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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100239g5.3872.mrna |
| Orig protein id | gnl|cribi|Naga_100239g5.3872 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:865641..867103 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6215 ID=rna6215|Name=rna6215|organism=Nannochloropsis gaditana|type=mRNA|length=1313bp
ACACTACACTCGGAGCTATTCGCCCTCTCATCTGAGCATGGTTTCAACAT
TTTCTAAGGCTAGGAATGACGCACAACGAGAAAAGACAACATTGGCTTAA
GGAAGGCGCGATTGGTCTCGGCACAGGGGTCCTATATGGTGTCACGTCGG
TCGCCGTGGGCCATCCCTTCGACACGATCAAGACCAAAATGCAAGCTCAA
GAAGGATTCATAAAAGGCCCTGGGATGGTAAGATCCTTCAGCACCGTATT
GAAGACGCAGGGTCTACCGGGGTTATACAAGGGTGCGCTTCCTCCTCTCC
TCGGCAGTGGAGTCTATCGCTCCACCCAATTCGCCGTCTTCGAGGCCCTC
TATACCAAATGGGACAATGAGGTGGGCCGGGAGGAAATCCCACACACGCA
GGGGGTCCAGGTGCGGGTGGTGGGTGCAGCCGTGGCAGCGGCCACGGCGC
GGTCGTTGTTGGAATGCCCTATAGAGTTTGCGAAGGTGGCGAGACAGACG
GGGCAGGACTGGAAGCTGGGGCAGGTGTACAGAGGCTTCGGCTTGCAGCT
GGGCCGCACAGGAGGCGTAATGACCACGTATTTCGTCACCGTCGACGCGA
TCCGACGGCATCATCCTTCGGTGTTCGAGACCAAAATTGGGCAATTTCTC
GCGTCAGCTGGTGCGGCAACGTTCGGCTTTTGGGTAGTCTGGCCGCTTGA
AGTGCTGAAAAACCAGGTCACTGGTCCTCTTAGGCTCTTTTCCTCCCCGT
TGTCCTCGTGGCAGTCCCTTTTCCTTGTGTTATTTTCCTCCTTCTCCCCA
GTCCATTTCTACCGTATTTTCCTCCGTTGTACTCGTAGCTCCGTCCTATT
CTTTGGCTAATCCCAGTCCAAGCTCTTTCAACAGAGCGAGATGAACCCGA
GGGTCCAAACTCACCACCGACGCACTCCGATGTTTCCAATGTACCTCTTC
CCCATTTCCCCGCCTCCTCCCCCTTTTCCTCTTTCTAGGTTCAAGCCGGC
ACCCCCGTGGGTCCGCGGGGCAGGGAGGCCACCCTGGTCGACAGGGTGCT
GGCCCTTGGGAGGGGGGGCCTCGCGGGGCTGTACAGGGGAATCTTGCCCG
GAACACTGCGCTCGGTCGTCTCTAACGGCTTCAGCATGGTGGTGATGATC
GAGGCCCAGAAGTGGGTCACGCGATTAGGACTCCGGTGACAAAGCGACGG
AGGAAGAAGGGATGTAAGGGGGGAAAGAGGGGAGGAAAGGGGGAGGGCGA
GTGGAAAGGCTTGTACAATGGCTCCGACTGAAAAGAAAAAAGCCACCAAA
AGAAAAGCATACC back to topprotein sequence of rna6215 >rna6215-protein ID=rna6215-protein|Name=rna6215|organism=Nannochloropsis gaditana|type=polypeptide|length=290bp
MLKVAVLILSLASLGLSAADELVPTRDTTSSPSGSLRGSNSILNVTNESE
VEPRRVPEEFSCVGSICTTLATVRLSQAGPEQKQEALEVRHRGDAERIPR
TMKAGDVKSASTSLSPVPGIAALETSGRGGKALGAADGPTCKGVKCLMPA
MPPMVAQPVAQPLAPSNGVVMEERNDTNANSTSSITTTTTAADGTTISSS
LICTNSRCVLCSEGLCKVAEPDMQGNSTALSMTGPGTRVEITCKDSVCVT
VTTERAANGTLSSTTTQATTKSVPFRGTTTKSGEGIGDSG back to topmRNA from alignment at CM002467.1:865641..867103- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6215 ID=rna6215|Name=rna6215|organism=Nannochloropsis gaditana|type=mRNA|length=1463bp|location=Sequence derived from alignment at CM002467.1:865641..867103- (Nannochloropsis gaditana)
GTAGGACATTTTTCGAGTCTTTCAGGAACTAATGGGGAGTCACGCGTGGA
ACGTTTCTGTGGCACAGCGACGAGGCCGACGCCACCGGTGCAGGAAATTT
