGGTCACGACGACA
AAATCCGCTGTGTCCTGAATAAGGCCGACCAGGTACGACTTCACCAACGT
GTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATCCTTCTTCTCTTTGATG
CGCACAAGCTCGATATATCCGATGAATTCAAGGGCTCTGTCTGTCCCTCT
GAAGTGCTTCGCAACATTCACATTGTGGATACTCCCGGGGTGCTGGCCGG
GAACAAGCAGACGGTGGCTCGCGGATGGCGGTGGCGGGAAACTTGCCATT
TCGGGGATTGGATCGCTTCGGTGTCTCTTTCCTGAACCGGTTCGAGGAGC
GCCTCCTTCGTGAAAACTCTGCCATGCGCAAGATCAACGAGCTCGTCAAG
CGGACGCGCCTCTTGCGAGTACATGCTTATATAATCGGGTACTTGAAGGA
GCAGATGCCGATATTTATGGGCCGGGAGAAGATGCAGGGAGAACAAGGAG
CTCTTCGAGATGGAGGAGAAAGACTTGATGAAGGATTTGAAGGACCTGCC
CCGGTGATGAAAACGCCCGAGGTGGACCGGCAGAAGCTCATGCGGGTATA
TGGCGCGCTCATGTGGAGTATGGGCAAGGAGGTGATCGAGAAGCTTCGGG
GTCACGACGACAAAATCCGCTGTGTCCTGAATAAGGCCGACCAGGTACGA
CTTCACCAACGTGTGCGGCTGGTTCGCAGAGCGGGCCGACCTCATCCTTC
TTCTCTTTGATGCGCACAAGCTCGATATATCCGATGAATTCAAGGGCTCT
GTCTGTCCCTCTGAAGTGCTTCGCAACATTCACATTGTGGATACTCCCGG
GGTGCTGGCCGGGAACAAGCAGACGGTGGCTCGCGGATGGCGGTGGCGGG
AAACTTGCCATTTCGGGGATTGGATCGCTTCGGTGTCTCTTTCCTGAACC
GGTTCGAG back to top
|