GGTCCCTGGGCGTATATATATATATATGTATTTCCCGCTTTTACAATTTG
CCGTGTGTCCACTAGTACTGATGAGGAAAGTGTACGCTTGGAAGCTGAGC
CTCCAGAGTGAGGCTGGACATTTCTGTGGTTGGCGTTTATTACCGATTTA
TGTAGCTAGCGGGAGCGTGGCTTACCTCCCTTGACGCCGAGACATAATCC
TTGCTTTTCCATCCATTGCTGAGGAAACTTGCGCTCATCACTTTTCACCT
CTCTTCTCCTCCAGATCAAAAGCTGTCTTCTTCCTATAATCGGTGCGTCA
CAAAAATGCTGAAGGTGGCAGTTCTAATCCTCAGCCTGGCCTCCTTGGGG
CTCTCGGCTGCGGATGAGCTTGTCCCGACGAGAGATACCACATCGAGCCC
TAGTGGGAGCCTACGGGGCAGCAACAGCATCTTGAATGTGACGAATGAAT
CAGAAGTAGAACCCCGTCGGGTGCCGGAGGAGTTTTCATGCGTCGGGAGC
ATATGCACGACCCTCGCGACGGTGAGGTTGTCTCAGGCCGGTCCTGAACA
GAAGCAGGAGGCGCTCGAGGTGCGTCATCGTGGCGATGCCGAGCGAATCC
CACGCACGATGAAGGCTGGAGACGTAAAAAGTGCGTCTACCAGCCTGAGC
CCAGTACCCGGGATTGCCGCTCTGGAGACGTCTGGGCGAGGAGGGAAAGC
CCTCGGAGCCGCCGACGGCCCCACGTGTAAGGGCGTGAAGTGTCTGATGC
CCGCCATGCCACCCATGGTCGCCCAGCCTGTGGCTCAGCCCCTGGCGCCT
AGCAACGGGGTCGTAATGGAGGAGCGCAACGATACGAATGCCAACAGCAC
CAGCAGCATCACCACTACCACCACCGCCGCCGACGGCACCACCATCTCCT
CCTCCCTCATCTGCACCAATAGCCGGTGCGTGCTTTGCAGCGAGGGACTG
TGCAAAGTCGCCGAACCCGACATGCAAGGGAACAGCACCGCCTTGAGCAT
GACTGGGCCTGGCACACGCGTGGAGATCACCTGCAAGGACAGCGTGTGCG
TGACCGTGACGACGGAGCGCGCGGCCAACGGCACGCTCTCGTCTACCACC
ACCCAAGCCACCACGAAAAGCGTGCCTTTCAGGGGGACGACGACGAAGAG
CGGCGAAGGGATCGGCGACAGTGGCTGATATTATGATGGTGTCCCTTTTT
TAAAGCGGGCGCTCGGCAGCCGCCAAGCGGCAGTGTGCAGAGGAAGGGTA
CAGGAAAAATGTATGTCGGGTTCATACTTGTCTTATCTTAAAAATGACTC
GGATCGAGAGAGAAGAATCTTTGCATGTATACATGGAAAAGTAAAATTAT
CGTCATCTCCTGA back to topCoding sequence (CDS) from alignment at CM002467.1:865641..867103- >rna6215 ID=rna6215|Name=rna6215|organism=Nannochloropsis gaditana|type=CDS|length=873bp|location=Sequence derived from alignment at CM002467.1:865641..867103- (Nannochloropsis gaditana)
ATGCTGAAGGTGGCAGTTCTAATCCTCAGCCTGGCCTCCTTGGGGCTCTC
GGCTGCGGATGAGCTTGTCCCGACGAGAGATACCACATCGAGCCCTAGTG
GGAGCCTACGGGGCAGCAACAGCATCTTGAATGTGACGAATGAATCAGAA
GTAGAACCCCGTCGGGTGCCGGAGGAGTTTTCATGCGTCGGGAGCATATG
CACGACCCTCGCGACGGTGAGGTTGTCTCAGGCCGGTCCTGAACAGAAGC
AGGAGGCGCTCGAGGTGCGTCATCGTGGCGATGCCGAGCGAATCCCACGC
ACGATGAAGGCTGGAGACGTAAAAAGTGCGTCTACCAGCCTGAGCCCAGT
ACCCGGGATTGCCGCTCTGGAGACGTCTGGGCGAGGAGGGAAAGCCCTCG
GAGCCGCCGACGGCCCCACGTGTAAGGGCGTGAAGTGTCTGATGCCCGCC
ATGCCACCCATGGTCGCCCAGCCTGTGGCTCAGCCCCTGGCGCCTAGCAA
CGGGGTCGTAATGGAGGAGCGCAACGATACGAATGCCAACAGCACCAGCA
GCATCACCACTACCACCACCGCCGCCGACGGCACCACCATCTCCTCCTCC
CTCATCTGCACCAATAGCCGGTGCGTGCTTTGCAGCGAGGGACTGTGCAA
AGTCGCCGAACCCGACATGCAAGGGAACAGCACCGCCTTGAGCATGACTG
GGCCTGGCACACGCGTGGAGATCACCTGCAAGGACAGCGTGTGCGTGACC
GTGACGACGGAGCGCGCGGCCAACGGCACGCTCTCGTCTACCACCACCCA
AGCCACCACGAAAAGCGTGCCTTTCAGGGGGACGACGACGAAGAGCGGCG
AAGGGATCGGCGACAGTGGCTGA back to top
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